| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1562454
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_12061 |
4 |
1365 bp |
MLOC_12061.2 |
Available |
Available |
LOC_Os08g44400.1, FRAME:-1, EVALUE:1e-148, 13108.m04821 protein glutathione S-transferase, N-terminal domain containing protein, expressed |
CDS Structure of MLOC_12061
Contig Sequence (7154 bp)
>contig_1562454 7154 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCAAAACAAAACATATAAGAGGAAACGTATACCCACCTCGTATTATA
CACTATTATACACTACAGAAAGACATACGTATAGATATGCATACAACTATAACAGCAATG
TGTATTGTTCTCATGCCTCTCTCCTTTTTTCAGTGATGGTCGGTAAGGTGATCCATGTGA
GGCGAATAGTAGCATGGGAAAGGTTTGTTTTGGGGAGTGGGGTATATATAGACATATAAC
ACATGTTGTATAATAACTATTTTTTGCACGGTTGATCGAGCGTATGAGGATGATAACGGT
TGCCCAACTGTCAACAGAACCAAACTTGCCTCGCTATTTGGGCCTGCTTAACCTTTACGT
GGTTAAGACATAAGACTCACGAACGCTGGGTATCCGATCGATCTGTTTACTGAACTACGG
GGGGCAGCCAAGTAGTGGCCAACTCCTTACAAGCCAAATTTTGTTTCTCAGTGAGTTGGA
TGTCATTGAAATTATCAAATTCTTCTGCAAAAGAGCTTCAAATTCAGTTTAAACGCACAC
TGGATTTTCAATTAAAAAGCACACTAGGATCACACATAATGCAGTGTAATGTAAAGATTT
TTTTTTCCTGGGTGTGTGTGTTCAGCACGGCATGTCCATAGCATGGAGCATGTATATTGC
TCCTGGTCTATCCCACTAATTCTTGAGTCGTTCAGCTTATCAAAGCGATGCCCATCATAG
AACATGACAATTAATGTGGCAAGCGTGGACCTAATGTCCGCCACTCGCATAATGTGACAT
ACGCCAAAATCCTAAATAGGATCAAATTAACTTTTGGGTATGAAGGCAGTAGGTCCGGGT
ACTAGGTACAGCTCTTCGGCGACGTTTTGGTACGAAGGCAGTAGGTCCAGGTAATTCGCT
GGATCCTGGTACAATAGGATCAAACTTTTTGAAGTGGTGCCACTGCCTTAGGTGTTTTTG
AAACATTTTGGCTGGCATACAAGTCGTCATCGCAGAGAGCAGTCGTGGATATCCGTCCAG
ATATAGTTTTTTTACTCCTGCTGAGTGCTCTGCCAAGCACTGAAAGCAGAGACGAAACAT
AAGCCTCTCAGTTCCCTCCAATATCTCAACTTGCACGGTGATCTTTGGTATGTAAAAGTT
GAATCTCAATTTCTAGCTAAAGAAGCAGACGACCGGATAATGCAAATATGAGATGGTATA
TAGTGAGCTCAATGTGATCTTTGTTACAAAGAAGTTAAATCTCAGTTCCTGTCTACATAA
GTAGTGGGCCGGATAGCACAAGCCCATGAATGGATACGGTGAAATATGACAGGGTATATA
TTGAGCTCAGTACCACTGAACAAACTTGGTAAGCATGCATGTGGTAAGTATGACACCAAA
TAACATGTAAGACTCATGAGCTATATTTCTCATTGGATTATTACTTAATTACGCGAAATC
