Contig Data
morexGenes
Links



Map Locations of contig_1562081 (4055 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1562081

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11890 8 4011 bp MLOC_11890.6 Available Available LOC_Os02g50240.1, FRAME:+3, EVALUE:0.0, 13102.m05701 protein glutamine synthetase, catalytic domain containing protein, expressed





CDS Structure of MLOC_11890






Contig Sequence (4055 bp)

>contig_1562081 4055 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGAGAGGAGGAGGCGGGATCGCCCGGAGCGCTGGGTCGTTTTTCCTCGATGCT
AAATTCATGGGGGGTGCAGATTCGTCGTAGCAGTGTTCCTTTTTTATTTTTAATCAGACG
CTTTTTCGCCCTCGCGATCCGCGGGCGCAGCGAGGCGGGCGGCGGTGCTCCCTCGTGCGG
GCGGTGAACGCCACCTTTCTCGTCGGGAAATACACTAGGTTTCCGGCATGGCAGCGCGAC
GGGAAGAGGTTTTTGGCGGTGATTTATTACCCCCGCCCCGTTCCGGATACGCGCGACGCA
AGGATGGATGGATGGATGGATGGATGCGCTAGTGAGGGAGTACCATATTCGTACCGGCAG
TACTACGTTTTGTCCTGTTGGGGGAGAGGATCTCTGCGGTGGCATCCTCTGCCGCCCGCC
CCCGGTCCCTCCCCTGCGCCACATGGCCCCGGCCCGGCCCGGCCCGGTCAGATGCTCTGC
TCCTCCTCCTCCATGAATTTCCCAGATGATCTTCAGCATGTCACCGAGATCGATATTTTC
ACTGAGCTCGGGAAAAAAAACCGTTGTGAACAGTAATAAAACCATGCGCGATCGTGAGTT
TCGGTTGTGCTGGTATATTCACCGTGTATTTATTTTGGATTTATTGCAGGATCGGCGGAT
CTGGCATGGATCTCAGGAGCAAGGCCAGGGTAAGATGCATATACAGAGGCATACATATAC
AGATAAAGATTCCCCTCCCCGGCCGGCATGGCATGGATCATTCCCATGACCTTGCTTGCC
GTGTCCTATCACCTTTTTGCTAGCTAGTTATCCACCACTGAGCTGTTCTTGTGCTTATAT
ATCAGAGGTTGCCAGATTCCTTTTGGTTAACAGCGTGCGTATTATTTTTTAACTGTTGCT
GCTGCTGCTGCTCTGGTTGGTGCAGACCCTCCCCGGCCCGGTCACCGACCCCAGCAAGCT
GCCCAAGTGGAACTACGACGGCTCCAGCACCGGCCAGGCCCCGGGCGAGGACAGCGAGGT
CATCCTGTAGTAAGTGCCGTCTCTCGTGCCACCCCAGAACTATTTACCTCTGTCAAGTGC
AATTCTAGTATCACCTTTTTTTTTTTAACCTTGGACCCGAGGAGTAATTTTTGCTTCCCT
TGGGGCATGTGCCATGCTGCAGCCCACAGGCCATCTTCAAGGACCCGTTCAGGAAGGGAA
ACAACATCCTTGTAAGTGACCACTCCACTATCATCATCGTGTGTACAATAGACTGTAGCA
CTGCTGGCCGCGCAAGTGATCTGCACCTGTAGTACTAGTAGGAGTGTTTTTCACTGTAGT
CGATTGATCTATAGCTCTTTTGGTCAACTACGAAGATTAACGAGCACCATTAAGAGGGGA
GATCAACTTAACTATCTTCTCATGTACTACTTGGTGCAGATTTTTTTGGTGCAGTATTCA
TACTAGCTGTTGATACTCCTATTTCTGACGCAAATTGTATCCCAGTCAAGGACCATCCAG
GGTTGTGAATGAATTGTTATACGTATTTTTGGTTATTAATTAGGTGTGATTGTCTGGTCC
ACCTAATAACTACAGTAGAGAGGGAATCCAATGGTCATCATCTTGTCAACATCCTTGATG
CCAATCAAGATCCCCCCTTACTAAATTCGAACCACTTGCAGGTCATGTGCGATTGCTACA
CCCCAGCTGGAGAGCCAATCCCCACCAACAAGAGATACAACGCTGCTAAGATCTTTAGCA
ACCCCGATGTTGCCAAGGAGGAGCCATGGTATATATAATATACGAAATTGATCCATGATT
