| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1562349
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_12020 |
1 |
1336 bp |
AK368027 |
Not available |
Available |
None |
CDS Structure of MLOC_12020
Contig Sequence (9125 bp)
>contig_1562349 9125 assembly3_WGSMorex_rbca.fasta
CACCGCCGGGCCGGGCGGCGACGCCGGGGGCGGCGGCGGTGCGCGCGGCAGTAGCCGAGG
CGCGACACCTCGGCGGCGTGCCCGTCGCAGAGCACGCGGCGCAGGGGCTCGGCTCCGTGG
CGGGGCGCGCGGTCTAAGAGGCTGTCGGCGGCGAGGCGGGTGCAGAGCGCGCAGGGCGGC
GGCAGGCCGAAGAAGGCGGCGAAGCGGGCGATGAGGTAGGAGAAGACGCCGTTGGCGAGC
AGCAGCGCGATGAGGATCCACTCGAGGAGCGCGCAGGCTAGCAGCCGCGCCACCCTGCCG
CTCCTCCTGCGCACGCCCGCGCCGCGGCAGGCGCCCGACGCCACGGCCGGCTCCGAGGCC
ATCCAATCTCCCCGGCGACCGGAGGGAATGCTGTCGACAGACACGCCGGCCCCGCCGCCA
GAATTCGCCGTGGAACCGAAGAAAGCGCGGAAGAAAAATCCCTCTTTGACTGGAAAAAAG
TATCGGGGAACAGGGAGGATGACCCGAAAGCAATGCGATTTCTGGTGGAGCAACCGACCA
ACCAACGGAACCACTCTCACGAAGAGGAGGAGGAGGAGGAAGAAGGGGCCGGTTTCATGG
AAGAAAAGAACAAGAACGACAAAAACAGAAGAGAACAACTCTCATCAGCTCCAGCAGATT
GCGACGGGAACGGGATTCCCGGCGGCGAGCGAGAAAGTCCAGGAAATAGCAAGAACGAAC
ACCGGGATTGGAGGACGGTGACAGGATTGCAGGCGCCGGTATTCAGAGGAGGAGGGAGGA
GTTTGGTGGAGATGACGGAGGAGCCGGAGGCGGAGGAGACGAAGGAGATATGGAGGGGGA
GAAGAATAAAAAGGAAGGAGGAAAGGCGCCTGGCTCGGCTGGGGTCAGTGGCGATGCTGG
GCTGGCCGCTGGTAAATCCTCGCCATTAAAGGCGTATAATGGCCGTAATTAATCAGCAAT
TCAGCAGCATTAGCAACGAGCCGCCGGATGGCGGAGCGGAGGTGAACGTTGGGGGCGGGA
CGAGGGAGCCCCCTCCTCCTCCGCTCGCGACGGCGTCCGTCTCTCGATCTCCGTGTGGAT
TTTTCCGTTCCGGGGTGGTAGGTTCCGGTGGGTGTCCCCGGATGGATGGCTTTTCTTTTC
TCCGGAGACGTCCCGGTCGGACGACGAGACGCCGTCGCGTCAGGCGCACGGCTCGCTCGT
TTTCGTTTCGTTTCAGACCCGCGACGGCACCGGGAGGAATAGTTTTATCCAGTAAGCCGA
AGACGACCGGATCAGAGACATGTACTGCGACGATCTGGAAGGACGTGGTGGCACATTTGG
GATTCTTCTTGTTCTTGGCGACTTTGACCTGCACTGGGTACTAGTCCTACTACTAGTTTT
AAGCCAGCTGAAGCTCAAAGTATATTTTCCTTTTCTTGTCCTGGATGCCAAAGCCACTTG
TTGGAGTGTGGACAAGTGAGCAGGGTCGCCCGATCAACCGCGTCTTTTCTAGTGGGGGTT
GGTTTAACATTCGAAACAAAAAAATCCCAACCTTTGTCTACAAAACCTTAAGAGCGACCA
GGCAGCAAGCCTGGTAAGCTATCTCAAAAAACCTTAAGAGCGGACGGGCGATCTTGTTCG
