Contig Data
morexGenes
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Map Locations of contig_1562488 (4269 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1562488

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12086 1 1619 bp MLOC_12086.1 Available Available LOC_Os10g37640.1, FRAME:-3, EVALUE:0.0, 13110.m03418 protein HIT zinc finger domain containing protein, expressed





CDS Structure of MLOC_12086






Contig Sequence (4269 bp)

>contig_1562488 4269 assembly3_WGSMorex_rbca.fasta
TTTATACTAAAGCTAGTATAAAGTTGAGANTAAAGCTAGTATAAAGTTGAGACACTTNTT
TTGGGACGGAGGGAGTAGCATATAGCATGTTGATATGAGCAATATTTTGCTCGGAAATGT
GATTAATCAGGTCGCCTTAATATCAGAACTTCAGAACTTCAGAAATGTAAACTGTCACAT
CTTCCAAAGATGACAATTTATACATTTAAGCCACTGCACTTGAAGGTGAAGAAAACAAGG
ATCAAATGATACAGCTGAGAGATACCACAAGGTGCCGAAACAACGAAGTGTGGTTATTCC
AGCAGTACTGCGTTGACAGGCTTACACCTCCTCAATAAGAACCTTGGACTGCGGGTTGTT
CTTTCTACCTGCCTTCCTCAGTCCGCTTCCACCGTCCAGCTCCTCAAGAGCTGCTTTCTG
CACCTCAACGATGCGAGCCAACGACGGCCACACCTCACTTGGCTGCTCATGAGCCCAGCA
TGTCATGAAGAACAGCTTCCTACCGGCGGCATGGAGCTTTTTGAAGCTCCGCGCCTTTTC
TGCCTCACCCATTTTGTCTTCCTTGAGGATGCTCTCGCCAGCTTGGATGAGCCTGTGGAA
GTCACACAATGCACAAACCACTGCATTGCCTCCTAGGGAGAGGATTCTGACGATATCATC
CACAAGTCCAATAGCAAACCTGAAACCTCCGGTGTGTCGGTAAACAGGAGAGCATGTCTC
CTCTATGCACGTCGTGAGCGCTTCAGATACTGCCTCAGGTTTAGCGCCGTCCCCCATGAC
TTTCGACATAGACAAGGCAACAGTTGAAGCACCCAAAAGATCAGACTGCCAATCACCATT
GTAGAGGCGAAGCGTGAAGCAGTAACTGTAGAGAATATCAACCAAGTGAACAGTGAGCAG
AGGAGATGGCTCAGCCCTGGTTAGCTGTTTGAGTGATGGGAGAGGAGATTCTGGCCCTTC
TGGTATTTCATTGATGAAAGACTCTGAGGCGGTCACTGGATCTGATAAAGTAGTATCGTC
TGTACTTATTTGTCTGATAAGCTGGCTCCCATCATGACTGAGAGAGATCGATTTAGCAGA
AGGATTTTTCCACCATGGAGTCCATGGTTCAATCATCTTGCTGAGTTCACCAGAGGCCAG
AGCTTGCCGAAATCGTTTGATTTCATCATCAGAGAGGTCCTCAAGCTTGATTTCATCACC
TATTTAGTAGAAATAACAAATAAGAACTCAACGCAGAACCTGACGGACAATGCGAAAATT
CGCTGGTTCAACAATATATCCAATGTAGAATGGCAAAGGCTTAATTAAATACAAATGTGC
AGGCAAAGAAAGGTGCTACAAAATGGTTGGCTGATGCTATTAACATCTAAGCTACACTTA
AACATCACATAACAAAACTCCAACATGAACAAGTTTGTTCAAAGAACCTATCGTAGTGTT
ACAAGATGCTACTGATTTATCACAATTATAAATATGAGCAGTAAATGTAGCATACCAGAG
ATGGCTTTCTGAATAAGCTCCTCTGACAACATTGACTCTGCAGGGTAAAAAATGTTTAGC
ATTGCGAAGGTCAAATCACTGATGGTATAAAAGAATACCCGATAAACTATTTACAAGATA
CTTCAGTGTCTCAATGATCACCAGAAGGACACATAAAATGAATTCACAAAAGGCAGGTCC
AACTAACTGTGTCAAACTAAATTGTAATCTATACATCAAAAGGAGTCCTGGACCAAGTTT
CGGTCATCTGAGAAGCTATTGCACAAATCCAGATGCCACCATGCATCACAAAATAAAGAA
GAGGGTCGTTTTTTCCAAGGGTAAGCATTAGTTCACTTTTTGCCCAATAACCTTAATTTC
