Contig Data
morexGenes
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Map Locations of contig_1562741 (3417 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1562741

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12179 3 1516 bp MLOC_12179.1 Available Available LOC_Os02g17920.1, FRAME:+1, EVALUE:0.0, 13102.m02004 protein glyoxalase family protein, putative, expressed





CDS Structure of MLOC_12179






Contig Sequence (3417 bp)

>contig_1562741 3417 assembly3_WGSMorex_rbca.fasta
TCCGTGGTTTTCTCCCGCAAGGGTTTCCACGTAAAAAGCCGTGTCTCTCGTGTCTCGTTG
ATCTCGTTAGAATAGTGCTATCACTATGCCATACTAGTGTTTAAAAAAAACAGTCAAATC
ATACATACATGTACCATTAATACCTACATTGACTCCTCAATGGTTGGTATTAAGAATCAC
ATAGGTGCCGTTTTAGGAGTTGCTATACACTCATGGGAGCGGGCATATCATTTATGATCT
TTGCTCATATTGTTTTTTATGGTCCGGTCGAACCACATTCTTCTGAGCTTACATTTCAAA
CTTGCTCAAATTTCCCATAAAAATTGAACTTCCTGATGGGAAATGACATCCATAAAATTG
GAGTTGGCTCTCATTGTCCTCTCCTCCATGTGTCGTTATTCAGAGATAAAAAATTCTCCC
AAAGCCTATGCGTTCATGTTTACAAAAATGGTAAAAAGGTAAAGCGTTGAGGTTGACGGT
TCTTTCACAAAGTCAAAGTTGTACATGGTTACTCCAGTTCTTTGGCAAAGTCAACGTTGT
CAACAAACACCTGCATGACAAAAAGAAACAATTGAGTCTCAAACCGGTGAGCAATCAACA
GTCAGAAGATCAACAAGATGGAGACAGGGTGATACCGATTTCCACCCATCAGGGTCTAGG
ATGGCTGTGATCTTGGTGCCGAGCCCGGGCAAGGGACCTGCCTCCCGCACCACTTTCCCT
CCGGACAGCTTCACCACCTCGGCGGTCTTGTAGACATCATCGGTGCCTATCGCGATCTGT
GAAAAAAAGCCATAGCGATAAAACAACAGTTGGCTGTTCAAATCATCTATGAACTGCAAA
TGCAATGGAGTATGTCTTTTTTTCTTTAATGGAGTACGTCCTTCCATACCTGAGCATAGG
CATTCCCTTTGTCATATTCAGTGACACCATAGTTGTAGGTCAACTCCAGAACGGCATTCT
GGTCTTCAGGTCCGTACCCCATCATCGCCACCGTATACTGCACAAGAGCTTGTCCAGTTT
AACACATGGCGCTTCACAAGAAATCAAATGATAGATTGAGCATAATGACCACCTTGTATT
CAGGGTTGTCTCGCTTCCGGAGCAGTTTCATACCACAAGCCTACAATTAGGCGACAATAA
TAAGTCACTGTGGTGATCACCGAGGTACAAGTAAGTACAACAAGCCACATAACTGTCATG
AACATCAAGTGGTTTTGAGCTGCCTACCTTCTCGTAGAAGCTTATGGCTCGGTCGAGATC
ACCGACGCGAAGCATCACTTGGCATAGTGGCTCTGGAGTCCCCGGCCTCTCTAGGATCTC
GAACTTGTAGCCGTCAGGGTCTTCGATGAACGCAATCACGGTCTTGCCACCCTTGACAGG
GCCAGGCTCCCTGGTCACCTTGCCTCCCTTGGCCCTTACGATTTCAACTGTTTTCGCCAC
