Map Locations of contig_1562674 (10512 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1562674

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12156 3 2769 bp MLOC_12156.1 Available Available LOC_Os01g49200.1, FRAME:+3, EVALUE:0.0, 13101.m05115 protein microtubule associated protein, putative, expressed





CDS Structure of MLOC_12156






Contig Sequence (10512 bp)

>contig_1562674 10512 assembly3_WGSMorex_rbca.fasta
AGGCATAAATTATGCCTCAACACCATGCAAGTCTTCAAGCAGTCCATATCCGAGGACGCG
GTTATTCAAACATATTGTTTACCCTGCAGGGGTATACTTCTTCACACACACACTCCTACC
CCTTATCGCCTTTTACACGTCATGTACTCGGCAACCTTCAAGCGGAAGCCCGGGGAGGGT
GTCAGCCACGGACGTTAACTTACAACGACTCACGTCCAAGGTAGTCACCTATCTGAGTTG
GAACCCATAATGGAAGTTCGGCCGAGGTTTCGAACATGTCCTCAAATGAAGTGAGGAGGG
CCACAAGCCGATCCCGAGTGGTCCGTTCGTCCACTTTGCAGGTCGTGCCACAACCTATAA
ACGTTTTGAACTACTACAACTCTTGGACTGAGAACATGGTAGGTTAATAGGCCAAGCGGG
CCAGGATCACTGAGTCCTCGGTGTGTGGTAGTAACTAGTCTTGGAATACAAACACAAGAT
CTCAAGTCCTAAGTGTGGCGCCAATGAGACAACCCATAATGTACTCCTACGCGGCCTCTC
ATTGCTATCTTTATCAAAACAGGCTCACACACTTAACTCTCATCAGTAGGACATGTTCAC
TCCAACTCATCACCCAGATGAACCAGACAAACTCAACTCTAAGCATAACAAGCATGACGT
GGATGAAAGGTCACAACATGGATCAAGCAACTCCTAATCATGCTAGGATCAAGGTTTAGC
TATTTGCTATGACAATGATAGGTCATGTGAAGGAATGGGTTCAACTAATGGAACACAAGT
AACAGCTGAGCCGTGTTGTCCTAATGCATTGAAATGAGAGCAAGAACGAGAGGGTGGGAT
TGTATCGAAATGTTCAAGGGGGGTTGCTTGCCTGAAAGATCAAAAGAACAAGGTTGTCCT
TCGATGTCCTCGATAACTACATCTCGCAAGTCTATCGACAAGGGCAACCAAGGAACAATT
TAAACTAGGTAAATGCTTCACAATGATGCATGATCATGACATGTTGACGTGGTGTTGAAT
TTACCTAATGCAACTCGTCACAAGTTAAATGGAGGTCATTTGATCAATATAGGTCAATTC
CAACTCCATTTATAAGCATTTAAATGCCTTTAATGAATTTTACCTAGATGGTGTGGATAA
GTTGCTCAAACATGCATGAAAATGATACAGATGGAAATATTGGATTTTTCTGATCATTTT
TCATACATAATTTATTTCAATCCGAGTTACACATTAATTTCTATGATTTTTCAAAGTTTA
AAGTATTTTATGGAATTTAATAAATCGTTTTCGGATTTATTTATAATCCAGAAACCTTTT
CTACGTCAGCAATACGCCAACATGACATCAGCTGGTCAACCAGGGTTGTTTCCGGTTAAA