AAACTCTTGGAGTTTTTAGACGATCCATCATCCATTTGACTTTTATTATACTCCCTCTGT
AGAACTGTCTAGTTCTTTTTAACTATAATTATATAAATACAGAGACAGTATAATATAGAA
GGAAAAAAATATCAAAAGGGGCGTTTTGGAGCTCGGGCTCTACGAAGCCCTATTTTTTAA
AACACCAAAATTCATCAAAATTCGGTTTTTTACATTAAAAAATCTGAAAATAAATATGGA
TATACATGAAGTCATACACACACATGTGTGTAAATTTTTAGAACAAAATACGTTGAAATA
AGGTCTGTGCAAAAAAGACAAATTTATGGCATTTTAACACATGGTGCTATTCATCCCAAA
AGTTAATGAATTTGTTCTTTTTGCAAAATCGCATCTTAAGGTATTTCATCCTGAATTTTT
GCACACATATACATTTCATCCTTGTGGACTTGCATATTTTCTTCACATTTTTTTGAAATA
GAAAATTTTTATTTTTTTCAAAAAGAAAGGGTGCCATGGAGCCCGAGCTCCAAAAGGCAT
TTTGAAAAAAAATCACACTTCCTTCGTTCACAAATATAAGATGGTATGACTTTATTCTAA
ATCATATGCATATAGACATGCTTTGGTGTGTTTGCTCACTCATTTCAGCGTATGTTTGTA
GTTTATATCCAAAAAACCCAAAAACATCTTGTAACAGTGAATACAGGGAGTAAGTCAGAT
CAAAGGAGTGACATAGAAGGCAGGTAAACAACGTCGAAAAGTGGCCGCGTCTCAAACTTC
ATGGATCGCATCTTCATGCCCGCGGTAACAAAAAAACACAAAAGTGGATACCTCAAACTA
ACCCAACACAAAAGATCGGTCTGGCACCAAAGGTCTTGAGTACCTACACATAAGCCGCCC
ACCCAAAGAGGTGAAGAACTTAGACAATTGCGTGTTGTGGCTACCACTTGCTTGGACGAC
AGGTCAGCAAACCCGTGCATCATTGCCAAAACTACGAGTGAGAACACAATGATTACCATA
AGATAAAGCAGACAACCAAAACACCACTAGCTCCTTGACATAGGTTACCATGGGTCGAAG
GACAACCCGAGATGGGGATGAAGCTGACAGAGATTCATTCCAAAATTACGTAGCCTCCGC
TGTCGAGGCGTGGTCTTTATGAACACAAGAAACAACCATAAGAAATTTTAACCTACCACC
CAAAGATCTAGTGTTTCCTGCCTCTTATCATTCAATAGGTCGGCAAATATGACGGGAACA
AGGGCAAACGATGATGGAGGACCTTGGTGGCTGGGATTTTGTCAATTGCGATAGTGGTGC
ATGGAGCGCGGGAATTTACGTCGCATCGAATTCATGCATTTATGGAGACAAATGAGTTGC
CTATTTCATCAACGAAAAGAAAGAACATGAAATATTCAAATCATCCCCCCTCCGGCCTCC
TCCCAACGCCCATGGAGCACGGGAATAGGTGTAACTTGAAATTAATGAGTTATGTTATCT
TCATCAAGACTAGTGGTTTGCTTATTTAAGCAACTGAATCCAAAGAACTCGAAATTTCAA
AAGCACCCCACCCTCACCCTGCCAGCCCTCACGTGCACATACGCGCGCGCGCGCACACAC
ACAGACATACATGGTGCGCTCAAATTTAGGTCAGGTGGCATTAATGCCATTGCATTTTCT
TTATCGAACCTAATGGTTTGCTTGTTTCATCTTTTAAAAAGAAAGAACACAAAATATACC
CCATCCCATCACCACCACCCCCAACATGCAATACAAATATAGCATCTCAACATAAGAGTA
CATAGAGGTCTTCCATCACAAAATACGGACAAACATATAGAGAAAGTTGTGAGAACCATA
