Contig Data
morexGenes
Links



Map Locations of contig_1563409 (4327 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1563409

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12495 5 1299 bp AK363651 Available Available None





CDS Structure of MLOC_12495






Contig Sequence (4327 bp)

>contig_1563409 4327 assembly3_WGSMorex_rbca.fasta
CCCTCGGTGAGAACAAAGCCTTCGGTTTCGCGCCACAGCAGCAAGTATTGGCCTATTTCA
TGGATGCCTAGGTGGCCGTGGATGTCTCTAGCCCAGGTGTGGTTGAGGAGGCCTTCTGCA
ATGGTGCGCTGCTTGCGCCGTCGTTTGGGGATGCAAGCGTATAGCCTTGGCGCGACCTCC
CCGTTCTGCCATCCCCCACGGCCAGAATTGGAAGGACACTATTGTTGCCTTTAGATGTCC
CTCCAAAATTAATGCCATGCATTCTTTTGTATATCATTCAAGACTAAAGGAGAAACTACA
TGTTTACAACACGAAACAGTATTCATTGACATAGGGTTAAAGCACCATACCTTGCCTTTT
TTATACTGGGTCATGTCAGCAATGCAATACCTGCCTCAAGTTAAGGACCCTAAGCACATT
ATAGTTAAGTCTTACAAAATTAAATAGAACAACACACACACATCAAATACAGCCCCCATT
TATACAAGCAATGATCAATACTGATTGACAGAAAGCACAAGTTCATGAGGCATTGAGGTG
AAATCATGAAGCACTTAAGTCTCCATGCAGAAGAGCATACCAATACAGAGGACAGGAAGA
GATATATGCTCTTTACAGGTTTAAGATACATTCACATGCCTTATGCATATTTACATTACC
AAACTATTAAATAATTATATGTAATGACATTAGCATCAGCATACATGAACTTGTTATTTC
ACAAAATTATCTGAAAAATATGCCATGTACTGACATTTCCTCATAGAAATAACATTGCAA
TCCAAAATATACTAAAAATGGATACTCTTTAAAAAGCTTGTCATAGTAACGTTTGACCAG
CCTCTTCTCCCAAGTTGAATCCATGTCATCCTCCTCGGAAAGAATGAACCTTTCAAATGT
TAGAAGAAGAAAAGTGAGGCATGTATGAAATTATGAGTTTCCTAAAACCACAGGCATATG
TTAATAGGACGTGGTTCAGACCTGTATCCTTCTCTCAATGTATCTTTATCAGTTTTGATG
GGCAGACTGTTATCCACATTTTTCGTGTGGCCATAAAACTGAACTGTTGAAAGGTAAAGA
CATGTATCACCGTATCAGTGGCACACAGAAAATGAATGATGGATATCTTGTACGCTAAGG
TTAAAAGAAATGTAAGGTTGAGTGTCCGATCTCCAATTCTTTCTACAACGAAGGGATCTA
TTGTTTCATTCCACTATTTTGTGATATTGGGATGCATTAAAAGAAAAGTTTTGTAATGAA
GCGGTGATCTATCTATGTGTTGACATTTGGCAAACAAAAATGCACCATTGCACAGGATTG
GTTATCAATATATTGGAGACCCGGACATAAATCCTATGTTAAAGATGCATATTAGAATGT
TATCTATATTAAGCTAGGTAACAGGTTACAGTAGAAATACACAATCCATGTATGGATGAA
GGTAGCCCCCAATTATTCCTTAAGTAGAGTGGACTGTTCATCATTCAGTTTCTTTGGGAA
ACCAAGGCTGAGCAAATAAATAGCTCATTATATGCCATTGCCCCAGTTTCCATTTCACTA
TGAAAGGGCAACTCAATCATCTATCCACACGTTTACAACGGGACAAGGTAACAATATGTC
ACAATTAAAGGCACTACTGAAGCAGGCTCATCAACATACTAAATGATTGCAATCAACTAC
AATGGCAGAAGCCTACACACGTGACCAGATTCTAGTGCGATGGTTGCTCAATTCCACACA
GAATTCAGCATTTGAAATAACTAGCAATAACAGGAGCACGAGAAGGCTGCGGGATCGATT
TTGGAGAATCGATGGCTATGTTTGTATGTGGAGTTGCAGCAGACCTGCAAGTGTTTTTTG
CATACTTAAAAGTTACGACTTAAACGTGTCCCCTGTTTTTGAACACTATTAGTGCTACCA
ATTATAATTTGGCTTGCCGAACTCATGATTCATTACCATGCCATTTTATTCCCAAACCAT