CCTGACCATGAGACCCGTTTGTCATAGACATACTATCTCACCCGGTTTAGTTAAACTAAT
GTGGGATTTATTAGGGCGCGTGGGCCCATGTGTCATTGGCTCTTGCGGTGGTGTAATTAG
GCTAATCGAGCGCATGTCATCGCTGCTGGTGATTAGTCACGGTTGCTACGTAGGATGCGG
TGGCGATGCTCGTCCAACCGTTTCCGGTGAAGAATGAAGGCGCGTCTGGGTTCGTTCGAA
TGCCCATGGAGGGGCGCTTCCAATGGTGGTCGCGGGGGTGTCGGGGACGACGTGTAGTGG
CGATGGCGGTGAGCATATGCGGTGGCAGAGCTCGATGGTTTGCAGGCGCGACGCTCGGGA
CGCGAACGGGCCGACTGAGCAGCGCTGCCGAGTCAGGGGGCGCTCTGGAACGTGTCGGTT
GCATGAAGGCAACGGGCAGAGCATAGGGAGCACACGGCGTTGTGGCAATGGAGGAGCCGA
GCCTCGGCTCGTGCGGCCAGGGGAGCTAGAGGCACGGGAGAGCAGCGAGAACGGGGGGAA
ACGGGGTGGCTCATGTCGGGTCCGATGGCGTCATCGACGCTCCTCGACGGGGTCCCTCCT
CTCATCCGCCGCAATCTTCCTCCCCTCAGCTGCATTCCTTTCCTCTATTTCTTGTGAATT
GAGCATCTTCTTCTCTCCGGCATACTCCTTGCGTGCATTCACTATTGCTTCAAACCCATC
TTTGAGATCATTATCTCCTAGTTTTGAGCATTTCTCTTTTTTCCTTCCATCCGGCCTCTT
TGTCTTGGGTTTGGCAACATTGTCTTCACCACTTCCATCATTCTCATCATCTTCATCAAC
CGCCACTGCCTTTCTCTTGTTTGGAATCTCATACAAATCCCTATTGTTCAACTTCTCATT
TTCAAGATCACTCCAACAATGATGTAATGTAAATGGTTTCCCTTTCTTCTTCTTATCTCC
TTTCTTCCCTTTTCCTTGGAATAAACCTTGAGAAATGCTTACCTACATGAAGTATAAATC
AAATTGTGTTAGACATAAAATAGAAAGCAAGTGCAACACTTACATTAAATAGAAAGAAAG
CAAGGAAATTTCACCTTATCATCGTAGTTACAACCACTTGGATTCATTTTTTCCACATTT
GCCAAACAAGAAAACCACTTTTGACATTCACTATTAATAGTGTTCCATCGACGACGAAGG
AAAACAGACGATCGTACAACCCCGCTAGTGTTTCGCTCATAAAAAAATTCCTTCCTCCTC
AACCATTATGCGTTGGACGCTTGATCGGTTCCAACAACCGCATCAAGATAAACTCTCTTC
GATGCCGCGCAAATCAACACATCTTATTCATTGCTATAATTCCTACCTCTACCCTTCTGG
TTAACAAAACCCTCACCTTCTATGTGAGGATTATCTTCACCATCATGTGCTTCAAAATTT
TGACTAGGAAAATCTTGAGATGGAAACTCTTGATGGCCAACATTTGTTCATCATCAATGC
TACATTATAAACATGTTTTTTTAAAAGATGGACAACTAAATCATATAAACTACATGCTAA
TGAAAAACATGAAATTTTTTTTACCCTTCTCCACCAAAGAAGGGATCAATTGTCGACGAC
GTTGGCGTGGCTGTCACCTCCGACAACGTTGGAGTGGTTGCCACCTCCGATGGCGGTGGA
GTACTCTCCACGATCGAAGGAGGCTGACTAGCCGCCGTAGACGCCGCCGCTCCAGCAGCC
TCTACGATCGCCTACTTTGACCTAGATGGTAGTTTCTCGACGACGTATCCTCCTAGTCCA
TGACTGGCCATGGGTTTCTTCTTCGTTTCACTGACGGCGGCGACATGTCGGGGAGGAGCA