AAAAATGGTGAAGTTAATTTATGACTTACTTGCTCAGTAGTTGTGTGCATATGCCGCCAC
CGCATGTTCAAGGTTGAAAGAGCAACTCCGTACCATATCCTAGTTGTTTTCATGGTTTAT
GACAAAACCACTTGAAAGGCTATTCCTCATATGCAGGTCCTTGGCTAAGTGGAAGATCAT
TGATGGCCCCAAAAATAACTGTTCTAGTTGTTTTCCCCATCAAGCTCTTAGTATGTACTC
CCTCCGTTCCTAAATATAAGACCTTTTAGAGATTATATTATAGACTACATACGGATGTAC
ATAGNNNNNNNNNNNNNTATAGATTCACTTATTTTGCTTTGTATGTAGCCTCCTAATGGA
ATCTCTAAAATGTCTTATATTTTGGAACGGAGGGAGTAGTTTCTAGGCATTTAGTGAATC
CAACATTAACATTGAGTATATGAAAACCGTACTAGGAAGAGGGGCACGAGCTAGAACCTT
GGTTTGAACTCCGGGAATATATCATAAGCCAAAGTTTCCAAAGTTCATTCCCTAGTCATT
CCCTTTGTATAAGTTTCTCTGAGCCTCGATACATTTGAAGATTTTCTTCTCGTACTACTT
AGCCACTTTGGGCTATCCATACTCAAAGATAAAGCGGAGTTTCAAAATTTTTGGAACATA
GTTCATTATGTTTTGGAACTTCCGAGTTGTGACTTAAATCTTCTATGTAAATTCTTGCTT
CAAGACCCGCTCTGTTTACTCTGGTACTACTAAGCAATTGGTTTTACTTGTAGTTCCAAG
GTGATCTATTCTCGGGGAAAACAAGCTACCTTGTTGTGGTTCGAACCACAACTCATTCTT
TCATTGGTACTTGTGAGTGATGTACTTCTCCTAGTTAGCAAACATTGCCCTGTCCATTCA
TTTTCTGAACTGGTATTACAGTTTTGCTGATTTTCCTACACCTAGAGTCTTATTTACCTT
TTTTTATTAATGGTCATATTTTATGTTCTTTCTCTATATTCTCTACCATGCCCCCATGTG
GCTGCAACCAATCTAACCCCAGCCCATTCAACCAAATACAATTTTACTTATTTCTTCCCT
TGCAAGCCACTCCATCCCACTTTACTAAACTTCATCTGCCTCTTACTATAGAAAGAGAGA
TATAGCGTGGGAAAATAAGAAAAGGTTTTATTACGTGATTGAATGTTCACTTCTTGGTTC
TTTGACAATCAATAACCCCCTTTCTTCAATCCCTACACCTCAATTTCATATTTTTTGCCA
CAACCATATTCTTGCAAGACAATGTTAATATGGGTTCTTGATAAAATCTTTGATAGAAGG
TCTTTAAAGGAGTTCTTATCAAGTGACTTTGCTAAGGTTATTACCCTTGGAGGGTGAGTG
TATACTAGACGGATAGAAATTACATTTGATCCTATCAGGTACTACATGTGAAGGATGCAA
GAGTTTATATGGGCCTCGAGATCACTCACTTTTTTTGAAGCAAAACACACACACTTTATT
CATTTGGAATAACCTAGCTTGATCTGACATGGAGGAAAAAGGGAGAGCCCGGACTAGTGC
AACTAGACCATATATACATCTAGAAACATACTCAAAAACTTGTTCTCGGAGTGGTAGTTG
TCGTTCGATGGTCCAAGATCTTTGAAGTATTATTTTTATTATGTTTGGAGTGGTTTGTAG
TTTGAATGAACATTTATATTATGTTTTGGTCATTTTTGCATGAAAATGTATTCGTGGGTT
TAGACATTATGTACATGCATTCGTCAATGATAATCCCCATCTCACATTATAAGCTTGAAG
TCATTCAGGGGCAAGGATTTTTGGCTCACACCTCCAAGGAGCTTGGATTTTAAAAAATAG
