Contig Data
morexGenes
Links



Map Locations of contig_1563020 (3342 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1563020

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12309 4 1048 bp MLOC_12309.1 Available Available LOC_Os08g43470.1, FRAME:-3, EVALUE:6e-123, 13108.m04710 protein ER lumen protein retaining receptor, putative, expressed





CDS Structure of MLOC_12309






Contig Sequence (3342 bp)

>contig_1563020 3342 assembly3_WGSMorex_rbca.fasta
TCCAACGACTATTGTTGCTCAATCCACGATCCAGGAGGTGGTGGATGTTTTTAATTAATC
CACCGACGGACGCGTAGGGTCGCCCAAAAAATATTTAGAAACGAAGGAAGTATATTTTTG
CAAACATGAATCCATGCCTCCCACATGACGTTGACGGTTTCAGTTGCCGCTTCTCATTTC
TGAATATGGATCCACGGGCCCACATGTAACCCGATGCTGCATGCAATCGGTCCTTTCCTG
TCTGAAACCGGAAACTTGGCAGTAACCAACTTTCCTGACAGAGACCAAACGGCCACGGTC
ACCATCTATCGGCTTGGCTGGCTACCGTTCTCTCTTGTTCTCGGTTCTTAAATCCAGCAT
GGACAGGGCATTCCTGTCCCGGCAAACATGGCAAACTGCCGCATGGTTTTGGCACCGGTC
AGATTTCTCGGAAGCAGGGCCCAGCGCCACCGTCTTCCAGCCCCCTAGACCGAGGATTTC
GCTTGCACACGGAGCCGGTGTGAGACGCGGGCAACAAGGCGTGGTGCAACGGCCCCCGCA
TCATTTCACCAGGCTATAATACTTACTACTAGTGGTATATGGTCTTCTTCCTCTGATGCT
TCAGAGAGTTCATATCATAATTTCCACAGGTTGCAAGAGACGAGGGCGCTGCCATCACGT
GATAACCACCATCACCCGCCCTCGTCCGTTAAAAAAAAAAAACATCGGCTTCGCAATTTT
TTTTCTTTCTCTAAAATGGAGGCGCCAAACAAACATACCGGAAGCTAAAGTTAACTCTCA
AGTCAGGTCATCATACATACGCTGCTGTTGTTACCAGTCACACACACACACACACCGACA
AACCTATGTCTGCTGCTGCGATTTTCTCACTAATAATGACACTTGTAAGCTGTAACTGAA
AATATCTGGTTCAAGACGGCTCCGGCCTCAGGCAGATGCCTGACGGGTGAACCAACGAGA
CGTTTCTCCCGCTGCAGATCCTCCTCCTACACCACCCCGGAGGGTAGCCGTAGCACCAGC
TGCCCGCCGACGAGGCTGCACCGCCACAAACGCCCAGCATATCAGGTAACGATGTTCGGG
GTCAGGTTATAACATCTATGAGGTCCATGGGGGGTTTGTTTACCTCTTCACATAGTAGTA
GCAGAAATCTGCGAGGATGAAGGTCTGCACGATTTCTGATAGGAGAACCATGGATGGCCA
CAACCCGTAGCCCAGCGCAGTCAACAGACGCCCACGAGTGTCCAAAACCTACGCAATTCA
CACAAGCGTCAATGGGTTTTTTGCTTTCAAAAAAACATACAAATCACACTTCCTGCAAGG
TAAACAAGAATGACAGAAGAGGTCCACTGAATAACACATCAGCACTCATCACATACTGAG
GAAACTAACACATAATCACTTATCACAGACAACGGTGTAAGATAGAGCTGACAGCAACAA