AAGTCGCTGCCTCTAGCACGACCGTCGGGGGGAATGGGGGCGGCAGAAAGTGGCGGAGCG
GCCGCGCCGACGAGAAGAATCAAACCGACGGTGGGCGCGACACCCGCGAGGAGATTGAAG
GCATCGACATCACGGCGGAGCACCGACGGCGCGACAGATCACAGAAGGTGAGGGGGCGGG
ATGAACCTTTCGAGCGGCGGTTGGAGTCGCGCGCACAACTTTCGCGTTTTATTCCACCGC
TCGTGGTGATGTATATATGGGTCACCGAAGTTATTTTTTACACCGTGTCCTAATTTTTTT
CCGCCAAATTTACATCACGGGCTGCTATTGGAGACCACTTTTTGGCCTGTGGTGATGCAA
AAAACTGTTATTTATTGATTTGCATGACCTATTGAAGATGCTCTTACGTGCCCCTCCCCC
ACCTCGCATGATTTGTCTAGTCGATTTGGCAGAGTGATGCCTCACATTGACAATGAAAAA
CACTCTAGAAGGGGTGGGAGCCATGCAACCTACTTGAGTTGCATCTTTTCCATAAACCCT
GGTTCCAACAGCCATGAGGTTTCAAAACGAAAGCGCTTTGACCTAGATAGTGAATCGTTC
CTTGACTATAGAAGCAGGGGTGAGTGATTGGGACCAATCCACGTAATGCCACTCCATTAC
AAACTCTTTTTGAATATATCAAATTTAAATAAGTTCAATTTAGAAAAAGCTAAAATTTCA
AACACTCTAATACTATGGGACGGTGGGAGTATTATTTCCACCAAATTTGACTCTTCATTT
CCCTCCAACTTTTTGGCTGTGTTTCACGTCTGTGCATCTTACCAAATCCTGTCTCGTCAT
TTTTGACAGCAAATGAAACAAGTCACTTGCTGATTTGATACGCTGCAACAAAGCATTAAC
TGTTCCTCCTAGCCAACTGCTGTCACGAACTCAAACTCCTGTCACAAAGAAGGGAAGCCA
ACCAGTCAGCTCCGCGGTCCACACGTGGCGACCCAGGAGTGGGCCCCGTCCGTCATCGCT
ACCGGGCGCACGTATCCAACCGGCAGCCGACCTGGCAAGGTCGTCCCCCAACGGGCCGGA
CGAGCTTCCCATCCGGACCGTCGAATTCAAAACGGAGGCCCCCGGATGCGGCCCCTCCGG
CGCCTGCGCAATAAAGATCCCCGCTAACGTCTCTCTGCGGCTGTCCCCTTCCTTTGATTC
CTTCCGATTTTTCCAATCCCCCTCCGCTCTTCTTGCCCCCCTCCCCCTCCCCTGTTTCAA
AACATTTCAAATCACTCTCCATCTCCTCCTCTCACCCCCCTCCTCCGCACTCTCTCGCTC
GCATCCCAGGACCCAGCCGCGCGACCACGACCCCTCCGGCGCTCCCACCGCCGCGTCTCG
CCGGCGAATCGCCGATACCGCGCAGAGAGGTAAGCCCCGACCCCCCCGCGGGCCGTTAGA
GCCCCGCCCGCGGTTTCCTCGGACCGGATCTGGCTGCTCGCCCGCTCGCTCCCCGTGAGT
GTGCGAGGCGAAAACCCTAGCTCCACCGGCGATTACGCCTCCCCGTTCCCTGCTTCGCGG
CCGGTTCCCTGCCACGGCGTCCGATTTGATCTTTGACCCACCTTGCAGATTGCCCATGGC
GATGGGTGGCGCGGTGAAAGACCAGCAGCAGCAGCTCCACCCGTGCGACTCGCTTCTCCT
CGAGCTCAACGTACGCCGCTGCTTCCCGATCCGCAGTGTTTGCTGCGCTGTTTCTGGTTG
TTCCCCCCGCGTCTGCCTCCAGGGACTGAGGGATTTTTTTTCCGGTTTCAGGTGATCTGG
