Contig Data
morexGenes
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Map Locations of contig_1562863 (3238 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1562863

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12234 1 1481 bp MLOC_12234.1 Available Available LOC_Os12g12470.1, FRAME:-3, EVALUE:0.0, 13112.m01318 protein NADP-dependent oxidoreductase, putative, expressed





CDS Structure of MLOC_12234






Contig Sequence (3238 bp)

>contig_1562863 3238 assembly3_WGSMorex_rbca.fasta
TAAAATCTACAATATAAACTGTCCTGTTTGAAAATACAACAGATTATAAAAACCAGATTA
TATAATCTAGGTCGGTCCAAACAGGGCCTAACCTCTTTTATAGTTCTTTTGTTTTTTATA
GCATAGAACACTCCCTACAAATTCCTGCAGTTTGCTAATCCTATAGAAATCAAGTGGGCA
TGTCTTGTTTAAAAAAAAAAGAAAAAGTGGGCAGGTCATTCCCAATTCTGTATTTTTCCT
GTTTTGCGTTTTAAAATTCCTTTGAATCAAAGAGGGCCTGAAGTCATGGTCATTGATTTC
TCTGTAAAGATTGGATGGTGCAGATGAAGCACTTGTGCTCTTTTTGTAATTCAAAATTTG
TGTGTTATAGTGCATCACCTAACTGGCCCTTTGCTGAGCTGCGGCCAGAGTGCACGATGA
GTACCATCAACTCCCCTTTTGTAATACTAGTAAACATTATTAGTTCATTCCAGCTTCCTG
GATCACCTAAGCAGGATTCAGTTTTCTCCAAGTTTCTCCAAACGCTGGCTCAAAGGATGC
TGCATCCAGCAAACCGGACTAAGTACGCCTCTATATATATCTGAATTCTGATCTCTGAAG
GCACATCAGCACTTCTCGATCCAGGAGGGCTCCTGGCATGCGACGTCACTCCCGTGCGAC
GGCCACCAGCTGCTTTCCGACGTTGCGCCCGTAGAAGAGCCCAATGAGGGCCGACGGGAA
GCTCTCGATCCCCTCGGCGACGTCCTCCACGTAAGTGATCTTCCCTTCCTTGAGGTAGCC
GGCCATCTCCTCTTCGAACTTTCTGTAGGTACCGTAGTGGTCCATCACGATGAACCCCTC
CATACGGATGCGCTTGGCGACGATGTGGAAGAGGTTGCGCACGCCATCGAGCTGCTCCAG
GTTGTACTGCGAGATCATCCCGCATACAGACACCCGCCCGTGCAGCCTCATGTTGAGAAG
CACCGCGTCCAGCATCGCGCCACCCACGTTCTCGAAGTAGATGTCGATGCCCTCCGGGAA
GCACCTGAAAGCAAGTATCATGGCACGGAGAACTCTTGATTAACTGGCCCTGTTCATATG
AAGTTGGAAGCACGCAAGAGTATGATAGGGAAGGGGCCTGCAATTAACCTCTTCAGTGTG
GCGTTCAGGTCTTGCTCCTTCTTGTAGTTGAAGGCATCGTCAAACCCAAACTTTGTTTTC
AGGAGGTTGACCTGAGGAGAAGGCAAATTTATCCCATCAAAATAGAAAGGTTTACCAACA
GTAGTGATAAAACTAGATCAGTATGAACAAGGGATGTTCCCAAATGAGCACGCACAAACC
TTCTCATCGGAACCGGCACTACCAACCACATAGCAGCCAGAGATCTTGGCAAGCTGCCCG
