Contig Data
morexGenes
Links



Map Locations of contig_1562721 (3436 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1562721

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12171 2 1421 bp AK249287.1 Available Available None





CDS Structure of MLOC_12171






Contig Sequence (3436 bp)

>contig_1562721 3436 assembly3_WGSMorex_rbca.fasta
TGTACCAGTACATCAACCACGTTTCTTAACGCTTCTCGCTTAGCGATTTACAAGGGTATG
TGGATCTAATCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTCGTGTGCGTAGGAA
AATTTGTATTTCCCATGCAACGTTCCCCAACACGTAGACCTAATAACTTATATACCCTGG
TCCTGGTAACTTTGGCGATAGAGGTGGGGGATTTGATGAAATATCTCCTCGGTAACTTTT
GTATGAATAGCATGGTAACTCATAATTCACAGATCTGATAACTTATGTATCCTGGTCTTG
GTAACTTTGACGACGGGGGTGGGGTTGTGAGTTGATGAAATATCCCCTCATTAACTTTTA
TGTGAATATCATGGTAACTCACACATTGTGACCTGATAACTTATGTACCCCGTTCCAGGT
AACATCGGCGAAGAGGGTGCGAGTGGGGAGTTGTTGAAATATATCATGTTAAACTCTATG
CAAATAACATGGTATTTTACATCTCGAAGACATGATAACTTATGTACACCCCATGGTAAC
TTTGACCCTGTTTGCGCTATAGAACATTTTGAAGTTTCGAAATAGGAAAGAATCTAAATA
GTGAGAATCTGCAACGACATCATCTTTTGTGTGCTCTAGCACATTTTCATGTGAAGAGAA
TGTTGAAGGAGCTATTTTTATGTCCTCGTAATTTGTATGTAAATAAGATGATAACTGGCA
TACGAGAGACGTGATAACTTATTTTGCCAAGGTCTGCTAATATTTGACCCTAAAAAAAAG
TCGTCGAGACATACTTATATGGGATCTAGTTTCGAAGATCAACAAATCTTTTATGTAAAC
ATGGTTTTTTAATCAGACAAACGGTTTAAGCTACAAAACGTTTTGACATTTTATTTTTAG
ATGAAATCTTTGTTGTCATAGCTTTCGTTTTTTCTGCATGCAGCTAATGCCCAAAGCGTG
CATGAAAATCCCTACATACGTGATTAATAAACGATTACAGAAGGTGTTCGGATCTATTGC
TTAACTTTCGAACAGTTCGGAAGTTAGCAAAGTTCATTACAAAATAGTTCGTTCGTTTAG
CCCATTTGCTTTAGCACCAACCAGTCACGTTCTCCTCAATAATTTACCAGAAGCAGAATC
CCCACATCTCTTGCCACGTACGTCTACATCCCCACAAAGTACACTATAAATACCCGTCCC
ATGGCCACTCCCTTCAACTCACCAAGCAACACTTGAGCTAAACCATATCCTCTCCCAAGC
TAGCTCGAAGAAGCAACTTCAGCAGCAGCAATGGCGAAATCTTTCACCTCACTAGCGCTA
CTTAGCGCACTGGTTATGCTCTCGCTTTTTGTGAGCCCCATTGCTTGCTCCCGCAAGCTC
CCCAAGCCTGCAATGAAGGTCCACAAGAACCACACCGCTGCTACCCCCTCGTCGTTTGCC
GCTTATGGCTCCGGCGGCTGGTCAGCCGGCGGCGCGACGTATTACGGCGCCCCCGACGGC
GACGGAAGCGACGGTTAGTGCTTGCATGCTTACTCCGCTAGGAGTAGAACGTACATTAAC