ACGAACGCTAAAGAATAATGGTCTAACTGTTTTTATGATCATAATTGATCGACTGGTCTT
TCTATTGTTTGTGATGATAGGTACGGTATTGAGCAGGAGTACACCCTCCTACAGAAGGAC
ATCAACTGGCCTCTCGGCTGGCCTGTTGGTGGCTTCCCTGGTCCTCAGGTACGTCTCTTT
CAGCTTGACCGGCTGAATTTGGACATTTGGCCCTAATTTTGGTGAAGTGTACACTTACCA
ATCACAACTTTTTTTGTGTGTAGGGTCCTTACTACTGTGGTATTGGTGCTGACAAGTCGT
TTGGGCGTGACATAGTTGACTCCCACTACAAGGCTTGCCTCTTTGCCGGCGTCAACATCA
GTGGCATCAACGGCGAGGTCATGCCCGGACAGGTGAAACACCACTACAACGCAGAACATT
CCTATTTTCTGTATCTTGCAGAATTAGCACCGTCTTTCTGACCATAGTAGAATTATTATG
TTTGGTTTTCAGTGGGAGTTCCAAGTTGGCCCGACTGTTGGCATTTCTGCTGGTGACCAA
GTGTGGGTCGCTCGCTACATTCTTGAGGTAATGATAGTCTTCATTTAAAGATGATCTAGA
ATAGTCATGTGATCTTATCCTGATAAGGCCCTTGTGGTTGAATGACAGCTCAAATAGCTT
TAGCATTCGGTTAGAATTCTCGTGATTAAATGTCACTTTCCCTTTTGTTTTTCAGAGGAT
CACCGAGATCGCCGGAGTTGTCGTCACGTTTGACCCCAAGCCCATCCCAGGCGACTGGAA
CGGTGCTGGTGCTCACACGAACTACAGGTAATTGAGATTGAGATACTCGAACTGATGAAT
ATGATCCGTTCATCTTACCGTGCTATTTTGCTGACGGCGAACGACTCTGCTGCATCCAGT
ACCGAGTCGATGAGGAATGACGGTGGGTTCAAGGTCATCGTGGACGCGGTCGAGAAGCTC
AAGCTGAAGCACAAGGAGCACATCGCGGCCTACGGCGAGGGCAACGAGCGCCGTCTGACC
GGCAAGCACGAGACGGCCGACATCAACACCTTCAGCTGGGTACGCCCCCACCTTCGCCTT
CTTGCTCCTGAATCACCTGAATCTCGTTACTCCAACAGTGGTTCTAAAATGAAAAACGTG
TTGCTTGCTCTGCAGGGTGTGGCAAACCGTGGCGCGTCGGTGCGCGTGGGCCGGGAGACG
GAGCAGAACGGCAAGGGCTACTTCGAGGACCGCCGGCCGGCGTCCAACATGGACCCCTAC
GTGGTCACCTCCATGATCGCCGAGACCACCATCCTGTGGAAGCCCTGAAGCTCCGATCGC
CGTGTGATGGACCGTCGGTGATGGGGTCCGGTGGTGGCCATTGGAGGATTCGTGCCTTGG
GCGAAAATTCTTCCAGCATTTTCCTTTTACGTTTGGTTGCATACTACTCCTAGTCCGCTT
AGGTAGGTCACATCATCATGGTCATCTCATCAGGGTGTCTGGTCTCTCTTCTCGTTCTCG
TCTTTGGGTGGGTGGTGGGTGATGGGTGGCAAGGGGCGTGTCAAAGCACAAGATTACTAC
AGTATTTGGTTGATTGTTTTCCCTTGCCGTCTGGATGCTATGGTCTCGTGTAATCATCGA
TTGATATGGTAATAAAATGGTCCGTACCGCAGCCGTGGTACCACGCCGCTTGTCTCATGC
TACGGATGGACGGATGTTATTAGTGCTCACTAACTTCTCGTCTTTAGGTATGCTTTATTG
TTGCCACTTTGTGTAAAGCGGTTGCTGCGCTTCCAATGGTCGTGGATGAAGCTTTAGGTG
ACGGTAGGCCATTAGTGCGCCAAAGAGTGGAGAGCAACATTATGCCATGGGGTCGCTTTT
CCTTAATGTCCACAGACTTGCAAGTATAAAATAGATAAGTCCTAACATAAGTTTCGGACT
TGGAGTATGTGATCCCCAGCTCCAGTGATCTCTGATGAAGAAACTTTGGAACATCAATTT
TTTTCGCACCTTTGCAAATGTAATTTTTCTACATCGATGATTCTTGGCAAAAAATAGATC
AGATTTTCTTTCTTCTATTTTTCGGATTTTACCTTTCATATGGGATCACACGATTGCTTA
AGCACGCTTTTCTTTCAGGGCATCTCCAATGGTTGTAAGGTAGTTGTTGGTAATTTTGAC
ACATAGGATTTTTGATGATGTGTCATTGCAATAAATGAGGAAAGAGAACAAGGTTGTATG
TAAATTAACCAACACCCTTGCACAAGCTCCAATGT