ACAAGCTGTCCGACGGCACCTGAGGCTGCGGACACAAAGACATAGTCGCCCTTCTTTGGC
TTGGCCACATCAAAAAATCCAACATAGGCAGTAAGGCCAGGCATGCCTGAATTATGAAGT
TTCCAGCAGTCAGAGAAAATACTAGACAGTATATCTGCCAAGGTTACATTTGGTAGATTC
TATAGCAGACTAAGGTCTACGAAGAAATTAAACCATAACTTTCCAGTTTCAGAAAAACAG
ATAAATTACTATAATGATAACCAGACCCGGTTAACCTGTGATGAATAAAAGTAAACTCAC
CCATAACTCCTGTGTAGTACGACAGCGGCAACTCGGGATGGTTGATCTTGAAATGTGTCT
GCAGGTTCGTGATCAAAGTGTACTCTTCACATCCTGTCATTCCCCACACCAGATCACCGG
CCTTGTAATCCTGATGCCCGGATTCTACCACCTTGCTTACGCCCAGAGTGGTTAACACCT
GGTGCCGGATCGATTCAAGGATCCGCAACAAAATTGTCAAGCTTTCTGGTGGGTGAAAAA
ATTCAGAGAAAAGAAAGGCTGAATCCATGTGCAGAACTGTCGATCGTGTTGCAGAGCTTT
AAAAAAAATCCCCTGTTCCGTGGAACAGAAAGGTATACTTTTTTTTAGGAAAAACAGAAA
GGTATACTGATAACAGAGTGATTATTTTAAGCTCTGCTCATGCGAACCACATGCTGCAGA
TCCAACAATCGAGCCATGCATGAATCATATAGTATGACTGTGTGAGCTGAAGAAACAGCC
GCCAGTAGACTGGAGTACAGTTATCTGGAAGAATTTCCCTGATATACTAACACTGAAATA
CTGAATCCGAGAACCAACTGTAGATCTGTACTGCCAAGGAGACTGAATTCCGATGCGGGG
CCAGGTCTGATGCTAGGTTAAAAGGAATTCGGTGGTACTTACCTCCCCCTGGACGAAGTC
CGGGACGTAGCTGGGCTCGTCGTGGCGGGACATCCGGCTGCGCATGTAGGGGTCGCAGGA
GAGGTAGAGGTTCTTGACCACCACGGCGGCCGACCCGGGGGGCACGGCCAGGCGCGCCGT
CGCGGGGACGACCTCCATGTCGTCCTCGGTGGGGAACCCCGTCACGTGGCGCTTCAGGAT
CACCCTCCTGTTGCCCACCTCCGCCGCCGCCGCCGCCATTGCTCCCTTCCTTCCTTCCTC
GGACGCGCCGACGAGTTGGCGATGTGTGGTGGTCTAGATACTGTGTGAGCCGCGCGTTCG
GTCGGGCACGGTTCGTGTGTGGCGGATGGAGCGGGTGCGTGGTGCGCTTAATATGCGTGG
GGCGGCCGGGAGGACGGGATGACCGCACCGGAGGAGATGCGTGCGTGTGCGGCTCGTGTG
AGCGGGCCGGACTTGTGAGTTGTGAGGCGTTGGACAACGCTACACTTGAGTGTGACGCGC
CGCTGTTCGTCTCTTCGTATTTTGTAGGCGGTCTACCGTGGCCGGCTCATGGTGCGTTCT
CATCTGGACCATCTGACTGAGCTTGCCGTGATGTCGTTAAACGTGACAGAACTGGTGTCC
GTCGATGGTGTTTCGGTGAGGCACATGGCAGCCACGTGTGTTAATGCTTTGGGGCGCGGA
GAAGGGACCAGAGTGTGACGCGCGTCTTGACGCCCCGTTCTTCATTAACTCTCTTTTTTT
CTACTAGCAAAAAGGACCCGTGCATTGCAACGGGAGAAAAACAATTATAATCTTTAATGA
TACTAATCATATTATGTCTCCAAAATTTTAGGACATTACCTGAAATGCATGAACATTTTT
TTCAATTGCATTCAAAAAATAACACAAACTTTTTTCAAAATCATGGACTTTTATTGTT