Contig Data
morexGenes
Links



Map Locations of contig_1562472 (4424 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1562472

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_12069 1 598 bp AK252979.1 Available Available None





CDS Structure of MLOC_12069






Contig Sequence (4424 bp)

>contig_1562472 4424 assembly3_WGSMorex_rbca.fasta
TTGCTAGGGACCTTGTTTTGTCTATGCATCCACACAAGTATTGAGTTTTCAATCAATACA
CTTCTAGCATGGATAATAAACGATTATCACGAACTAAGAAATATAATAATAATTAATTTN
NNNNNNNCTCTAGGGCATATATCCAACACCTCCCCGTGGGTGCCGCGCCAATCACCGATT
CGTTTCCCATCATCGCCGCGGCCGCTCCATCACTTTTCGTCGCACCTGTTCCCCCTGCCG
ACCGTGGTAGAGGCGGCATATTTTCTCCTCCCTGACTTGATTTCGCCGTCGGTGAGACGA
AGAAGAAATCCATGACCGGTCATGGACATGGAGGAGCCATCGTCCAGAAACCACCATCTA
GGTCAAAGAAGGCGATCACAGCGGCTGGTGCAGCAGCGGCGTCTAAGACGGCTGTGGCCG
CGACACCATCCATCACGACTAGTCAGCGGATGAGAGGAGGGCCGCTGCCGAGGAGCACAA
GGTGGAGATGAAAGAGAGGAAGTTGGTGGCCGAGGAGCGCAAACTTGAGGAGAGAGAACA
AAAGTTTATGTTCTTGTATACAAGTGGTATGGATGCGAAGTAGAAGGCATATATTGATCT
TTTTCGTGATAAAATGTTGGCAAAGAAACAAATGAGCATGATGAACATGATGGGAGGAGC
CTATGGTGCACAAATGGGAGGGGGTATGAATGCCACTATGGGTGGATACATGAACATGAT
GGGAGGAGGTATGAATGTCGGGATGGGAGGATACGACTATGGTGGATATGTAGGTGGCAA
TGTGACTCCCAATGTTGCTACGACAATGGATGGTTCGGGGATTGTGCAAGAAGAGAAAGA
TAGAAATGGAGACAAGGAGAAGACCGACGAACAAGAAGATGATGTTTGAGTGCCATTTAT
TTATCTATTTTATCGTTTAAATACAGACTTTTCTTTGAAACACTTTCAGCTCTATGTTTA
TGTGAATTATTTTGGTGTGATACACTTTATTTGTGGTTGAAATATGTATTTTGTGTTCAA
TTATATATTTGTTTGATAAAGTTTAGTACAAAATGGGTGCGGCTTCCGCGCGGCTGCTCT
TTATTTTACATCACCTATTGGAAACATTGTGCCCTATTTTACATCACCTATTGAAGTTGG
ACACTTTCGATGCCCTAAAAACACGTTTTTGGTGATGTATATTTTACATCACCGTGTTTT
TGGCCTTCTATTTTATATCACCTATTGGAGATGTTCTAATACCTGTGCCACTCCACTTCC
ATTCTATATGCGCATTGTCCTTGTTACAAAAAGCCAGTCATGTTGACTTTGCGATAGTTC
TATGAATGTCCCACAAAGCCACATAGAGGAACACTACATTGACGATCTTGTCAGTGCAAT
GCCGATTTTCCTGGGATTCGAGGACATTAGGGGTTATCGTGCTTCAGTGGCGTTAGTACA
TCAGTGAAAGGGGAGAAGTTGAGTGGTTCAGGTGAGGGAGAGAGAGAAACGACACAACAA
TGCTAGTCAATGGATCGACTGGTACATGTACGAAACTAGAGAGGCGAAAGTAAGTAGGAA
ATAGGATTTGGAAAAGACTATTCATGCTATTGAGTGACTCTCCAAGGTTCTGGATGTAAA
ATGTTCCAGCTGCTTGTCGTGTGAACCATCTAGTGAGGGCCGGGCCGGCAAAATCCGAGG
CCCTAAACGAAACTAAAAAAATAGAGCCTATCTTACTTTAGAAAATGAACTACCTTGGCA
TGCTTAATCTGAGCTGCAGCAGGCGGGGCGCTATCGACATCCTTGGGCTTGAGCACCACA
GGCAAAGCGATCGGCTTTGGAGGCGGCTTGGCTGGTTCGGCAGCGGCACCACCGGCGTTG
CAGTTGCTGTTGGGCGGAGGCGGCTCTAGGACGTCCGGGAGGACTCCCGAGGAGTCGGAG
GAGCGGCGCCCCTCGTCGTTGTCGTAGTCGGTTGGTGGGGGCTGGACGATGATGGCCTCC
GCGGCGAGGACGACACTACAGGCGTGGACAGGCGGCGCAACTCCTATGGGCGCATCTGTG
