Contig Data
morexGenes
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Map Locations of contig_1562230 (4658 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1562230

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11957 1 997 bp MLOC_11957.1 Available Available None
MLOC_11958 1 519 bp None Available Available None
MLOC_11959 1 662 bp MLOC_11959.1 Available Available None





CDS Structure of MLOC_11957






CDS Structure of MLOC_11958






CDS Structure of MLOC_11959






Contig Sequence (4658 bp)

>contig_1562230 4658 assembly3_WGSMorex_rbca.fasta
ATATTTATGAACGGAGGGAGTATAAAGGTTACCGTGTATTAAAAATAAATTGACCATGCA
TTTTAAAGGAAAAGACAAAATGGAAAATAAAAAAGGAACAAATATAAAAAGAAGAATAAA
ACAGAACAAAGAGAAAGAAAACCCACTGAAAACCAGAGAAACAGTGAAAAAAATCAAACA
AAACCGCAAAATAAAATCAGTAAAACCACTGGGAAGCTAACGAACCACCAACTTAGGCTG
AGGCCCAGCAGCGAGCGCTCTCGCTAGCCTAGCTTCGGCCCTCGACTACTTATTCACGGA
GTTGAGATTTGGTTGAACCCCTGCCCTGTTGCTGTATCCCCTCTTCCTCTCCCCCTCGCT
ACCCTGTCTTCCTCCTCAAATCTTCCTCTCTAGCTGATTCAAACTCACATTTGTGAGAGA
TATCCAGTGGTAGAGGCCAGGGAGGGGAGCACAGCACGATGGCCCGGGCATTTCTGGCCT
CCGCTGCTGCAGCGGCCGGCTGCGGGACGCAGGCGCAGCAGACGCCGTGGCTCCTTCTGC
TGCTGGGGGCGGTGGCCATATCGGTGACCGTCCTCCTCTGCGGCAAAAGCTCCGAGAAGA
AGAAGAAGGCCAGCAGGGCACCGCGGGCGGCGGCGACCACTGCAACTTCGTTGTCGACCA
CATTAGCCGACGGCAATACAGCCCTCTTTCTTGCTGCGGCGGCTGTAGCTTCATCTAACG
GAGGCGGTGGTGCTTGTTTTGGCGGTGGCGGAGGAGGCTGCGGAGGGGGCTGTGGCGGTT
GCTAGCTACAGGAGTAGCATGCGTCAGCTGGCGTGCAGCTGCAGCGCAGGAAGGCATGGC
ATTAGCCGGAGCCGGAGTTCTGAGCTGCTACGGGACTCTCTATAGTACGGATCCCTCCCT
GCAGCTACTACGTACTTAGTAGTCGATCACAAGATTTGGGGCTATTAGCTTGATGATGTA
TTGCAAGAAACATTTGGTACTGTAATGTAAGAGATTGCGAGCTTGATCTCTCAATCATGG
CTCTGCAAGAGCTTATCTTGGTTATCTAGGTTCCAAAGCATGCATGTTCCTACCGTTACA
TGCTTGATTTCCACTGCTGTTTTTTTCCTTCTGTTTGTGGGGACGATTTCACTTCTCTTT
ATCAGTGTGATGTTAGAACCAGAATGCATGTGTCATTGGCTCTATCAAGTGTGCAATGAA
CTCAGATAAAAATAAACTATGCAATGAACATTACTACTCATGCAGAGCAATTCTTTTCTG
TTCGCAACGATCTGAAATCTGAAATCCCCGGTTTATCGTGTTGTTATATATTATTAAGGC
TACTAGTTAGGGCCTTGTCAAATGTACTAGTTGAGCATCAGTCAGTACTAATGGCTTCAA
GGAAATACCTTCAACACTAGAATTAGATCTAATATAAATGGTTCGACCGGATGCATGTTA
TTCGGTTGGACGAACAAAGCTGTGACCTCGAGATATATATCATCAACACGGTGATCTCAA
CAATCATGTTCATCATCATCATGGACACATGTACATGGAGTCATGGTCCATGTTTGTTAT
TTTGTTTGACACATGCGGCTGCAGGATGCGTGTGAGCTATGATCCTCCCATTGCACCAAA
ATGTTTTGGATGCATGTTCCCTAGCCTACAGCAACATCACGCATCATGTGCTGATCGTCC
CATTGCACCAAAATAGAAAGATGAAATGCGATGTGACGAGTGCCAGCAAACACTAGCTAG
TTACTGCACCATAGGTTTTTTTTTTGAAACTTCTAAATGTGGGTTTTGATTTTATTTTAT
AAAAAAATGGTATGAAACACCAAGAAACATTGTGGTGCCCAACTGAACAAGTCGATTTTT
TCAAGGCAACAGTGTTAAAAAAATATAAAGGCAACACAGAAGTAAATCATTATAATTAAT
GCACCCCAAAATACGGGGAAACCCAACAAAATTGGTTGAAGCACAGCGAAACACAATAAG
ACATTTGGTGCACACCGAAAAACAATAAGATATTGTGGTGCACACTGACACAAAAACATT