GACGAGGTCGGCGAGCCCGACTCGGTGCGGGACAAGACGCTGCTGGAGCTAGAGCAGGAG
TGTCTCGACGTCTACAGGAGGAAGGTCGACCAGGCCAACCGCTGCAGGGCTCAGCTGCGG
CAATCCATCGCCGAGGCCGAGGCCGAGCTCGCCGGTATCTGTTCGGCCATAGGCGAGCCA
CCGGTTCACATCAGGCAGGTTTGTTCCTGGCTCCACTAGTGTAGCACGCTGCCATCTCGA
ATACTGCTAATTATTCCTTTGGAAAGAAAATAAAAGAAAAGAAGGGGAATAGTGGTAATT
ATGGATAGATGATGGAAGGAAAAATTTAGCAGCAATCTGGAAACTGCACTTTGTTTTGTA
TGCTCTAATAGCTAAGATGAAATAAATCAAATAGGACGACAGCTGGACTGGACTATGTAT
CCAACACTCCAGTTGGTAGAGGAACCAATAGACAGTAACAGGCCATCACTAACTAAACTC
ATTTTTTTACTAGTGTTAGTATACCAGGAAATATGTAAATACAACTTCATTTTCCACTTC
ACTTTGAGTTGAACCAATAAACATACAATTTCCTACGCTTAAACTATTCTACAGCCATTG
TAACTAGAATGCTACTGCTTGGGTTATGTGATCACCATTCACTGTATATGCATGACACTC
ATAATCTGTTGCATCGGAGACTTGACAAACTACTAGACCCTCCAATTCATATTAATATGG
ATCAAAGAGTACATGAATTCGGCTCAATTCGATGTATTTCGCCAAAAAAGTGTTCAATTT
GATGTACATACACCACGCTTGTAATCTGCTGTAACTGATTTGTTTTTGGTTCTGTTATTT
TGGCAGTCAAACCAGAATTTACATGGTTTAAGGGAGGAGTTGAATGCAATTATCCCATAT
TTGGAGGAGATGCGAACTAAAAAGGTTGAAAGATGGAACCAGTTCGTTCGTGTCCTTGAG
GAGATTAAGAAGATTTCATCCGAAATCAGGCCTGCAGACTTTGTGCCATTTAAAACTCCT
GTGGATCAGTCTGATTTGTCATTAAGAAAGTTTGAGGAGTTAACGAAGGAGCTAGAATCC
CTTCAGAAAGAGAAGGTCATCATCACTCCTGCCAATCGAATTCTTTCACCAGTCATACTC
TATCCATGCACAGCAGTGCTCTTTTTGTTCAGTGCTCCTTCGTATATATATCTCACTATG
TCTTTGTGTTTTTGACAGAGGGAAAGGTTACAGCAAGTGATGGATCATTTGAATACATTA
CATTCCATATGTGAGGTGCTTGGTATTGACTTTAAACAAACAGTGCATGAGGTGCACCCT
AGCCTGGACGAAGCTGAAGGGTCAAAGAACCTGAGCAACACTACAATCGAGAGACTAGCA
TCGGCTGTGAATAGACTGCGTGAAATCAAAATTCAGAGGATGCAAAAGGTCAGCATTTTC
TGTACCATTTTAAGCTTTGGAATATGCGTTGCATTTGCATACCTGAACTCAATCCTTAAC
TCTGATGACATATGAACCTCTCAGCTTCAAGATTTTGCTTCGACAATGCTAGAACTATGG
AATCTTATGGATACACCAATTGAAGAACAGCAGATGTTCCAGAATGTAACGTGCAATATT
GCTGCCTCGGAGCATGAAATAACGGAACCCAACACCCTGTCGATCGACTTCCTCAGCTAT
GTGAGTCACTATTGCTGTGGAGATTCCTCTCATGTTACAGTTGCTATTGCTATCTGTTCC
TACTGAGGCATGAATATTCATAGATTGTACTCATAATGTAGGTGGAAGCTGAGGTTTTAA
