morexGenes - Barley RNA-seq Database

Contig contig_1563267
Source Contig contig_1563267
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1563267 (8718 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_1563267

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_12429	4	1734 bp	MLOC_12429.3	Available	Available	LOC_Os12g23280.4, FRAME:-1, EVALUE:9e-29, 13112.m08914 protein heavy metal-associated domain containing protein, expressed
CDS Structure of MLOC_12429

Contig Sequence (8718 bp)

>contig_1563267 8718 assembly3_WGSMorex_rbca.fasta
GACTAAGGGGTCCCGGCCAAAGGCCCGTTTTCCACTAGTGCAATGTAGTTATTCAGTTTT
CCACTAGTGCAAGGCATATGGATTTCACGAGGATATGAATATAACCTTCGATATTCGTCC
TCAAGATGATATTGAAGGTAATATCGACATTTTGGTGGATGCCGATATGCTTCCAATTTT
ACCTCTATGTGAGTTTTACAACCATATTTGTTAAGTTATTTGCATTGTTTATTTAAAAAT
AGTTGGTGTTCATCCCTACTTAACTTGTTTATTTTTAACTGGTAGCTTATTTCCTTTCTT
TGAGTGAAACACGGAAGATAGTAGACAATACACACTACACTTATGGATCACATCTAACTT
GGGAGGAGAAGGATTCTCTTGTCATCTTTGTTAATGGTTGCCTGTCTACTAGGGACAACA
CGCATTATGGAGTTGGCCCAAATTATACATTATACATGCCACTAGTGCATAGGTTGATGG
TTGATGACATTCACGCAAATATCTTGGTAAGAGTTGCTAACTATATTGTTATTACGTAAA
TTACACTACTAATTATGCTACTATTATGAAATTGCATTGCTAACTAGGCTACTATTATGT
TCTTTAACAAAAAATATCAAATGATGTTGTGCCTCAGTTGACGTATGGTGAAGGTGAGAT
GGCAATTACAAGCCGTAAGTGCGTCCTTTTCATTTTTCAATACTCAATTGAGCACAAACC
ACGAGGAAAACTCTAAATTGAAGCATAGAAAGAAATAAAGAAGGATCACAAGCCACAAGT
TGAAGACCGTTGGATGTTTTTTGCTTCATCATGGAGACTTAGATATTTTTCTTTTTTATG
ACATTTTACCTAGGAGAGAGGACTAGGTCGTGTGAGGGAAAAGTTTTTCTGATTTATATG
ACATATATTAACTTGGCATGATCGATTAGGATGATTATTATTATGGTGTTTTCTGTTTTA
TGACATTTAACTTGGTATGATTAAGATGATGATGAGTTGTTAGATGATCAAGACGATGAT
AAATTGTTAGATGATTAATAGGATGATCAGTTGTTAGATGATTAAGAGAATGATAAGTTA
TATGACATATATTAGATTAAATTGGATGGATGCAAGTGACCAAGTTGAATTAGAGAAAAA
TATGATGTTGCGATTCGCGGCATCGTATTTTTCTCTAACCGAGCTTGATCACTTGCACCC
GTCCAATTTAATATTGATGTTTTTTCTTTTATAAATTTTATTGATAATGTATATTAATAT
GTATAACCGTGTGTAAATACAATATAAATATAAAAAATAAATATGCGTGTTTAGTAGTGA