ACTGCCGCTCAGGATCGATCTATTGCTGTAGCGATCTGATCAAGCAGTTTATTTTTCCGT
TTCCGATCGAGCGACTAGGCCCAGCTCTAGCGTCCAGCGGCCCATTGTGGCATAGCGTAG
GATTTTTTGCGGGTCCCTCAAAATTATGGGCCCGTCCTCTCATCAAGCGCACATAAACCA
CCACTAAATACAACACCGAGAAAATATAAAAGGTCTCCAAAAACAATGCCTCCAAGAAAA
AAACAGAGCACAACCGCCGTTGTTGCCCGATCCAAGATCTTAGGTTTTCACCCTCAAGAA
GTCCGAGCTCTCAAAACAATACCTTCACCAAAGCAATTGCGAGGCACAAACAATGAAGGC
TAGACCTTATATTTTCATCCTCGAAGTCCTCGCTTGGCACCCGAGGAGCACCATCAAAAA
TAAATTCCTCTAGTGTTGCCGCCCCCAGTTGACACTGCTGCTCGTGAGATCTTATGATCT
CAGCTACCATGATCTTCTCCATGGCTGCCTATATCATAGAAACCGAGAGGCCGACATGTC
CCATGGTGTTAACATACAACAGAGCTTCACGTCACACCTTTATGGAACCTCGTAGGCTGA
AATAGCGGTGCATGACCGAATTCTATCCGATCCAGATATATCTTGGGCAAGATCTCCGAT
GGCAGTTTGGAAACACATATATGTCGAGATCAAGGAGGGCCAATCATACATGATGTTCAG
GAGCTAGAGAACAAAAGACAGATCATCTTCGCCGAGGTGCGCTCATAGAGCCCAGCCACC
ACCAGATCATGATCGCACAAATGATGCAAGAGATAAGTCTGCCCCACCATTGGAAGCCCC
TGGATCTAGAAGTCAAGCAACACTCGATCCAACACAAAACCTCGCGAGAATCCACAACCA
CACCTCATCACCGCCGACGACCATCGATCATCATACGCCCGAACACCGATGTACGTGCTC
ACTGCATTCCCACTCCGGGACCAAGATTTGCACTTGACTAGGGATCCAAGACTCCTTGCC
AATGGCTTGGCGACATGAAGACTCTGTCAAGGCTTAATGGCACAAGGCGGTGAATGGTGG
ATGTTCTAACTAGAAGGCCATCGCTTCCTTGCTGATGCTCGTCTCATGAGAAGATTGGAA
AGAGCAAAATGCAAGAATTTTTCGCAACTCTGCAACCCCGATCGCCATTGTTGTTGCGGA
AATCGATGAGGAGGCTCATCTTTTGGCGTTGGCATGAGCCAAGCACTTGAGTTTTATTAC
GTTGCTAGAGTAGCCCCTTTGAATTCTCTTTTGTCGCATTGCGGCTTTTGTCTAAACATT
TTTTTTCAATCAACAAAAATGATAGTTCTTTTCCTTGTTTGTCCAGAAAAAGATCAGTTT
ATGAGCAGAACCACTCAATATATTAACCTTAATAACAGAGAGATTGAACTGCCCTGTGTT
CAGATGTATGATCCCCAAAAGGAAACATAATCCATCAATTATTATCACCATCCGGCAAGA
CCATCCGATTCTTGCCGATGGCATCATCATCAGCACGATCAAAGTCGGCCGTAGACATCG
TTGTCTGCCTCGAGGCCCAGGTCTTGACACGCCTTGAGGGGATATCCCTTGGACGCCTTG
CAGATGTAAGCTTCGAAGTTCCGGTAATTCTGATACGGACACAAGATTGATTCAAGGACT
AGCTTATGCACATATATATATATGGTAAAATTCAGAGATGAAACAGTCCCTTACGTCGAG
GAGCGGCTTGCCGTCGATAACCACCCACGGAACGAACTGGTGAGGCGGCACGAGCTCATG
TGTCTGTCTCCCGTACTCGAGCGAAAGCTGGATGGAAGATGCAAAATGCCAACACTGGTT
TAGCAATTCAGCATGTAAAAATGTATGTGGATGACGCAACAAACCCAGATACAAAGGGGG
ACGGACATTGTGGCCACGCTCGCCCTTGTAGCACTCCGTGACTGCCTTGGGATCAAGCCC
CTGTTTCTGGAAGCACGACTCCCACTCCCGGTGCTTGTTCTTCATCACCAGGTCCGACAC
GCAGTAAATGAAACCGAGATGCACTTTCTGCATAAAAAAACAGCTATCAAATTCAAGAGT
CGCTGTAGTCAAAACCTCAAGCCTCGGGCTCGGAGCAAAAAGGCCAAGTTTGGACGGAGA
ATTCTCCCTTACGATTTACGAAGATGTCATTGTTAACTCTCTCGGTTGTAATACTATTAA
GAAAAATTCTCGTTATCGTTATTGTATCGTGCTGATAGTGCACGCAGGACGCAGCCGTAA
TAATACAAGGGTGCTTGGATATGTTTTAGTCACATGACTAAAAGTAGTGGGACTAAAACT
TGCTATCCTCACCCATGCTTGGATCCAAATACTAAAGAGACTAA