TTTGCTGAACTAACACAATTCCAGAATCAATCAGCAAAAAGGGGTAGTCGTTATGTTACC
TGTCTATGGGTTGACATTGGGCAAAAAAAGTAAATCCCATATTAAAAATCTATATTAGAA
TGTTGTCCGTATTAAGCTAGCTGACAAGTTACACATAGAAATACAAAATCCATGTATGGA
TGAAGGTAGCCCCCAATTATTCCTCAAGTAGAGGGGACTGTTCAACATTCAGTTCCTTTT
GGAAACCAAGACGAAGCAAATAAATGACTCATTATATGCCACTGCCCCAGTTTCCTTTTC
AGCATTGAGACAAGGTACAAATATAGTATTAGACTTAAAGCTACTCTAAAGCAGGCTCAC
CAGCACAATGAATGGTTGTGATCAATTACAAAGCCAGAAGCATATATAGTAGTTGTGGTG
TGTTGGATGCTGAATTCCATACAGAGGTCGGCACTTGAGCTAACTAGTAAATAGAAGCAC
AAGAAGTCAGCCGGGCCAATTTTGGAGCACCATGCTGAGTATGTTTGTATGTGTGGTTAC
ATCAGAAATGCAAGTTTTTAGTGGACTTGCAAGTTACAAATTTTGCCTGTTCTTTGAACC
CCCACCACCAAGTATAATTACGTTTATACCTAACTCATGATTTCGTTGCCATGCTATTTT
ATTCTTTCAACCATAACCAACACAAATCCAGAGTCAATCAGAAAAAAAATGGGGCAAAGA
TAATAACAGCATGCTTTTGTAGGAAACAACAGCAGCAGCAGATCATACCATAATCCTTCA
TGAACTTCTTATGGCGATCGTACGCGTTGAGCCCCCGGATGTGCGACTGGTACTGCCTGC
ATCCATCAATTCGACATCCACAGTTGTGAAGCAACAATTCAGCCTATGAAGCACAAGCAA
ACTAACGAAAAGACATGCCCAATGGCCAAAAACCATTGCCTTCGATTAGCACACTAGGAT
ACCCTAACGTGTACAAGGCGATTAAGGGTCAAGAAGTAAATTACAGTTCGCGGACACGTT
TTTTTTTTTCATATCACCAAGATTAAAAAAAAAAGTAGTAAACCGTGCAGAACATTGTAA
AACACATCATTACTTCTGGAAGGAGATTAGTTTGCGTATCCTCGAGAATTATAAAAGTAG
TATAAACCATGTGGGCATTGTATCATCGATATTTATAAAGTAGTAAACCATGTGAGCATT
TCTCGTTAACAGTCTTAACAGCACTGAATTCAGAACACAAAAAAGCTAGGGTTTTTATAG
CCGATTCAAGCAAAAATAAAAATAAAAATAAAAATAGAAGGCAGCAGATCGACGAGTGAT
AAATCGAAGAAGGAAGATAGAGGGACCCAGAGATCCTTACATCTTCCTCTCCTCCTTATC
GAAGATGGTGGATTTGAGCCGCCCCAGCGATGCCATCCCGCTCCGCCTCGGCCTCGCCTC
GTCTGAGCTCCTCAGCAGCCGCGGCCAGCGCACGAGCACCAGCCTACCGCCAGGATGCCG
CGCCGGGATTTGGGGAAGGATGGTACGCGAGCGCCTGGTGCGGCGGCGGTGGCGTCGACG
GGGGTGTCTGAATGAATAGGGGCGCACTGCTGGGCGCTGGAGGGTGGCAGAAGGGAACCA
CGATGTGGGCCGCGGGCCGCTCTTGGACCAACTTGCCGAGTCCGCTAGAGCCCATTTCAC
GGGCTGGCCTTTTTAGCAGCGGAGCACAAAGGGGCCCCTGTACAAAGGGCCAGACCACCT
CACGGGGTTCATGGATGACTAGGAGGGAAATGGAAGCCGGCGTGCTGAGTTTTTGTCAGT
CCACTGGGATATCTTGAAGGATAGCTGGAATGAAATGTTTTCTGAAGCAAGGGTTGAACA
CTTGAAATACCATAAACCTTATCATAGACCGCTGCTGCTGCATTTAAAAGAGAAAGTGAC
CCGTGTGAGCACTGGACCGGCTTTTCTCAGATTTGAAGCTCCGCGGCTGAGACAGTTAAA
TTTCCGGAATGTGGTTGAAGAAGCCTGACAAGGCATAGGGTTGAATGATCAGAATGTTGG
ACTAGCAGAGAAACTGTCCAGGTACATAAGGCTCTAAGCCATTGGGATAAGACCACTAGT
ACAAAAGAGAGCTTTAGTCCAAGGTCTGCAATCCCATTAGTCTCGGTTCATTCACGAACC
GGGACCTATGGTGTCATTGGACCCGGTTTGTGAGACCAGGGCGTCGGCCGGGCATCGTGG
GTCATTGGTCTCGGTTCGTGTCACCCCTTTGTTCTCGGTTTCATACACGAACCGGGACCA
ATAGGCCGGAACCGTTCATATCCCCCTTTACTCTCGGTTGGTGGATCAAACCGGGACTAA
GGGGGGG