CGCGGTTTCTAAAAGCTCCCTACTGCTAAATGCGTTTAGTAGTAGCGCGTGTAATAAAAG
ATCGCTAGTGCTAAAAGCGTTTAGTAGTAGCGTGTGTTATAAAACCGCGCTACTACTAAT
CCAGTTGCCAGTAGCGCTGGGTAACCCGCGCCACTATTAACCCAGTTGCCAGTAGCGCTA
GGTAACCTGCGCTGCTGCTAATAGTTAGCAGTAGCGTCGTAGCAGTAACGAAGCCCCACG
CTACTGATACGTGTATAACCCATGCTACTGCTAGGCTTTTCCCTAGTAGTGTTGAAGGAT
GATCATATGATTCTACTATATTAGCTTTATTGAGAGATTACACTACTAAAACTATGAACC
CTAGAAGTTATTTTCAAGCATTTATAGAACGTTTTACTTGCTGTTTTTACTTGCTACCTT
ACTGTTTTTATACTTTCAAATTACAAAAACTATATCTACTATTCAATTTATGTTGTGTAC
TATTTACTATCAAATTTGTCATTTATGTTTGTCAAGCTATGTTTTGAATTTCGATTTCAA
ATTTTATGACAACATACAATGATATTGTGTCAATGTGTTGGATTTTTTTTCCATATTTTT
TCATACATTTAAAAATGTGCTATCGAGTTTGAAACACCGGAAGCACCCTAAGGGTGGGTT
GGGAGTACAGGACATTCTAGGTCAGGAGATGCCCTCACTGAAAACGTGGGAGCGAAAAAC
AAACATGTCTATTGGGAGAGAAGAAACTTCAAAGATAGCCATGATCGAGAAGGCTACGTC
CTACATGTAGCTCCTCTTGCGGCTGCGTGCAGCTCCGCTGGCAACGTCGATCAGTCAACT
CCACTGTTGAAAACGAGTGGACGCTTTCTTGTGTTGCATCAAATCCTACGCGGCATGGAT
GGGTACATTCTCATCATCCGCTGGTTGATTGCAATCATATCGATCTTGATCGCAGATGCC
CGTGCCGTACGTAGCTACGACGTCTTACATGTGCTTGGTAGTCACAACAAGTTAACTATA
TAGGACCGTAAAAAGAATATAAAATGGCGATTCTAGAATCTAGAAGTTGAGGAGAGAACG
ACTGGCCCTGCATCTTCTTCCTTTTACGTCAGTGTCTTCCTTTGCCTCCCCACAAATAAA
AAGTACTGTATCTTCCTCTACAGGTGAACAGCAATTCAGTGGCGTCCATTCAAACAAGTC
ACGTAGCGAGTATTTCCACAGTATGTACGTGTATATGTTGGCGCCTGCTGTTCTTACCCA
GCTATCTATCTTGTACAGGGAAAAGCAGCAGCCGATGGAGGCAGACGAAAAGCCGCAGCA
GGTATTAAGCAACCAAGGCTGCAGGTAAGGTTAACTAAATTCCATTTCCTCCATCGCCAT
CGTCACCGACCACAGCACATTTCTACCGACGCCACAAATTAAAACCGCAGCTCCACAATT
CATCAACACATCACCACCGACTCCTGATCTAGACCCATTTCTTCTTATTATTGTCATGTC
AGCAGGCTGAACTGTGTAGCACGCCTCCGTTTCCATCTGAGCCCGAAAGCTGGACGTCGC
CTTCCGCTAAGCTGTTCAAGATCTGGTCCTCGGGTGTAGAAAGAGGTGCCGGTGGCCGAC
GAGACTCGCCGGCTGTCGTCTGTCGTCAGGGGCGGGGAGTGGAGACGAGCAGCCGTCGCC
GTCATCCGACTCATCGGCACCGCGAAAACCGGCCAAGCCAACGACGAATTTATACTCCCG
TTTGGTCAGGGGTACGGCGAGGACGCAGCCGGACGCGACGCCGCAGCCATTCTTGACTGC
TACGTTTTGTCCGGCTCTGAATTTAACCAGCTATTTTACCCTGCCGTCTTTCGCTGCAAC