GAGTAAAAAATGTGTTTCAGAAAAGTCTGAAAAAAGACACACGAACATAGAGCTGTATAC
TACATGTGTGTAAAATTTCATGATAAAATATGTTTTTATCTGAGACGCACAAAAAAGAAT
CATGTACATTTATAGTGAAGAGTACATGCACTATAATTATATTTTTTGTAGCTCATATAA
AAATGCATTTTCTCATGAGACTTCAAGGAAAAGTAGTACACATCTATATGTAGTAGGCTA
ACGCGCTTTGTTGCGCCATTCTTCACTTGTGGGAGTATAAGTTTTCTTTCTAGTAGCTTT
TTTGGAGAAAGTGCTCTTTTGATCCGGAGCTCATATGCTCATTGATGAATTATAAAATCT
AAATAAATAGTTAAAGCAATAAGAAAATATGAATATTTTGTGATAAATATTGATGAATGT
TTACAATTCCCATATTTTTTGTGATGAAATGGCATTCATGGAGTTTTGTGCGAAAAAACA
AAATTGATGCTCCAAAACGCTTCACATAATAGATGTTTTGCACCATCTTTTTTTTCAGAC
CTCCACATATGTCATTTCATCACAAAAATTTACACATAGTTGAAACATTAATCAATGCTT
ATCGAAAAACAATTCAACAGTTTTTCATTTGTTTTCCTTATTTTACTCTTCATTAGGGAG
CATATGAGCTCGGGGTAAAAAACTCCATGATTGTCATTTTTGTATGTTTTTTTTATTTTG
GTTTATATGCATTAGCTTGGTTTTAATTTATGTTTTGGTGGCGCTTTTATTCATTTATAT
ATTGTGTTGGGTGCTGCTAGAGACAATATTTGTTTTGAGAAGAGACTGAAATAGTTCGTG
CGTGATTGTGTTGATGGTGATCTTTCTGTGAACCCCTTGACAGCTTCTATTCCACGCTAA
AAGCATGAAGTTATTGCTATAATATTCACAGGATCGACCAACAAGGCTCTCACTCGCTTA
GCTCGTCTTCTAGGTCTGCCCGTTGGCTTAGCATTTTTTTCGGCATGCTCCACTCTTATC
TTATAAAATGCAGGCTATATTTTTTCATTCAAACAAGTTCGTTCATAATAAAATGCTCCT
GGATTTTTCTAAATGTTACAAATTTAAAACCTATGAATTTAAAAAATGTTTACAAACTTG
AACAAAGTTGAAAACAACTAAAAATATTTACAAATTTAAAAATAATTCATGAATTTTAAA
GAATTCATGAGTTAAAAATATGTTCACAAAATTCAAAAAATCTTCACAAATTTAATATAT
TTCAATGAATCAAAATATAAAAAGAGGAAAAACAGAAAAGAGAAGCATCAACCAATGACA
AACATCCTTACGGGCGGGGCCTCCAATGACCCCACAAGCCCTAATGCACTAGTAGGCTCC
AAATCTGGAGAGCATAGCATCTTATTATTAATAGATAAATGTGTGTATTTTTTAAAAGAA
TATTATAACTTAATAATTAGAGTTTCTAGCTCTACTTTGTATGTTTTTCACCAGAAGTCT
TCTCTCACTTTCGGAGCTCTCTTTGTCACTAGTTTGAAAACCGACAAAGGCGACTTCTTT
CCTTATTTGCACCTTGATGCACCTTTTCGTACTCAATATTGCATGAGAGCAACTCATCGG
TACCATTTGTCTTGATTCTTCACGTTCTATAATTTGGTATCTATGCAAACGACGCACGTA
TAGACATGCTCGACACAACAAGATATGGAGATACTGGAGATGATAAATGTGGGTTGGAGT
GGGAACTGAATGCAATAATTCTATGAGATTTGACCGTATGAAACTTTAGTGTCCTAATTA
GCAATATGAGAACAGAAACTCAAGCCCATATCATTTAATATATTTTATTATTATATAGTG
TGGAATATTAGTTTAATATAAGGATCATGCATGCAATTTAAGGTGAGCCTTTTCCCATGC
