Contig Data
morexGenes
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Map Locations of contig_1563096 (3695 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1563096

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12353 3 1260 bp MLOC_12353.3 Available Available LOC_Os03g53970.1, FRAME:+2, EVALUE:1e-90, 13103.m05911 protein expressed protein





CDS Structure of MLOC_12353






Contig Sequence (3695 bp)

>contig_1563096 3695 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCACCCACACACGCCGTTTTTAGCGCCGACCGATCCCTCACGCGGCGC
TATTTCGGGCCACCGGGGGGTCGAATGGCTAGAGATGCTCTTAGAAATGGTATTGTTCCA
AACGATGGTGTCTCTTTTTAGGGTCCATCTTGTCTAGCTATATTACCTTAGAGAACACTT
ACATCAATGGCATCTTCCTTGTTGTTCCAAAGGTGAGTGCCCAAACAATGTTTATTAGAG
CTTATAAATATCACTCACCCTTTTTTTTGGAATCTGTCATGAACGATGTAAGTGTTTTGT
GTTAATCAATAAATTAAACCATGATCACATTCCTTCAAACAGAGACATACTTCCTCCGTT
TCATAATGTAAGACGTTTTTCAACACTAGCGTAGTGTCAAAAAACGTCTTACATTATGAG
ACGGAGGGAGTAGTTATCATGTGTTGCTTTTTTCCATCTAAGCCCATTTGCCCCCTTTTA
TATTTCAGGTGAAAACTTCTTTCAAACATGAGTCCAATAATATAATTTTGCGACATATAA
GTTATATTTTTGTTAGTCAAATCTGTGGAGAATACTTGTAAATCCAAACAGAGGAAACAG
TCGTAGAAGTATGTCTGTACTGTACTCTCTGAACATTGTAAAAAAAACATCCTGGTCACA
ATTCAGAAATCACGAGCAAAACGTCACGGCTAAATCTCTCCCAGGAAAAAACATATCAAA
CCATCAGAGTTCATACATCTAGCAGGCATCAACCATCAAGAACCAAAGCACAGCCAAGAT
CACAACCACACGCACGCACAACATAGCACTAGCACCGTTATTACACAACAACTCTGACCC
CCGAGCTCACTCACGGTCTAAAACAGGTTCTGGTAGACCTTGTCTTGGACGGTCCGATGC
ACTCGCCGCTTGCTGCTCCCGGTGCCCGAGATGGGCTTGTGGTGGTTGTCGGAGCTCTTC
GACATCGGCCTGAGGCGTGAGCTGGAGAGGTGGGGGTCTGGCCTCCCCTTGATGCGGTGA
GAGCTCAAGGATTCCTCGTACTCCTGGAAAAGTTCAGGGGCGAGATGAAGGGAATGCTTT
TGGCTGCTTGAGGGTAGAATAAGGGGCAAAAATGGATGGAAACTGTGCTGGCAACAGTGG
TGATACCTCGGATCTGCTCTTGGAGAAAGGGGTTAAGCAGGGGTTGAGATCCTTGACGAA
CATTTCGTCGGGGCTACCGTAGTTTGGTGGCGTCTCTGCTTCGCCGATGCTGCACTCCTG
CGATCGATGACAGCACATAGGAAGAACAGAAACGATCAGTCATTCAAGTCACACAGATAG
GTGAACATCAGTCATGCATTGTAGGATTCATTTGTGCTGGAGGTATTTTTATGCTCTTGT
TGCAACAGATAGTTTGCAAACAGCGAGAATGATAAAGCTCTTGAAAAGAGTTGGGATTTG
GAGTCTGAAACAGACTAAACAAATTAACCATGAAACATAAGGTAAGGGATTGTCCTTGCA
AAATTGACGGTGAAAGAAGTGCTTTCCAATATCACTTGCAAAAAATAAAGAGTATGAACT
GACTATGAGATAAATCTAACAACTTAACATCAAAACAAGGTGAGAAGAACTGGAAGTTGT