TTGCAGACTTATGCAGTAATCTGGGGTCTGACGGTGTGATTTGCTTGATAACAATTAATT
ACTGATAAGAGTGCACACGCATGAACTAGTTAAGTGATCTCAGGTGGCCATCGACCCTTT
TGGCTGGCATGCATCTAACCCTTTTCATATAGTATATCGTGGCCGCGAACCGACTCGATT
AGCCTCGGGTTTAAATAGTGGTCAGAGTTTGGTGATGGGTGCACTAGCTAGCTAGACCGA
AAATGACATGCACGCATGGCCACTTGAAATTCCCTTCGACATTTCTGTGGCTGCTTCTTC
TCTTGGAAAGCATAGCGTCTTTCGGCCATGGCGGATGGTGATCTAAGACGAGGAGAGAGA
CGTATTAAGCTGGATCAAAAGATCAATTATTGAGCATGATCACCTCATGATAGCGTCGTC
TGACGACATGTTTCATTCAGCGCCCCGTTGCTCTTTTTTGTATCAGATACAGATCGACGC
GTCGGCGCGCGCGCATGCCTTGCTGCGTCACCATTATAATTTCTTTATCCGATTTTGTCT
TGGTGTACCAACCAACACATTCTAATCAAATTGTTTCCTTGCGAGAACTGGTGACTAATT
ATAATTAGATGGCTGCGCTGCGTGCATCTCACCCCTTTTTTCCGTAGTAAAAACGAACCA
GCTAGGGTTAGATCGATACTGATATGCGGTTCCTTTTTGGCGGGAAGATGCTCATGTGCA
GTTTTAGTTTCCTCAGGCCACTTCTCCATTAATCAGGTGAAATTATATATAGCACACTGG
TTAAATGGATCTTCCATTATTCTGACTGCGACGAACTCTTGTCCCCCTTTGAATTCAAAC
ATCGCGTGAATGTTATGCATTGCATGCATGCGTTGATCAAAGAACGAACAGAGAAGAAAA
TAAGTGCGATGCATCCAGCTGGGGGGTCGGGTCAGGGTGAGCATAATTCCGATTCTCACC
AACTGGAACTGTACGGGCGAGAGATCTTTCCAATGGCTGCTGATTCTCATGGTCCTATAT
ATACACAGTATTCTGTACAATGGCGCCGCACATGCAAGATGCGCCTGGCTACAATTGCAA
GAGAAAATGCCAAAAATAACCATATTATTGCGCCTCATTTTCCCTTTCTTCTAGAAAGCA
AAGTTTGAACAGCAGCCACATGCTGCTGCATTACCACCCATCATGCACCGCACACTGCTC
TCTCTCTCTCTCTCTCTAAACCCACTCTTTCTCTCTCTACTTTTGTGTTTTGTTCTCTAT
TGTTGAAAGGAAAGATGACGCAACGGCAGTGTGTACAAGGGCAGGCAGGCAGTACGTAGC
ATCGCAATTTCAAAATATACAAATGTACGTACATAAGTGCTATAGTAGAGAGCAGTAGAC
TACTAGCTAGTTGTACAGTTTCATCTTGCAAACTTTGTTGGTCTCGTAAAAACGATCGAG
GAAATACTATACACAGAGGCAGAGGCATGCACGGTCACCCCGCGGAACGTTGGCGAGCAA
GGGTCAAGACGCACGCACGCACGCGCGACTCCGATTTAGCAGATGGCGCACGAGTTTGGG
TTCTCCTCCATGCTCATGTTCCGCACGTAGTAGTGCTGCGGCGGCACGTACGGCGGCGGG
TACGCCGGCGGCGCCGGCCGGTACTGCTGGTTCATCATGTAGTCGGCGTTGTACATGTAG
GGCGGCGGCATGTGGTGCGGCAGCGGCATGTGGTGCGGGAACGGCAGCGGGGCCACGGCG
GCGGGCTTCTTGTCGCCGTCCTTCTTGGCCGCCGCGTCGTCCTTCTTGCCGTCGCCATCC
TCCTTCTTGTCGCCGTCCTTCTTCCCGCCGTCGCCCTCCTCCTTCTTGTCGCCGTCCTTC
