Contig Data
morexGenes
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Map Locations of contig_1562929 (1990 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1562929

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12277 1 351 bp MLOC_12277.1 Available Available None
MLOC_12278 1 822 bp MLOC_12278.1 Available Available LOC_Os03g08050.1, FRAME:-1, EVALUE:2e-20, 13103.m30164 protein elongation factor Tu, putative, expressed





CDS Structure of MLOC_12277






CDS Structure of MLOC_12278






Contig Sequence (1990 bp)

>contig_1562929 1990 assembly3_WGSMorex_rbca.fasta
GGCGGGCGGCGGTGTGTGCGGGCGGGCGGGCGGCGCTGCGTGGGGGAGGCGCTCCGTGCG
GGCGTGCGAGATGCAGGGCGAGATTTTTGCACGTCCTAATTTCCACGTCGTGTATACACG
TTTCACTGAAAAATTGAAAGGTGTAAAATTTAACAAGGTGTATATGGACGTGTATATGAA
GATATACACGTTCAAATTTACACGTTCCACTAGAGATGCTCTTAGAGCGTGTTCGGATCC
CCTCCACTCCTCTAATTCCTTGACTCTGCTCCACGTTCATGCTTTACTAGCTCTACACGC
TAAATCTTGATTTGACAGTACGTTCCGTAACTAGGTTCACTCGACTCCACTGATCCACTC
TATACACTCACAATGAGCCAGCTGGGAGATCGAACGCTGGGATGCATTCTCTGTTTGCTT
TCAGTATATCTGCATCTGAGCAAACATCTGAGCGCAAGGAAAATTATCAATTCTTCGCTG
CCCCAAATACGAGTTCAAACATCTGAGCGCAAGGAAAATTATCAATTCTATATCTTTCAG
CCTTCAATGCAATGCACGTACATACTTCTCATACGATTTCCCGCGTAACCAATCTTGGGA
GAAAGTAAAAAATCACATAATCAAATTTGTCACGAGTTCAAACATCTGAGCGCAAGGAAA
ATTATCAATTCTTCGCTGCCCCAAATGGCAAGCTATACACACATAAGCAACATTATCATA
GGTTCAAATTATCTCACGCGAGAAAAATGAACAGTTCCTCACAAAACCGCAAACTGAGAG
CGCACACAATCAAAGTTACAACGGTTTTACATATCTCACATAGATTATTATTTTCACAAT
TCTCACGGTTTGGCACTAAGTGGCAAGAACAAAAGAATGAGTTTGCGCCTGAGCATGGGA
ATCAGCCGAAAATATGGATGTTCAGTTGTGGTGTCATCCTAATCCACATAATCATCAACT
GACCCAAATCTGCTCGAGTCCCATCCTCAACAAGCTGGTCCTCAATCCTCAGGCTGAAGG
ATGGAGAAGGGGAAAAGTAGAAATTAGGAGGGTGACAAGAATCAGAAGAATCTGAGGTAA
ACAACCAGATCATCAAAGCAAATTGTGTCGTAACATTTTGCTAGTCACACAGACGAATAT
AAATGATAAACATGATTTGGTACCATAACAAAATACACACAGCCTATCAGAAGTTCTATT
AAGAGCTGAACTAGGCCAGGTTTGTTCAGAACAAAACAACAATTGCCCAAAACCCATTAA
GACTGCGAGAGGCCGAAAGTTGGTCTCTAGCCAGCCACCATCTCTAGAACAACAAGTCCG
TAGTGAAATATTTAGACACGGAGACACAAAGCATGCGAAATTGGCATTTTTTCCGTAAAA
TAACAGAGGCAGCTCGCTGTACAGGATTTAGGAAGAAACCCAATAATGGTTGAGATTCAA
ACGTGGTTACTCAGAAGCATTGCAGGCATGAATACAGATGTAGCCAGGTTCTGCAGACTA
CCAGCAATCTCAGCCGCCAGAACTCAGAAGATAACAAGACCATTCAGGCAATACCAACAA
ATGCAAACCAAACCTCTGTAAATAAAAAACAGATAGACAGAAACATGCAACCATTTGGCA
AAAGCAGCAGAAAAACAAGTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAG
GGCACAGGAGTTTAGCAGAAGCAGGAATAGAAATACAGTAATTAAACGACAGACAGATCA
TTGCTCGCCCGGGATAAGAGTCTGAAGCAACAAAAGCAATGACCGCGAACAAAATCCTTC
AGCTAGATAGCGCCTATTTCTTCTTGATGGCAGCCTTGGTAACCTTGGCACCGGTGGGGT
CCTTCTTCTCCACGCCCTTGATGACACCGACAGCAACCGTTTGTCTCATGTCACGCACGG
CAAAACGGCCAAGAGGAGGGTAGGTGGCAAAGGTCTCCACAACCATGGGCTTGGTGGGAA
TCATCTTCAC