CTGTCATGACCAACCGTCAAGATTCAAAGCATCTTGTTACGAATAATCGTAAATGGCTGA
TGAAATGGTGCGTTACATCATCGGTTGCGATGCCGAAATGACCGAACCCCGCTCCGATAT
CGTACGAGTCAACCCCGTAGTCTGCAGATGAATCGTGGATCACACATTAGCAATGCTGAA
AGATTACAGCGGGAATGCACTAATTCCGTGTGCCATGCATGTAAGAATTACTGTAGGTGA
GCTCGACGGCGAAGTTGGATTCCTCGGGGCCGTATCCGAGGAAGGCATTGGTGTACTTCT
CCTCGGGTATGTCGCGCTTCCTCAGCAGCTTCATGCCCAGGCACTCGGTGTAGAACCTGC
ATCCATTGGACCCGTCAGAATTCTCTGCTGAAGAACGACACCGGTGTTGCATTGCAAGGT
TACTGCGGCCGGCGGGCTGACTTGATGGTCCTGTCGATGTCGCCGACGCGGTAGACGACG
TGGAGGAGCCTCCTGTTGTCCTTCTTGGCCCAGGCGAAGGCCTCGTCGTTGCTGGAGAAG
GAGGTGGCGGCGGCCTGCGCGGCCCCGGCGGAGGCGCGGAGCTTGAGCTTGGGCGCGGTC
AGCCGGATGGGGTCGGACTGCAGCGCTATTCCGGGACGGGAAGCAAGAAACAGGTGAACG
GAATCAGCCAGATCCCAGATGCAATGCTCGTGTCCTCAGTTGGCGTGGTGGAAGGAAGGA
ACGTGAGCTTACCTGCGCCCGCGGCAGCCGTGGAGAGGAGCATGGATCTCCGGGGGACGG
CGCCGCCGGAGGCCGGGGTGGCGCAGGCGACGGCGGCGCGGCTGACGGCCATGGGGAGAG
CCCTCATCGTGGTCGCGAAGCTGGGCCGCCCGCTGTGCTTGGGTGTTTGGTGCCGCTTTC
TCGCGCTATCTATCCTCACTCACTTAATTTCATGGTCGAGAATGCCGGCTCCGCCCGCTA
CCAACCGTCGTCGCGGTACTATCCAATGAGAAGGCGCCACCTCCCCTCGGACGCAAGCGC
AGGCGCCCGTATACTCGTCCATTAGAACATCTACACATCGACTTAGTAAATACGACCCTT
AAGAGCAACTTAAATTGAGCGACTCAGCCGTTTGTTTGGGCAACGTGGATAAAAAGGATG
GTCCAACGCGGCGATTCATTGTCATAATGCATCCGTTTTCCGTCCGCGTCGATTCATTTC
CGGCACAAATATGAGACTGAAATGTGTCGGCGTGGACGCGAAGCGTTCACGCGCGTGCCC
TTTTGGGATCCGCCCCAACCATCCATGGTCAACATTATTAATGACGGCTCCTCTCCTCAC
GCTCACGCGTCAGCGGCCGTGATCGGCCTTTTTTAATCCGCCCGTGCGGTGGATTCTGCC
TCATCTGCTTCCAAAACTCACCCATCCCCATCTCGCCACCTCATCGACGACCAAACCCTG
ACACCATGGCCGGCACCTTCCAAAATAAGGGCAAGGCTCCGCTCTACCTCCGCGCCATCT
CCCTGCCGGTGTTTTCCAGCAGGGCTCGCCAGCGTCTGAACGTCCTAGTGCACCAAGCGC
GGTGGCGCTAGGAGCACCGCGTGCCGCTGCCTTACTCCGACGTCACCCTCTATCACCACT
GGCATCTAGATCCAGAGAGGATCCCGGTGTCGGTCGTGCCGCGGTCGATGCGGTTGCACG
CGGAGGAGGTGAGCCGTCGTCGACGTGTGTCGACGCCGGCGCAGCGGCAAAACCCTGCAT
ACGCGACCGACTCCCTCACTAGAAGGTCTGGTTCACGGTCGAGCACGAGGAGCAGTGCCG
GCGTGGCGTGCGCGACGTGCAACCAGGAGGCCTTCCGCTGCCCCCGCCTGTCGTCAGCGA
TGAGGACGAGCAGGCTCAGGCCGCCTACCTGACGGCGCTGGCAACTCTTCTCCGCGAGAG
CGAGGAGGAAGAGCGGCGCAAGGTCGACGAGGAGGCGGCGTACCAGCAGCAGCTTGC