GACTTGAGCAACTGAAAGGAAGCAAAATGAAGGACCTTGTTTTGAAAAAGAAATCAGAAC
TGGAGGAGCACCGAAGACGCGCACATCTAATTGGCGAGGATGGATATTCAGATGAATTTA
ACATTGAGGCTATTGAGTCCGGTAAGATCATCTACCTCCCTCCTGATATCTTGTGTTTAG
TAAGGTGTGCTCAATGCCTGCAAATCATCTGGCAAACTACCTCATCCACCTTTGCACTTT
CCTCTACAGGAGCTATTGATCCTGCATTAGTTCTGGAACAACTTGAGGCTCACATTGCAA
CAGTGAAAGATGAAGCTTTCAGTCGGAAGGATATTCTTGAGAAGGTTGAAAGGTTTCTGA
ATGCATGTGAGGAGGAAGCCTGGCTGGAAGATTACAACAAAGTATGAATGCTGGCCAATT
TAATATTCAATTGTGCTTGACATGTTTGTTTTTTGGATAATTGTTGTTCCCATTTATTTG
CTACTAATGATTTTTCCTTTTACCTGGAATATTTAGGATGACAATCGTTACAATGCTGGG
AAGGGGGCACATCTGACGCTCAAGAGGGCCGAGAAAGCACGCATTTTGGTTAACAAGATT
CCGGGTATTCTTGCCAAATGAGATTTGATATAATTCCTTGTCCAGTTATATATTCAGAGG
ATGTACTCCTTATTTTCTGTTATCACTTCATCTGATTTACATTTTCTTCACCTTGCGCAG
GAATGGTAGATGTTTTGACCACAAAAATCATTGCTTGGGAGAATGAAAGAGGGAAAGAGT
TCACATATGATGGTGTACGTCCATTTACTGATACTTCATTTTTAAACGGTGTTTCGTCTT
TCCTTGTTCATTGAGGTTTTTTCATGAACTATTTTGCAGGTACGCCTTCTCTCAACGCTG
GACGAATACATGATAGTACGCCAGGAGAAAGAACAAGAGAAGAAGAGACAAAGGGTATTG
TGCAGTTGCATTACTATCTAAATTCCTTACGGCATCTGTTTTGCATTTTAGTCAATGGTG
TGAATAACTGCAGGATCAGAAGAAGCTCCACGATCAACTCAAAGCTGAGCAGGAAGCTCT
CTATGGTTCGAAACCAAGCCCATCCAAGCCTCAGAGTATAAAGAAGGCGCCTAGACACTC
GATGGGTGGTGTAAACCGCAGGGTGTCTATTGGTGGAGCCACGATGCAAGCACCGAAAAC
AGACATATTGCACTCCAAGAATGTTCGTGCTGCCAAGAGAACTGAAGACATTGCCCATTT
GTCCCCTGGTAAGCAAGCCCCTATCAGGTTTTATATACTGCAGGTCTTGATTTTTTCTCT
TCATAAACCTCTGATGCATGTGAACGATTTCAGCCAGTAGAGGCCTAGACATTGGCGATC
TTCCCATCAAGAAGCTATCTTTCAATGCCACTGCTCTACGTGAAACAGAGACACCTCGCA
AGCCTTTTGCCCAGATCATGCCGCCGGCAAGCAGTGTCCCCTCCACTCCTGCACGCTCCG
TGACCAATGACACGGAGGACGAAAACCGAACCCCCAACCCCAAGACATATGGAGCAGCAC
TGAATCTCAAGACGCCGACCGTGGCGGCTCCGATGCAGTTGGCGATGACGCCCACCGTGG
CTAACAAGGTCACAGCCGCCCCTGTTTCCCTTGTCTACGAGAAACCGGAGCCAGCATTGC
CGGAGGCGGTCGAGTATTCCTTCGAAGAAAAGCGGCTGGCCGTCTATTTGTCCAGAGAAG
TTGTTTAGCTGTCAAGACATGTCAAGATCTCCACTCTGTGGGTAGGTGAAAGTTGAAAAC
CTGACTGCAGTTACTTGTGAGAGACTAGCTGTTTGCCTATGTTGGTCGACGACAGTCGCC