TTCCCGTCGCCGTCCTTCTTAGCGTCGCCGCCGTCGCCTTCCTTTTTGGCCCCGTCCCCG
TCCTTCTTGGCCTCCTCCTTCTTGTCCTCCTTCTTCTCGGGCTCCTTGGCCGGGCCGACG
GACTCGATGTAGGCCGCCCAGCCCTTGCGCAGCTTGCTCACCACGTCCACCGGGTCCACC
GTGCCGAGCACCGTCATCTTGCGCGACGCCATGTCCATGGAGATGGCGTCGATGCCTGGC
GAAACAGAGCGGATCAGAGACCACGTCGGCGTCAGTCGATCGGCCAGTCTTTGACTAATG
GATTCATCGTATAAAAATTAAGAACAGAGCAACGCGGAGTGCGGGTGAGATGGATGCGGC
GTGCATACGTACCGACGAGCACGGAGACGGCCTTCATGGCCTTCTGCTTGTCCTTGTTGT
CATGGAGCTCCAGCTTCACCACGATCTTCTGCAGCAGGGCAAACGCGCCAGCATGGGCGC
GACACAGTCAGTCATAGGAGCAGAGGAATGCATGACTGACACACAAAAAAAAACGACACC
AGACGAGAGCAAAGTGCAGGTGCAGAGTGAAAAGAGAGGAAAGCGTTCCCGGGATTGGAT
TCTAAAGCAAGATCCCCGGCCCATGACGGAGAAGTCCGATGGAGCAAAGAACATGCATAC
GTGCGTTGGTGGAATCAGGATGGGGATCTCAGAATCAATCCATGAGCATTACAGGTAGAA
GTCGCTCACCTTGGCCGCCATGGCTCCGATCCGGCCTGGGATGGATGCTCGCAGAGATGG
AGAAGGCGATCGGAAGATGGATCAAACGGGGACAGGTGAGAATAATGGGAGTAGCTAGCT
AGCGAGTGAGGGCGTGTGGGAAACTGGGCACGGCAGGCGAGCGTGTCACGCAACAGCGGC
GGCAGGACACAAGAGGCAAAGGGAGTTGCCGATCGGGGGGTGGTCCTAAATACTAGCGGC
GAGGAGAGGAGGAGGCGCCATCGGCGGGCACTTTGGTGGCTAGCTACCGAGTGTAGCCTA
TAGGTAGCGTTGGTGCCAAGCGCAGCCCCAGCCCCAGCCCCAGTGCGTAGTGGTACGTCT
GTCTAACTCTATCTATCTATATCTGCCTGACGTGGACGCGTCTCTCTTCCTCACCGCGGC
GGCGGGCCTCCTACGTCTCCCGCCTTTTGGTGTCTGGCCACCGCCCAGCCGTCCCGCACA
ATGGCCGTTCTACTGCCTGCTCGGATCCGTCAGTCCCCACGCCGCCGTGCGCTCCGGCCG
TCCGAGCTCCGCTACCATCCTCCTCATGCTCTGTTGCCGCTGCCTCTGGTGCGGCGTCCT
CTGATCCTGATTCCCGGCGGAAACCTTCCGCGACGAGACGAGGCGGTAGACAATAGCTAG
GCTTGTCACTCGATCGTCGCGCGCGCGCGTTGTGGGCTGTGCGTGCGTGACCGACCGGTC
ACGCTCGCTTTTATCTCTCCTACGTGAGAGGTCGATTCCATTCCCGGGGCTGCGCACGCG
CGCCGGCCGGCCGGCCGGCTCGTGTCTGCCTTTGCGCCGGGGCTGCGCGTTGCGGCTCGG
CTGGATGCTAGCGGGACGGGACGATTCCCGCCGTCTCCGTCTCGTTTTCTCGCGGATTCC
GAGGCGATTCCAACGTATGACTCGTCCCAGCGGTTCTCTTCTAGCAGTTGTGCTGCGTCT
ACGTAACTACGTCTGGGCCGGGGCAGGGGCCGGTTCTAGACCGTGTGTATACGAGCAATG
CTGCGTTCGTTGAAAACTTGGGTGCGTTCGTGCATGTGGTTTGAGGATGAGGACCAATCA