TGCACCGCACGGCGTCGGTCGATGGAGCCTAAAAATCATGAAAAATGTTACAGGTGGCGC
GTGTGGCTACCAGAGCGCTGTCGGGAACCGGCCCTTCTCGTCGATGATCGCCGCCGGGAA
CCCATCGCTCTACAGAGGGGGCAAGGGCTGCGGAGCTTGCTACGAGGTCAGGAACTCAGG
ATAACACAGGCACACGTTCACAGCTTGTGTGACCACTGCACTGCGTGCTGCCTTTCTGCA
GCTTCACTCCATTAATGGTGCAAAGTCGTACCGGCAGGTCCTAACTCCTAACTAAATGAA
TTCATGTGGCCCGCCTACGCATGCAGGTTAAATGCACCGGTAACCAGGCATGCTCCGGCC
AGCCGGCGACCGTCGTCATCACCGACGAGTGCCCCGGCGGGGCCGCCTGCCTCGGCGAGG
CCGCCCACTTCGACATGAGCGGCACCTCCATGGGCGCCATGGCGAAGCCTGGCATGGCCG
ACAAACTCCGGGCCAGCGGTATCGTCAAGATCCAGTACAAGAGGTACGTACATGCTTGAG
CCAAGAATTTTGCTCTCGCAACACAAATTAACGGAGACTGCATAATAACTAATCTAATCT
CTGTGTTTTCGTTAACCATAGGGTGCCATGCAAGTACCCTGGCATGAACATTGCCTTCAA
GGTGGACCAGGGCTCCAACCCCTTCTACCTGGAGGTGCTGATCGAGTTCGAGGACGACGA
CGGCGACCTCAACACCGTCGACCTCATGGAGGCCAACTGCGGCACCTGGACGCCCATGGT
GCAGAACTGGGGCGCGCTGTATCGCCTCAACTCCAACACCGGCAAGCCGCTGCGCGGGCC
CTTCTCGCTCCGGCTCACCTCCGACTCCGGCAGGAAGCTCGTCGTCAACAACGTCATCCC
CGTCAGCTGGAAGGCCGGAGCCACCTACCGCTCCTTGGTTAACTACCCCTAAGTTGGCTA
GTAACCAAGAAGTACAGAGTAATTTAGAACCGTGGGTTAATTTCTACTGCGGGGATTATA
AATATTTATACGTATATGCGTCCGGGAATGGCCGGAGGCTTGTGTCAGAAGAGGAAGAGT
AGGCCATGCTAATATCGTGCTAGCTCTTCCCTCAATGGCCTCTCGCGCTCCCCTGGTGAT
GCGTGTCGTCGATTTGTCTGTATTTTGTTTCTCTTCCTCTGTTTTGTTGTCGAGGAGAAA
AGCTTGTGGTGCAGTGCAACTAATGTTGCACGCCCATGTACCAAGTTGTGTGAGTGTGTG
TTTTTGCAGCGCAATCCTTGAAAGAAATGAACTTTTACATAATTTTTGTACTGAAATCTG
CAATGCCAAGCACTTTATTCAGTTTAATCACCAAGCATGTAGTCAGTCTCCTAACTCTCA
ATGTGTGTATTACTACTTGCAAGCTGCACCTGAGTCACTCCTCGCTGAGAATGCACTACA
TTTGCCGAACCTGCTCAAAATGTATGGAACTCTTCGAATCTGACATTCAAATGAGCATTG
ATGTTTTTCACACTCTCTCCTTTGTTCTTCATGGACCGTGTAAAGTACAACCTCCGTCCC
GTTTCAGGACACATTCATTATAAAAAAGTGTTTTAGGTCACTACTTTAATGATCTAAATG
CTTTTATAAAGAAGTAACAATTAATTCCGGACGGAGGTTATAGGAGCACCAATACTCCCA
TGGTAGCAGCTTTGGTATCAGTTTGGCTCCCCTTTTGTAGTCTAAGGCCTTCCGTAATGC
ATTGTCTCTTAGCGCGGTATCCTAGGTAGTATACGATCGTTAGATACAACCATCCTAATG
TATTGTATGTTAAGTGTCGTATCTTAGTAAGCATGTATTTAATGATTTTGGCCTCATACT
AATATGTGATTGGTCT