TATCATCCATGCAGCATGTGTCGGGATTTGTCCGTGGTCTGTCACATCTGGATGATCATT
CTTAGATTTGATTTCATATATAGTAAGTTGTACACGGTGCAGAACATACTCGTCACATAA
TAATTTGGGTGCAGGCCATATGGCTCGTGCATTTGAGTGGCTAGTTTTATCTTGAATTAC
CATGTAGTATGATAATTTTGTCATGTCACGCCCCAAATTTTTGTTCATCTTACTGGTTAT
TAGATTACAACTTCACAGTATAACGTTGGACACGTGTATTTCCAACTGAGATCCTCAACT
TCAATTAACACTGGTATTCCTTGTAATTCATGAACATCGTCTCTTCAAAGTATTTCTAGT
TTTCTCTACAAAAAAAAGTACTTCTAGTTTCTCTCTGCAAAAAAAAAAAAAAATCTATCT
TCTACTACCTTATTTGCTTATGTATAATTCCACACATTACATATGTCTTCCTTTGCATCA
CAAATCCAACATGTTTTCCATGCTACAAAATTTCATCACCACATGGTTCCGCACCACCAT
AAAAAATCTCAAAGGGTGACAACTGAATACAACTTCTACATTACATTTGGGACTCCGCTG
TTAATTGTAAAGGATATATTCTAAATCCATACTATATATCAACGCTTCAGAGATTTTGGT
ACTGAGGATAGAGTGAATATGTTGCCCTCAGGTACTCAACGATCTCAGCGCTTTCGAACA
TCTTGACCCCCGTGTTAGGATCCTCGATATAAGGCGCCTGCAAAGACAATAAGATACATG
TCACACAATACTAGGCCATGCGAATGCAAAGGTTTAGCAAAAAGATGAATCACAAGGTTC
CAGACCTGGAAAATGCCATGTTTCTTGAAAATTTCCTGTCGCTTGGGGCTGCCACGAGCA
CAACTGCAGCAAAAAACAGTAAAGTTAATTCCAGTATTGTTTGATGCTACAAAGATGTAT
TGTGTCAACAAGACTGCACCTATGCCATACATAAGTAGTACTTCCTCCGTTCCTAAATAT
ATGCCTTTTAAGAGATTTCACCAAGGGACTACATACGGAGCAAAATGAGTGAACCTACAC
TTTAAAATATGTCCATATACACCCTAGTGGAACCTCTAGAAAGATTTATATTTAGGAACG
GAGGGAGTAGATGTTATTATGGCAGAGCATTTAGCTATCTATTTACAGATGTGCCGTGAG
GTTTCCAGTATCAAATACCTGTGTAGCAAGTGTGGCAACTCCAATTCAACAAGGGCCTCT
CGTGCTATTTTACAGAAAGGGGATCCCTGATGACAAAACATGTACTGGTCAGGTTCTGGA
ACTGGTACCACGCAAGAACAAAAAAGAAATAATGACCCCAAATGCTACGGATAGGCAGGA
AAGAAGAATTAGACCTCGTATGCCCAGATCTCTATTGGCTGGGGTGGAAGCTTTGAAACA
GTGTAGTAAGATCCCTGCAAACAATATGGGTCAGCCCGGTTTGAGCAAAAACTTTCAGAG
GTCACATATTGTATACATGCTTATATGGTTTATTGACCATCTACCTTCCGTACACGCCAA
ATCATAGCAAGCCCTGCTGTTATTGTCTACAAAATAAGCAGCAAAGTTTCAACAATTGCA
CTTCTGATTATTAACTGATAATGAACCATCATACTTCAGTCAAACAGGAACAAAATCATG
AACATATGGCAAATAAACATCACCTATAAGTCAAAGCCTCAAAGGTGATTTGTTTTTGAA
CAAAGGTACAGGAAAAAACGAGAAAACAATAGCATATACTTTTAGATTATGGAATACTTA
GTTACTTACCGTTAATAGACCAAGCGATAGCATAATTGGAACACTTCCATCGCCTGAAAA
ACAAGCACAGTTGAAGGAGCTAACATGAAGGAGCCTGTCAGGTAAAATAAATGATGGGAG
