Contig Data
morexGenes
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Map Locations of contig_1562895 (3173 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1562895

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12259 1 1093 bp MLOC_12259.1 Available Available LOC_Os01g33800.2, FRAME:-3, EVALUE:5e-37, 13101.m14941 protein heat shock protein DnaJ, putative, expressed
MLOC_12258 1 553 bp MLOC_12258.1 Available Available None
MLOC_12257 1 795 bp MLOC_12257.1 Available Available None





CDS Structure of MLOC_12259






CDS Structure of MLOC_12258






CDS Structure of MLOC_12257






Contig Sequence (3173 bp)

>contig_1562895 3173 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCGCGCGCGCGCGCCCATATATGTAGACTCTCACATGCTCTCTTCTGCTC
ATCCTTCTGCCTCTTGTAGGTTGTACCCCAGTTCCAAAGTCCTAACTAGTTTCGTGCACT
CAAACATATGTACGCATGTTTGGAATCCAATTACATATATGTGATGGTGAGAAAGCAAGC
TCTCTTGTTTGGGAATAGGAAGCATGAGGAACCTGCTAGGAACGAAACTAGGTGGATGCT
CTTTGATTGTGCCGCCTGATCCAGCAGCTGTGTCATCTACATCTAACATCTCCCTCGTCC
TTGTCATATTGTAGCGCCTACGAGTAGCCAGCAAGTTGTCCGCAATATCCGGGATCTACA
TCGAACGCATCCAACTCTGGGACATTATGAGCGAGTCACTTCACTTGGGCACTATCACCG
AAAGAAGTTTATGTAACTTCTTCAAATTTTAAACGAGGCGTCAATTAGAACAGAAATTAC
TTCCATGTTGTAACTAGCTAAAGTAGACTCCATCGTGATGGTCTATGCACTATGACTATG
AAGTGTATTCCCGACAGTAACTCGCGCGTGGCGGATGGATGCACGCATCGTGGTGTGCCA
TTTGACAAATTATTCTTCCTAATTGGAGCATTTCTTTGTGATGTTTTTTGTTGGCTAGTA
TGGTTGTTTTCCACCTGATGCCTGCAGGAACAAAGGGGAAATATGTTTACAAGACAAGGG
TAAGAGAAAGTCTCCATCACCTTGTCCTCTCATAGAGCGTGTGTTTCGCTCCATCTTTCT
TCTTTTCGCCCATGGTCCACAACTCGTCCTTATATACCTTTGTTAATTATGTTTAAATAT
TTGCAAGTTTATTACTACCTCCGTCTCATAATATAAGAACAATTTTAACACTACACTAGT
ACAAAAACGCTTTTATATTATGGGACGGGAGGAGTACTTTGGTGCAGAATGGACTTATGA
ATTAATTGATCTATCCATAAACACAAAAAGATGCGTTTAACATACAAGTAACCATAACAA
ATGAACTAAACAGCCAACTTGCAAGACACCTTTCACTTGCAAAAGCTCATTGTACTTGCA
ATAAGTATCGATAGGTTAGCATGATCAGCCAATGACTAGTAGCATAGCACGAGAGTATAC
ATCATTATTCCATCATTTCAAGTCTCAAAGCATAGGTCTTCGCGCTCAGTAAAAATGAGC
CATGAACGAAGACCTACCCAAAGTTGTGTTATACAGTATGAAACAACTCATAAGAAAAAC
CCTTTTTTACATGTCTCGATAACTTCAGCTCTCTTCGGAAAACAACATGCAAACTAGCTC
GTATAGCAACGTCACAAACCTCACATTCTCTATGGTTTATGTGCCCCTAGCAATTTCGAC
ATCCGATGGTACTGGCCGTCAATTTGGCCATGCTCTCCCTTGGCATGCCTCGAGCATAGT
GTGGCTCAAATTCCTCACAGGAAGTTCCTCTGCACAGCTCCACATGAGAAACGTGACGAC
AATCCTTGTGTTGTCTTCTCTGGATCTAAAGCCACATTTTTCCGTCCGGCCGTCAAGTCT
TGCTCACGGTCCCACGGCTTCCATGGGTGGTTCTCCTCCCATTCTTGCTTCCCTCGTTGT
TGCTTCTGCTTCTTTTTCTCCTTTTTGCTCTCTCGGTGCTTCTACACGAGAGATATTGAC
CGCTTGGAGGAGTTGTATTTATCCACGAGGGAAGCATATGAGCTTTTGCCCTTCTCTTCA
TGTCCATCTGTAATTGCCTTTGCTTTGTTGTAGGCTTCTAAGTAGCTGCAACAAACATCA
TTAACACTATCACCAGCAGTACATCATTATTTTTATGTATTAGCATGTCAAGTAATGAAA
AATAAAAATGTTGTCAAAAACTACTGGTTTTTTGTAACAAAGCCACTCTGCCGGTATTCT
TGTCATACTTGCTGGTATAGAACATATTGCTTGATAGTGTAACAAAGAGGAAAAACAACA
AAGGCAGAATCGTACTTTTGTTGTGCTTTCTGGACTCTATCAAGAGGACTATCTATCCAT
GCACTTGTGTCATCACATCCTTCTTTACGCAGGTTTAGTTTTTTTTGGTTTGGCACATGC
TTAATTGTGTGTGTGTGTCTTTCGAGTAGGCTTAAATAATTCTCGAACCATTGACGACGC
TACTGCTTAAAATCGGACTGCTTGACTGAAATGGCGTTTTTGGGAACTCAAGATAGCGCG
GTTGACACTGTGAATGCAAAAACTATGGGCAACACAACGTGGCCTGCTCTCCGGGGGCAT
GGCGGCCATTTTGCATGCAAAAACAACTTTCAATCACAATGGCCGCCAAGTCACACTTCA
TTCTACTAACATCACTTTATTTCCTCTCGTCTCTGATGGGTTTCTGACGGGCACCTACTC
TGTTTGCACAAGGGGTACCTGAACTCTCTGACGGAGGTGCTCCTCCATGTCCTAACTGAG
GAACCGCCCACCCACAACAACTCACCGCGGCAATGAAATGCAAAGAAAAAATCGATCGTC
TTTTGACACAAATCCTCATTAACTATCAGACGGAACAACACACAACATCTAGACCTGGGT
GTACAACAAACATTATTGCATCATTTCTAGCCAGATACAATAAAACATAGTCCTTTGCAC
TCGTAAATAATCAGCCACCTACGTGGAGTTGTCATACAGTCTGAAACAACTCACAAGCAA
AAAAACCTTTTTACATTCATAACTACAACCCTCTCCAGAAAACAACATGTGATCCTAGCT
AGCTCAAATAGCAAACGCATAAAAATATCTAAAGCAGTACACACATGTGCATATGTTGTC
CTAGATAGACGTGTTGCACTGGGAACTACACTGCTTTAGCTTTGTTCATTCATTAATTTC
CACAGCAACCTTTTGTTGTAGGGCTTTCACCTTCAGTATTCCCCACCCATATGTGTAGAC
TCTCCCATGCTATCTTGTGCTTATCCTTCTGCCTCTTGTAGGTTATAGACCACATTGGTC
GTCCCAATTAAATAGTACTCCCTTTGTCTTACTCCCTCCTTTTCGGTTTATAGGNNNNNN
NNNNNNNATCTCATCAACCAAGGTGAATTGTGAATGGATGACACTAGTTTTAATTAGCCA
ATGAAATATTTCTCACATATTCAATTTTCAAGGCAATAAATGTAGCATCCTCC