CAGCGCTGTTATGATTGTTTCTCTGCCATATTTGATTGTTTCCATACTCAGCAAAGGAAG
CTCGCACTTCAGCAGCTTCCGTTCAGTACTGCCATTTGGTTAGCTAATTAAGGTATGTAT
AGGTTTCTTTCTCGGCACTGGATCATCTTGAATCTGTTTGATTAAATACTAGATCAGCAC
TGTTTTTAATCCACATGATTATGGGTGAACCGTATCAAGGGTGAGAATCTTTGGAAGTTA
TGGGTAGTGGATTTGTGCGGGTTACGGCAGTGGATATGTGCTCTTATATGTCTTGGCCGA
GCGCAATAGTTGCGGCAATCAAGACGTGCTGGTGTCGTGTTTTCTATGGACCTTGTTGCA
TCCACGAAGAAGAGATTTCCCACCACAAGTAGAACATTGACAGATGGCTGCATGGAAACT
GCTGCACAAGTCTGGTGCTAGCGCAGTTAACAGCCACAGCTTTGTTTCGACAGCACTTGA
AACTGGGTGCGCAGGCTTGCGGCGGCACCGAGGCCAACCATTTCCACTCCCCATTTGACC
GAACATTCTCCACACCCAAAACCCTCTGACCAACCATCGCATAGCACGGTAGCTACGCGA
TGGCGATGGCGATACCACCCATTGACAGCGGTCCTCCAACTCAAGGCTGCTACGTAGCAA
CAGCAGCGCAGCGCCGGCGGATGGCGAGTACAACAGAGACTCCGAGTACGGAGGGGCTAG
CGTCGCTTGACGCGGACACGCCTCTTGCCCATAATTAGCCCCGGCAAGCAACCAGTGGAA
GCCAACGTCACGCGGGCTTGGCCATTCCTGACACGGGCCGGGCGGAGCCACACGTTCGGT
TAGAGCATAAAAAAACTGCCGGATTGCCTAATCGCCGGCGCTCCCGGACGCCCGACGCGT
TGGGTTCTATGTCGGAACTTCTGCCGACGAGTCTGGTCCAAGGTTGCGGAGCGGTAACGG
ACGTCGTAGACAATCACAGAAAATAGAAAACACAAGATGTAGGAAGGAATCAATTTTTAT
TAATGATCAACTCTATTACAATGATTGTCCCTCCTCTGCTCATATAGGGGTATGGGGTGA
AGGGATAAGTACCCATCTAACGTGAGTTTAGGAAACGAGAGGGGCTGGTGCGTAGCTCGC
ACGCTAGCCAGCCACGCCTCAGCTGCGCGAGGCCTTCTGGGCCGGCCCGGTTTCCCAACA
CCCCCCTTTGGGTAATTATCCGTATATCCATGTCTCAAAACTTCAAAAAAAACCGAGTGA
AAAAAATATGGAGAAAGAGCACATAGTATACATTGTTGTATTGCACGAATTGCCTCGTTA
AAAACCTTAGGTGAGTACAATCCACTCAACCACGTGGTTGAGTACTCAATCATCGGGATC
GAGATTTTAGCGACGAATTTGTGAAGTTTCTCCCCCTGAACCTTGCATCTCTTTAAGTCT
CATCATACCGATTCCACGCACACACCTTTCAAAGGATGATGTCGGTAACAAATTAGTGAA
CATGTCAGCAAGATTGTCACACGACTTAGTATGCAAGATTCTCGCCTCGTTCATGTGTTG
CAGTTCGTGTGCATAGAAGAACTTTGGACTAATATGTTTTGTGAGGTTACTCTTCACATA
ACCCATCTGAACTTGCGCAACACAAGCAACATTATCCTCATGGATAATGATAGGGGTTTG
TACGGTGTTCAGCCCACACGTCTGCTGAATGTGGCTGATCATCCGCCGAAGCGATACACA
TTCCTTTGACGCTTCGAATAGTGTCATTATTATTTTCGAGTGGTTCGTGGAGGTCGACAC
AAGCGTTTGCTT