TACAAACCGTATGTGTCCGCAAGGTATTTTATGATCTCATCTGATTCATACATGGCAACT
CCTGTGTTTGGATCCACCTGCAACATATGATTATCTTAAATGAAGATAAGTTGAGAACTA
ATTTAGCTTTCTTCACATAGCATTTTCTTTTGGGCAAGGTAGAAGAACATCGGATGTCTA
CTTACTAACGAATGGCCAAACAAACTGCAGCAAAAGACTGCAACAACATGACAAAAACAT
CCGATGTCTGCTTACTAATTAATGAAAAAAAAACACTGCACAAAAGACTGCAACAATATG
AAGAAAAAAAATATTTTGCCAGGAAACCAGAAGTTCAGAAATATTAAATACGCTCCCTGT
TCCAAAATATAAGAAGTTCTCTACACATGAAAAAGATTCACTTAGAACAAACCTAGAACT
TCTTACAGTTTGCAATGGATGGAGTATTAGTTAATGGTGATTACTCTGGGATCATGCTTG
TTTGGCATATATAGTTCAGATATCACATTAGGAAGACATGTAAAACTGGATATTGCAGCG
ACACATATATAACCCAAGAAACCACAGAAGTGGTGAGGCTGTGAGGAAATTCTTGCATAC
CATGTAAGGAAACCGTGTCTTCCCTCCCATCTCTAAAACCTTTGGACGAAATGTTGGCCC
CTTTTGAGGACAAGGGTAAAATAAAACATCAAGGTCCAGAACGGATACCATCTCTCTCAC
CTGAAAATTTTACATGGCAACCATAAACACCAATATTTTCCAAACAAGGAAAATGACAAG
TACAAAATGCAGATGCAGTAAACAAAAAGGACATTCACCTTTCGACAAAATGGACAGCTG
AAAGTTTTAGCCGCAAAGAAAATCAGAAGCAGAGGAAAATATTAGCCCTTGATATATATA
TATAAAAGATGGTCCAATTATAAATACGCAGGGAGTGCTAATTTTTCAGAGGAAAGGTAT
GAATCCCAACTGAAAGAAAGCACGTACCCTTCGAACTCGTATATCTCAATAGGTTTTTCT
GGCCGACGGCACTGATCTATCTTTGAGGTCTCCTTCACCTTCAGACCTTAAATAAGAAAC
ACACGTATTTGTGTACAACTCCATTAAACTGAAACATAATAGGCACTGAACAAGTACAGA
TGTGGAATTAGAGAAATTCACCTAGAAATTCCAGAGAATACTGATCTGATGGCATTTTGT
CAGCGGAGACTAGTGATACCGAGTATCTGCACATCACAGGCAGGTAGAAATGAGAGGCCG
ACCACAAGATATGAATACAGCTAATTGTGAGACGTAAGCTTCAAAATGTAGATGAATTTC
CAATTCGCGCTTCTTCAGGCGACTTGTTGTGCTAATTTTCTCGAATTATTGACACCAAAG
TAAACACGCATTGCTAGTTATTACTGACACGAAAGCAACTACACATTGCTAATTACAGCT
AATTATATTGAGATCAAAGTAACTACACAATGCTAATTACAGCTAATTATTGACATCAAA
GTAATTACACATTGCTAGAAAGAGATGAATACACCCAGAATGCACAGTGGCGCTCAATTT
GGCGCGCGAAACAAAACAGAGTTGGATATTACAAGACCAGCTGGAGGAGGATCGGATTTG
GAGGGGACGAACCCCAGGACGAAGAGGCCGGTGCCGAGGCGGAAAGGCAGGGCGAGGGCC
GCGCCGGCGACGCTGGCGAGCTGGCCATCCTTGACCGCGAAGCGCCTGGGCACCGGAGTC
TTGAACCCGGCCGGCGGGGAGAACTCCGGCGGCCCGTCGGAGGTGGAGGCGGGGGCGGAG
GCGGATTCGGGCAGCGCGGCGACCCTGAGGGTGGCCGACGCCGTCCTCCGGGCGCAGGTG
GCGGCGGCGGTGGTAGGCGCGGGGCGCGTGGAGAGGAACGGCGGGAAGCGGAGCGCCGCC