TAATGAACACAGAATGCCGCAATACAAATCACACTTGTATGTATAAAACAGGCTCAGGGA
TTTTTTTTTCCAGAAGACAAACCTGGAGAACCCAGTGGGCGCAGCTAAGAAACCTCGCAA
CCCCCAGCGCAAATACATAGTGAGCTGTGAACGGTTCCACAATCTGCACAAGATGGTTGG
TCAGCAAACTTCACCTCAAGTAAGGAATTGCCTGCTACCATATTACCTTGGTATTTTGCA
TCAAACGCAGTTGTGGAAGCACTGAGACAGCTTCCAGGTAAACACAGAACGCCCAGCTAA
ACCGGTTTGCGATGTTGTGAGATGTTGAAGGATGAACAAGTATCGCCAACACAGCACAAG
GTATCACCTTCAAATAACGTAGAAAAAAAGGGAAAAAAAATTAAGTCCGCATGTATTATG
AGTTAAGATGAAATTTTTTGCAACTGAATAAGCAAAACAATCTGGTAGTTCATTGTAAGT
TTCAACGCTTTAAGTTAGTGATACATGGCTTTCCTAACACTTATACTACCCCATTAACCA
ATAAGATTTTAATGCCTTTAGGCTGGTCATAGTGGGCATAACTTAGCTAGTAACATAACG
CACCACAAGACAAGTTTGCTTATGTGGCAAGTAGTTAATGAGCAGAGGTGTTTGTGGTAA
CATAACGTGTTACTGTAACATAACGCACACCAAGGCAAAATGAGTCTACATCTAAATAAA
TGAAGGCTTGCATGACACCACACATATTACTACCCACTATGAAGGTAGTAACATAGACTA
GTAACATGTTACTAGTCTAAGTTACTTCCCACTTGACCAGCCTTACAAGGCTTTGACATT
TTACCACCACAAGTCATCCAGGGTGAGAGCCCATTAATTATCTCAAAGCAATTGACCAGA
AGATATGCACATAGATTGGGTACGAAGATTATCACACTACATTACAGATGAAGGTGCCAA
CATAGCACTATGATTTTCTCAACTGAGCGAAAAGCTTACAGATAAGGAAGGCAGTAAACA
CAACAAAGAGTCATACCAATACCTAGTATAAAACAAAAAAAGAAAGAGTGGTGTAGAGCA
CAAGTTGGTATAGTTCTATCTTTCATGCAAGGAAGCCACAGAAAGAATAGAAATAGCAAT
TCGCATATGCAGAGAAGTAAGCAACTAATTAGCTGAGCATTGGTAAGTCCATTTTTAGCT
TATTGATCAAACTGCAACAAAAGTGTGAACATCGCAGCCCCAGCTTATGCAAACCTAAAT
TCACAAAATTAGGTATAGGAGTTTGTGTATTCTTACCACATAGTACAATGCAAAGTTGTC
CTTGTCCACCATATAAGTTGACCTAAGTTTGAACCGAATCATGTAAATAACAAAAAGAGT
AGCCACTAGTGTAGCAGTATCCAACACGGTATGGATGTCATATTCCATGACAAAGCTGCA
GTATAGTCTAACAGCTAGAAACAATGCAGTCAAATCCTGAGTCTTAAGGGATAGTCCTGC
AAGATTTAAGAAAGAAGTCATCAGATACTTACTAAAACAGAGAGCACTAGTAAGGCCACA
AAGACACATAAATCATAAGAGTGATTATAAATGTTAGCAGGTTTATACTTTATACTAGTA
CCTATCTCACGTGAACATGTTAGAAAAGAGAAGCTTTTCCGAGTAAAGCAAATACCGCAC
TCACGAACATGTAATTTATGGCCACAAACCATGTACTCCCTCCGTCACGGTTTANNNNNN
NNNNNNNNNNTTGCGTGCGTTTCCAAAATAGACAAGGTTTAAGGCGCGAAAGCAATTACT
CTTATTAATTACTCACTAGTACTAGTCATGCATGTGCCCTCCCAATTTGCTGCTCATGCA
TTAGTACTAGTATTTTCTCATTTGATTAGGCGTATTAGCATC