TAACAATGTGGTGTGCCCATATTTAAAAAGAAAGCAGGCCAAAACATGAGACAGTAGACT
AAAGTTGGGTTACTCCTGCTGTATCTGAATTGAGGTGTGAGGTGTACGTTTGATTAAGCC
ATCAAAGTCCATGAGAATATTGATAATAACGGGCGTTCCTCGAAAAAAGAGGACATAAGA
AACACACATACCAAAACGTTCTAGAAGCACAATCCAAATAATTAAAAGCATGATTCCAAA
AAAAGAGAAGCATTTGCAGCCCCATAAAAAGATAAATTCTCCATTTGTATAGCTTAATGG
CTGTTAAACATTTGTTAGGCCCGTTTAACAGTAATAAATATATTAATGACAGCCCAATGC
AAATGTCATTTATAGAGCTTAATGGCTGTTAAACATTTGCTAGGGCCATTTAACAGTAAT
AAATACTACCTCCGTCACGGTTTAGAAGGCACGGTTAAGTTTGCGTGCATTTCCACAACA
CACAAGGTTTAAGGCGCATTGCATTTACTCCTAGCAGCTTATTAGTACTCTGTTGTACTA
CTTCTATATGCATNNNNNNNNTGAATGCTATTTTTTAACTCATTTTACATCCAATCAATA
ACCACCTAGGTCTTAGAGAATTTTCATGCATGCCTTCTAAACCGTGACGGAGGGAGTATG
TATTCCCCTCTATCAATTGTAACCTGGTAGTATGGTACAGTGTGTTAGTATGAATCTTTT
ATGAAAGCATAATTCGTTCAAATCTGCTCCTTCCACTATTTCCATGGACAATTTGCATAG
CAAAGAAAGATTGACCTGGATTTTCCTATGCGCTCTTTCTCATGTATAAATATGTATACT
TCTCTCTGTTTCTTATAAATAGCACGACTAGTAAAATCTTGTAGAAGACCGGCTGCCAGT
GGCCAGTGGGGTGACCGTTTGTTAACCCGTTGCAGTTATTAAAACATCAAATTCTGGCAT
TGGCATGCTTGGCCTCAGGGTTAGTACTATTTTTTAACCATTGCCCATGGATTACCAGGT
TCCAAAAGAAATTTGTGTTGCAAACGTGGTCAGACAAGTCTGAATTCAAGAAAAGTACTA
AAAACAATTCACAGAGTAATATGCACACCATCTAATAGTGAGAAATAAAACTGTTGAGGC
CGAGAAGAGACACATTCAATCTCTTTACAGAAGAATGGTGGAGTAAACGATCATACCAGA
GAGAAGGCAGTCTCCTCGTTAAGCACGGGCGTGCTTGGGGAGGAGCAATATTCATCATCA
AAACATGATCTTGAGGTGTTCTTCTCGGCCTTTACCTGAAACAATAGCAATCGAACATGA
GACTGGTACCGAAAGATAGGAATGCATCAGAAATCGTAAGAACTTGCCTGGGCGAGCTCC
TCGGCAAGGCATTGGATCTGCCCGGTGAGAGTTGAGATCTCATCCCGGACGTGGCGGTCC
GGCTCCGTGTCCGGGAACAGGACGGCGTCCTTGAGCGTGCTGATCTCCTCCCGCTGGCGC
AGGCACAGGTCCTTGAGCCGCTCTACCTACTCACCATCACCACGATTACTCCATCAGGAA
TCGATAACACAGGAGGAGAGAAGGATACGCATTCAGTATTCACGAGCGTAGCAGCGGCGC
ACCTCTTTGTCCTTCTGCTGGAGCTGGAGGCGGAGAGCGGCGATCTCGTCCTCCTGCTCC
TTGCTCTGCGACAGGAGCTCCCGCTCGCTGCGCAGCACCATGGCGAGCGTCCGCGTGTTG
GCGTTGCCGCTGTTCTTGACCTCCGTCAGGGCCTTCCTCTTGGTCTCCGACGGCGCCTTC
TGGAACAGCTTCCGCGACAGCCCCGGCAGCTTGGCCCCGCTGCCGTTCTTCGCGGGGGCG
GCGGCGGCGGCGGGAGGGACGGGGAGGAGGTTCTTGGCGCTGGGCTTCTTCTCCATGGAG
ATGAGCCTCCGGAGGACAGAGCCCAGGTTGCCGTGCGGCTGCGGCGCCTGGCAGCGCAGA
TCGCCGCGGCCGGATCTGACCGCGACCAGCGCCCGGCCCCCGTGCTGCCCCGGCGTCCCT
GACGCGGCCGCGGCGCGGCGCGGGGGCGGGGGGGG