GTGGCCATTTACCCGCCGCACGCGGTGCGACGCGAGCGGAGCGGGAGCAGGAGGGCGCGA
GTGGACAGGGAGGGGTTCTCAGCTGCTCCAACGGGAGAAAGATATCCCCCTCCACGACCC
TCGACACTGCCTCAGTGGACAGTGAGCAGCTCTTTGTATGTAAGTATAACAATATTTTTA
TTTTTTCTGCATCTTTTATTTAAAAGATTATGAACTATGATCTTTTTCATTCAAAAATAA
AACATCTCGACGAAAATTCATGTTGAAGTATCTCCACGGAGCTCGATGCCTCTTCTTCAT
CCTGATTAGCCAGCTTTGGTTGTACAGTGAAGCTAGTTAATTAGCTTCATTTCTGGTATT
TATTAGAACAAAAATGCTAGACTTACGGGAACTTTTTATAAGATTTAACGGACTGGTCTT
TCTCCACACTAATCTCTCCCCCCCTGATTTTTGGGGTGGGCCCGCATCATCTTAATCTTC
AATCAATACATTCCACCTCATCTAAGCCTGTAAAACTCGCGTACGTGTAGCATTGCTCTT
TATTAGAACGGCTCACATGTTTGAAAAGCGTTCCTTGGAAAATAAAATATATGTATGCCC
CTCCTGCTCTAAGGTTTTAAAAACCCATTGATGATACGAGGGTTGTAACTGGGGGAAATA
TATGAGCGGGTCAGTTTCCTTTAATATCTACACCGGTGCCATGCCGACACAACAATTTCA
CCCTAGCTTAATACTCCATATATAGATGACATGTAGTAGATGAAAGCTGCATTCTGATTT
CTCAGTAAGCAATCAGATAGCCAAGTGGATCTTGCAAACATCAACCACGAAATATGATAG
GTTATATATAGAGCCTAACACACCAAGAAACATGACGATGAAATGAAAGCATGTAACAAG
TATGATAGCAAGGTACACAACTTATGAGCCTTCCTCTCAAATTTTGAACTAACGGCAAAA
TTTAACATGCTCCCTCTTGTTCCTTTTTTTACATATGAGGTAAGAAGGTATGAGTTAATC
ATATTACCAATTAATGAGATCAATGGCTCAGATCTATTATATACTCTTACCTCTCATGTG
AAAAGAGAGGGTAAGAGAGAGCACATTAAAACTGCTCTTGACTGATTATTAAGGGCAATT
TTTGTCCTTGTCAAATGTCTTCAACATGTGAGACCTGGCAACATTCAGTAGGAGAAGTGA
ATCAGTGCTATATTATTTCTTCACTCTATTGTTTCTTATATCGGTACCACGGACTTCTTC
ATGCATGACCCTTCTGTATTATATTTGTACTTGGCATGTCATGTCTTCATCGTACTGATC
TGGTAGTCTTAGCATAATGTTAGAAACAGTAGCAGCAAAGGTGTTATTTGTAGGTGCGAG
TAATCCCGGTAGAGTGAGATTGTTCTTATTTTACATGGGGTTAGTGACGATCATAACGGT
TGTAGAGTTTTAATATATTGTAATGCGACAGTAGGTCATACAAAAAAAATAAACGAAGGA
AAATAATCGTTAATCATAGACAAACTTAGATTTTTCCTTTTGTATTTTCCTCGGATGATT
GTTCACGCAGATGCAATGTGTTGGTACCACTAGTAGAAAAAAGGCCTTTGGATCGAAGCA
TTAGGGCCAGTTTTTTTGTGACTTTTTTGAGCTTCTAGAATAAGCTAACCCCTGCCCAGC
TTATTCTAGAAACTTAACCAAAAATATATTTTTTAAAGCCTACTAGTCAAGTCTTAATTA
GTAGACTTCTAAAAAAATAAATTTGATTGGGCTTCTAGAATAAGCTGGGTAGGGGTAGCT
TATTCTAGCTTATTCTAAAAGCCAACAAAAGAACTGGCCCTTAGTCCCGGTTGGCTTTTG
AACCGGGACTAATG