GCGAGGCCTTTTTGCGCTGTCCCTGTCATTTGTTCGGGGATCATGACGTACGCGCCACAC
CTGTCTTTGTTTCTTTATTACTCTATAGTACTTTCTTCGTTCCTAAATATAAGACGTTGT
AGAGATTGCACTATAGACTACATATGGATGTATATAGNNATATTTTAAAATGTAGATTCA
CTCATTTTGTTCCGTATGTAGTCTATAGTGAAATTTCTACAAGGTCTTATATTTAGAAAC
GGAGGGAGTATATCATATCAAAAGAGTATATATTATGTTATTAAAAACGATCAATGACGA
CTCTTGGCCTGGTATATCATCATCTAAGTTGGACAGTTGATAATTGGACGAGATATCAGA
ATCAGGCGACGCGGCAGCAAGTTTTCGGATTTTAAAAGGGAGTTATTATAGCTTGTAAGC
TACAAGCTGTAAAATGCCTGCCTGTAACGATCGGCTAAGGCCGCGATCAAGCACCGAAAC
TGACCGTGCAGATGCATGAAAGGGTTTCTTACCAACTATATATTCTCTTTGTCACTGAAA
AAGGTTTTTGATGACCACCGAATTTATGTAGGTAGGATCACCGGTTACAAACTTGCAGCA
TACATTTCATTACAATATCAAATATAAAATCAGCTCTAGGTCTGCTAATTGGCGAGGAGT
AGCACTCCTTATCCCGGTTTTCTTTGTTAGCTAAGAGCATCTACAGTCGGACTAGGCAAA
TCCAGTCTACTATACGTCTACAGACGCGTCTGGACATGTCTGTGGACAGCATCTGGCGGT
TCCTCATATGTTACACCATACACCCACATACCTTAAATGGAACCTTTAAATCCATGCACG
TTGATCATCTGATACAAATTATTTGAATTCAACAGTTTCAATCAAAGCAAATTAAAACAA
ACTTCAACAAACCGGACATGCCAAAATAAAATCAATATCCGAGCGAGAAGGGATGCTTGT
CGGATCACAGGTCACACACTTTCATCAATGTGTCCTGCTCGTCCAGCTTGTCCAGCTCCG
CCTGCATGCGGGTTGCATCATCCGCCTGCATCCTGGTCGCGTGCTCCGCTGTCGCAGCCG
CCCTCGCCGCATCCCGCGCCCTACAACCGTTGATCTCCTTCTTCTTCTTTGTAAGCCACT
TCTTCGCATTCATATCCAAGTGGGTTTCATCCGCCAACATGGTCTTGCATCCTTCACGTC
CCGTCCGAATTGCAACCTCTCCTTCTCGAGCTCAATCCCCCCAAATGTCTTGGCCTTCTC
AGTTCCTATTTAATCGCCGACTCTTGCTTCTCCAACTGGATCTTCTCCCTGTCAATTTCA
AGCCCCATCTCCGCCCTCGACCGGTCCCACTCCATCCTCCCTTTTTGCGCATCCAACATG
AGCATGTACCTCTCATTTTTCTTGTTCTCCCTTGTCGAAAAAATGCCCGTCCATGTGGAC
CACAGTTTTGTAGCTGCGGCATCACGGGAGATCCTTGCCTTCTCTCACTTGTTTCCCATG
ATTTGCCGGTTATCCTTTGGCACGGTAGCTTTTTCCATTGGTGACGACAACGTCATTGTC
CTCATCGTCCAACCCAATGGATTGATGGGAGCTTGATCCGTCATTCCGCTTCATGTCGGC
CTTGAGATCGGCCACAACTTGTTGCCACTTTAGCTTGATATTCAATAAGAGCCAACAATG
GCTAAAAGATAATGGCTTCTTCTTCACCTCGTGATACAAAGTGGCTGCCACCGCCATCTA
GCATACAACATATGTATGAGAAAAAGAATGAAAACACATAAACATATTGAAATAACAATA
ATATGAGGCAATTGAGCTTACATGAGTTGCCACTCCCATCCCACTTTGAGGCCGTCTGGT
GTTGGAAATATGCCCTAG