ATGGTGCACTCTTAAACACGACGAAACACAACAAAATTAGTTAATTATTATTCTTGAATT
ATAGGAAGTTGAATTTGTGCGTTACATGTTAGATGGTGCACTAAATAAAAACTAAATAAA
AACCATTGTCCATACGAGTAGTTAAAAATATTGCATTTATATCCTGAATAGATCATTTTC
AGAAATATATTTAATATTGCTCTTGGTTTAAAGAACTCATCGGAATAAACACAATTGTTT
GAACAAAATGTGAATCAAGCTTTTGTTACGAAAGATATCAGGCATCTAATTTTGAAATGG
AACTCAACTTGTTGTGCCTACCTTGGACAGACAATTGGCTTGGTTGATACTAGCTAGGAT
GTTCGGTGAGAGAAATCACAATGCATATCCCAATGAAGCATGCAATGGTTGCTCCATTCA
CGAAACAGTCTATTCACCTTATGCACGACAACGGTGGTGGGGCTGCTTGCATATGAATGT
CCAAGCCACTGAAAAGATAAGGCTGCAGTAACTAGCTAGTGTTTGCTGGCACTCCTCACA
TCGCATTTCACCTTTCCATTTTGGTGTAACGGGACGATCAGCACATGGTCGATGCCTGCT
GCTGCCTGCTGCTGTAGGCTAGGTAACATGCATCCAAAACATTTTGGTGCAATGGGACGA
TCATAACTCACACCCATCCTGCAGCTGCATGTGTCAAACGAAATAACAAACATGGACCGT
GTGTCCATGTCCATGTCCATGTCTCCATGATGATGATGAACATGAGCGTTGAGATCACAG
CGATGATGATATATTGAGGTCACGGCTTTGTTTGCCCAACCGAATAACATGCATCCGGGC
GAACCATTTACTTGATCTAAATTCTAGCGTTGAAGATATTTGCTTGAATCCATATACTAT
ATTAGTAAGCTCCTTAGGATTGAAGGCCCCACAATCAGTTGAGGTCTCCGGTTAGAATTT
GGTCATCCGATTTTGATCGGGTCAACAATTTTTCAAAGCTCTTTCATTTATTTTTTTATA
CAATACACCTTGCTTCATAATTTTTAAATCTTCATAACTAATTGAAATTCAGAATTGGAT
CATCCAATTTTGACCGGGTCCACAATCTCTCAATGAGTATTCTCATTCTATTATTTTTAT
TTAGATGCTTCCTAATTTTGGAGCTCTCACATTTGATTGACGTATACAATTTTTAATTTG
GTTCGCATTTTGAAGGGATCGAGGATTACTCAAATAAAAACATATCAACCCAGTGCACCC
TCTCACCTCCTAGCTAAATGTAGTGCCAACATGTAATATTGTAGCATCAGTATAATACTT
GTAGTTATTGATGCAGAAATTTTCTCCCATAAATATGGATTGATTAGGAGATAACATAGA
ATCACACCACGCAGGACCAACCAAAACACCGTATTAAATAAAGAAAAACAATACTTCATC
ATCTCGCCCACTCACCAAACCAAATATTCCCTCAATTCCAAAATTTAAGTGTTTGAAAAG
TCAAATTTCATATACTTTGATCAGCAAAAAATATTAACATTCACAATACTATATTTGTAA
CTTAATATAAGACTTTTTTGACATAGACAATGCCAAAACATGTCTTATATTAAGTTATGG
AGGGTGTACTAAATAAATAAAATATGAAAATTATTTCATGATGAATCCAGTGATGCTGAT
TTGATATTATGAATATTGATATATTTATCTACATATTTGTTCAAACTTAAAAAGAGTTTT
TACGTTTCAAAAAACAAGTACACCATATATTTTAAAAGAGAGGGAGTAAAAAACAACAAA
CTCAACAACATCAACGACGCAGCAAAGCGCGTCTAACCCTTCCACTGATTACTCATGCTC
AACTAGTCCATTTGACATTGCCTCTATGAAGTGCACAATTGACTTTACTACCAGGCACCA
TAATGTTGCATTATGTTTCTTGTGGTACGGGCCATTTCCTATAAGTTTCATCGTGTTTCA
AATTTGTCAAAGCATATTCGATATGGGCTTGCTTTGAAGATATCATCGGTAGAAAGACAC
ACGTTCAAACATAATATTTGTCCAAGATTTGTTTCAACACACACAACTGATTAGTAGTTT
AAGAATAAAATTAAAATCCATGTACTAGTGAGTGGGAGAGAAACTTCATAGTCTTTTCTG
CGCACTTTGTCCTCACTCATGCGCGCCCGGGATCAACTTCCCGGTCGGTAAGCCATCCTA
AAACTTCTCCAAGCTGAGCACGCTTGACCTGAGAGTTCTGTTCGAATGGGCTCCCGGAAA
AGAAGGAACTACTTATTGATATGAGTAGTCTATCATCCTTAATAAGCTAGTCTATCACAG
CTGGAACCGGGACTAAAGGTCAGTCTTCTGTCCCGGTTCTGGCCACCAACCGGGACCAAA
GAGATGCCTATATATACCCTCATGCCAACTTCAGGGTCATTTAGCTCAAAAAATTAGTAA
ATGCCTGAAAAATACCAAATAAAGTTAGAAAGGGTTGAAAATTGATGATGTGATGTTGAA
CGCACAAAAAGTCTGGAGTTGAAATAAGTTCAGAAAAATGAAATTCGTTTGTAACAGAAG
AGATTCCGTCTGAAACCTTGATACTTCGAAAGAGATTG