ATTGTAACATAGTTGAATGTTGAGAGAATTAGATTTAGTAAGGTATACATGGTGGCATGA
CAAAGTGACATAGTTGCATGTCAAAATGATTGAGTTAGTGAAGAACAACTATTTAAGTAT
ACAGAATGTGGGAGCCGAGGTATGGAGTACCTTGGAGCTTCCACAACAGGAATTGCCAAA
ATCCGCCCCCCAATCGCCCGCGGACGCTGAGCGGAACACACAAAAAAGATTCCACAACCA
TAAACACCATTTACAAATCACCAAATCCATATTATTACATTCAACATAAAACTAACTCTA
AGCAAAGCTCATCTGGCTCCGTCGTGCCTATGTCCGGCGATCGACCGTGCCACTTGGAGT
GTTGGTACGGTCGCCGACGAGGTAGAGTAGGAGATGGGATACATACCATCTCGCGGGACT
CTAGGCGCCGCCATCTCCCATACCCTACTCTTCCTCACCAGAGTCTGGAACTTTCACGGG
GCTAGTGGAGGTGAGATTTGATGATGGATTCGTCCTCGGATGAGGCGGCAATGTCCATGA
CGACGCAGTTGCGGTGCGTGGGCTGATGCATGAGGTCTACGATGCAACTTTATTCTTATA
GTCTTTGTTGGGCCTCCAAGCGAGAGTTCTATAGGAAACAACATTTTTTCTTCAAGTGGG
AGGTGTAGTATGAAGATGGTCTCTCTCAAACAACCGTGCAATCAAATACAAGCAATCTCT
TGTGTTCCAAACACACCCAATACAATGATAAGTTGNNNNNNNNNNNNNNNNNNNCGAAGA
GATGGTGATACAAGTGTATAATGAATAGTAAAAAAAAATTATCTGAAATAATAAAAACAT
CAAGGTATCAAGTGATAAAAGTGAGCACAAACAGCATTGCAATGCTTGAAAACAAGGCCT
AGGGTTCATACTTTCACTAGTGTAATCTCTCAACATCACTAACATAATTGAATCATAAGA
AAATCCTTCATCGTGCGGTAAAGAATCACTCCAAAGTTACTATTTATAGCCGAGAACAAA
AGATAAAATTGTTGTAGGTAGCAAAAACCACCTCAAATTTATCCTTTCAATCAATCTATT
GAGCCACCCCTAAGTGTCACGAATTTCCCTAGAGATCATACTATGATAACACCATATGAT
ACACATCAATCAACTCTAATGTCACCAAGAGAACCACATTTTCACCTCGAGTCTCCATGA
GTTCAGTATTTGATATGCATCAAACAATCTCATATTCATAATATTCAATTGAACATAAAA
AAACTTCAAAGAGAAGGACTCAATTCATCACAACAAATATAGAAAAAACATCATATGATC
CAACTATATTAGCAAAGCTCATGGTACATCTAGATTGCACCTTATCAAGATCATGAATGT
CGGTGTCAAAACTGGGAGGCCTCGGGTAGGGGGAGGTTTGAGCTGTTAGGTCGGATCGAT
GGGTAACAGGAGACAAGGAACATGGTGTTTTTACCCAGGTGCAAACCCTCTTGATGGAGG
TAAAACCCTACGTCATGCTCTTGTTTATATTATGGGTGTATCGAAGTATGCAATTGATCT
ACATCGAGATCGTAAGTTATGGTCTAAAACCTAGGTATGAAGATGATGATTGTCTGTGTC
ATAATGATCTATCGACTAGCCTAGGCTCGACTTATATAACGCATCGAAGGCCTAGGATAA
CAAGAGTCCTAGTCAGTTACATGAGTAGAGAGGAGTCCTTGTCTTGATCACCAAGTCTTA
TGGAATCCTCCTCATATATGTCATGGGATGCCCGAAGTGGCTGATCACCCACAAGTGTAG
GGGATCGTTTGTAGCCTTTTTTACACTAGTGCAGCGACGTGCTATATGATGTCTACTACG
CAACC