AACCATTTTTGTGAAATTGCAGCCTGTAAGCAATATTTTCTACAATGGTAACTATTACAA
CTGATATAAGCACCAAGAAGAAATCATACCACATGTCAACTATCTATGTTAGTGTTTTTT
TTTAGGGGTTCTTGTTTGTTAGCTACCATCTAGTTCACTACTTGTGACACCTATAGAAGA
TCAGAGAATAAAAGGAGCTCAGCTGAGCATCTCAAAGCAATAAAACTGCAAGTTACAATT
CTAAATTCTTAACTGAAAACACAGGGATCCACTTTTATAGTACCTACTACAGTACAAGCC
TCCATGCCAATTACTAACAGTTTTGAGAGGAAATGGTATGCAAACAGAAATCATACTTTT
GCAGGACTGATAAACCAGAAGGTAATACCTAAAATAATACTTCAAGAAAGCTCAATATGA
CACGGGATAATCAGACGCATTGAAGCAATAGTTGATAGCTATGAAGGCCTCAATAAGAAT
GCATATACACATCTAAAGTGCAGAAGACGCAAACTGGAGCGCATGTGCGTAAACCAAGGG
ATACACTATGTTCTATGGTTCTTAAGCATAGGTGCATATAACAAAAAAAAATCTTGTTAA
ACCAACATACCATCTTCACCATCGGACTCCATTTCTTCTTCCAAGTGGAACCTTCTGAGT
ATATCAAGCATCTTCCTTTTTGATTCATCTTCAGGCTGAATCTGCTTAAGCTCCTCTGTA
ACATTCTCACGCATAAAAGACTCGGTGCATTGCACACTATGCCCCTATTAAACAAGAAGA
AAACGAAATATTACAAGAAATACCGAGCAATAAGACCCTTTGATGTAAAGCTAACTGCAA
ACACTGAAAATAGTCAAATACCAATCTTCCACAGTACCTACATGCATACAGAGGAAGACA
CACAATTCCACAGCGTATCAACGGAAAAATCACGGTAATGAAAATTACGGCATTCAGCAG
CGAGCACAACAATGCAGTATAACTCCACAGAACCAGCTTTCTTAAATTGACTGTATAACA
GCGCAGTCAAATACCAGTCTTGCACGGTATTTTCCTCAAACTAACTGGTGAGTACTTATA
TAGATCCATCCCTGTTCAGACTGGCAAGCAAATGTGAACTATGGTACCTAATTGCATGTG
ACCCAAATGCCAGCCTCCTCCAAATTTCTACACCTTACTGTCAGTGGCGGAGCCTGCTCA
TTTAAGGAGCCGGGGCAAGACATATGTGCAGTCAAAGTTGATAAGATTTTGCCCAAATTA
ACTCAACTGAACTTACTTTCTCTAATAGAGTATGAAGGAGATGCACCATGGGAGCCCAAG
CAGCGCCCAGGCTTGCCCAGGCTCTCCACAGCTTACCGTCAAAATGCTAACAGATCCGAA
CTATGTTTCCATGTATCTCAACTGGTTACTTCCGTCCTTTCAACTGGTTTGCTCCTCTAA
TCTTATATAAATGCACATTACTAAAATCCAGCATGCCACCATGTATTGTTGCTGTAGCAC
GACGCATTGCAACCTTTTTCATGAACTCGCGTCAGATTGCGCAAAGAGTCAATTCCTAGA
TAAACACCCAAAAGCTAACTGTGTCCCCCCATTTTCGTTTTAGCCTGCTCTGCAACAAAA
TAGCTACATGCAGTATGAAAAGCAACAAGGCAGTTGTCAGAAAAAATATATACTCTAAAT
ACCGTTTCAGCCAAAAGTTTACAGCTTCACTGCGGCAAATCGACGAACACCGCGTGGGCA
TAACCGAATGAGAGGGCGTAAAACTCCCAGCGCTGTGCCACAAACTTTCAGGCAGATGAT
GCGCACAGAGAGACAATGGAGAGGGAGGAGGACACACCTTGTAGCATGTAAGAGAGCAAT
AGCGGGAGTTGCAGCGTGGACAGGTGTACTGCGCGAACTGCTTCTGACATCTGTACAAAC
ACCAAACGCGCGAGCATCAACCATCAGGATTCTACGAGCCAGATGAGGGGAAAACGTAGG
GAGGGAGCGTGGGGCGGTGAGGACGCACACGCGGCAGATGACTCTGGTTTCCGCGAAGGA
GGAGGACGGGGCGGAGGAGACCGAGGCGGCGGCGTCCTCGGAGACCACCACGACCCTCTC
CATCGGCGGCGAGTGGTGGCTGCTCCCGCCCTTCTCGTGCGCTGATCCTCCGGTGTACGC
GGGCGCTTTGGGGGCGATTCCTTCCCGGCGGGGCGGCGTGCGGCGACGAGCTTTCTCGAA
GCTGAGACTGGAAGGCACGCCTCGAAGCTGGACGCCGAGTATGAGAAGAGAAAAGGTCCA
TATTGCCCCCGACTTGTTCAATTTAGGCCCTGATTGAAATCACCCTGATTATATAATCTA
GTTTTTATAATCTATTCTCTCTCCGTTCCTAAATATAAGTCTTTGTAGAGATTTCATTAG
TGGACTACA