| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1562036
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_11873 |
2 |
1719 bp |
MLOC_11873.1 |
Available |
Available |
LOC_Os08g01410.1, FRAME:-2, EVALUE:0.0, 13108.m00061 protein phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed |
| MLOC_11874 |
2 |
2919 bp |
MLOC_11874.1 |
Available |
Available |
LOC_Os08g01420.1, FRAME:-2, EVALUE:0.0, 13108.m00062 protein PHD-finger domain containing protein, putative, expressed |
CDS Structure of MLOC_11873
CDS Structure of MLOC_11874
Contig Sequence (9386 bp)
>contig_1562036 9386 assembly3_WGSMorex_rbca.fasta
CATGCGACGTTCCCCAACAATTCTAAAATCCACCCTTAAATTTTTGGAAGCCTCCCAGAA
AAGGAGGATAGATTATAAAATAACATGAAAAGGGGACAACTTATTTTGGCAACCACCAAA
AGAATTAGGCCTAAATAGTAGAAATGGATATTTTTGTCACATAACATGTCAAAAAAGAAT
CATACATATCCGCATATATGATTTAAATAAGGAAAACACTTAGAAACAACCAGATGATTT
CTCGCACGCCACGCGTCGCGGCGGACCTACATGGGATGCACCACTCGTTTTCTTTAGAGC
CACTAGTTTTCTTCCCATATTTTTTCTCCCTCGTCTCCTACCTCTTTCCTATCACCTCTC
CGTCCAGATCTCATTTGTTACCCTGCATCTGCTGACCTCCATCCTCTGTAGTATCACGTG
AGCATCGTCGTCCCAAGAACGTGGAGATCCATTGAAGACCTTGTTGCATCTCCTCCGACC
ATCTCACTATGAGGTTGCGTCGGCACCGCATCCGTTGTTACAACCTGGTGTGCACAATAG
GCACCATGCTACAGACGCCCGTGTTGCTTCCGTGGCCGGAGGAGATCCTTAATCCCTTCG
CATCAGTTGGTGTCGGTGGGTGGCAGAGATGCAGTTCAACGGGTCGCTGCCGCATGGCGA
CGACGCAGATGCAATGCAACATGTCGGTGGTGGGCGGCCGAGCTGCAGTTCAACGGTCAT
GGTGCTACGCGTCGGCGGCGGAGCTACAGTGAAACACTTCGGTGAGCGACGGAAGTGCAG
TGAAATGCAACAGGGCGTGGTGTTGTGTGCCGGCAGCGGAGTTGCGTTGGAGCACTCTTC
GGGTCATTGGAGCTCCGCCGCGGCGCGTCGTTGGAGTTGTAGTGAATCACGTCGAAAGGT
TGTTCGTCGAGGTTGCAATGGAGCCGCCGGTGCGATGGGTTGTTCTACGATCGAACGAAC
ACCTCGATTAGATCGTACGGCTCGCTAGGCGGATGATTTCCTCGGGGATCATAGCAGCTC
CTTTTAAATAAACAAGCCGTGCAAATGAAAAATACACATGATACAAAACCAGCCTGCGCA
CTACATCATCATATATTATTATTATTCTATACAACTTATATATAAGAGCTGTTTTTTTTT
AATTTTTTATTTTGCTAACCTCATGTATCATGGGGTTTATATAAGAGCTGTTGGCAACTT
TCGAAGTCCCGAAGCTTTTAACTTCTGATACTTGTCTAGTAAATTGAATTGAAACATTCC
AATACAAGGCGCTCGTGGCCTGATGGACAAGGCATTTGACTTCTAATCAAAGGATTGTGG
GTTCGAGTCCCACCGAGCGTGAGTTTTTTTTTTGCGTTTCTCTTTTTTTCCTTATCCACA
CTTATCCATTTCTTTTGTACAAATACGATATTTGAACGCTGTGTTTTTTTCCTTATCCAC
ACTTATCCATTTCTTTTGTACAAATACGATATTTGAACGCTGCACTTCACAGCAAGTCTG
AATTTCCGGATGCAAAATATGAAATAAAAAGCTACGTGCCTGTTCGGAACCTCTTCAGGT
CTTACAACTCCACTCCGCATGAGGAGCTCGGTTTGAACAACTTCGTGCGATTGTGCTGCC
GCTCCCTCCGCTCCGGGAGGTGTGGTTTTGGAGCCGAGAGGATCCGAGCAAGGCGTAAGT
TTACACCGAATCTATGAATCAGGAACATCATCACGGATGATGGATCTGGCGCGCGAACAT
CCCCCCTAAGATTGAGCTGTTTGCGAGGCGACATCTTCAGGATCCTGTGCTTACTAGAGA
TACAACATGTGTAAGCGAAATTGGGCAAGGTCCCATTTTATGTTCCTTCTGTGATAATGC
CGACACTGTGAGACAATTGTTCTTCGTGTTCAATTGCTAGGGCCTAGGGGTGGTTTGGGG
ATCTGCTGGTGTTGTGCCAAATACTAGCTGCCGTATTTCTTCTCTGCCAAACTTTTTCTT
CGTTTAGTGTTTTCCTCCCGGTGGGGGTCGTTTGTTCATGCTGGGCATTTCTGCTATATG
CTGGGCTCCGTGGAACATAATGAACATGGGTTACCTTTGATCATCATGTTATGCGTTCTC
ATCTTGAGGCGGTGTTCTGTGCTTGTTCCTCTATTCATGTGTAAGAACTTGTTACTTCTG
TTTTTAACGGAAACGCGCTATTAGTTCTTGGTGATGGCTGTTTGTAGCTTGTTTCTGGTT
CTCTATCTATCTCCCTGTTCCTTCTTGTGGGTGTCGAGTGTCACATGTTGTAGCCATGGT
GTTGTATCTTCTGTTTTTCCAATATATATGAAAATGCTTAAGGCCGGCTTTTGCCCGCTG
TAGTCATCACAAAAATTAAAAAAGCACTTCAGTGGAAACAAAATAATTGTGCCATAATTT
GGGCAACAATCTGCTAGCGTCAATGGTTAGGTGCTACTGCAAGCAGCATCCTGAACAATT
TATACTGACACGAGAAAGTATTTGTCCAGCAGCACAGACCAAAAAATGTCAGATCAGAGT
TCCACGAAGAACAAACCGGGTGCAGCAACTGACATGGAACAACAGCAAAATTAAGTCTGG
TGGATCAAGTACAGCATCGTTACCAACACCAAAATATGTATCCTACGAAACTTTGCTCTT
TCTAACCCCAAATGCTGTGTGTTTATTATTCCTATGATTGTCAAGAGCGCCTATATGTCC
TGCTGCTAGATCTTCTCTTGCTTTTCGCCTACGAGGGGGAGCATCTCCAACCGGCTTCTC
GGGGTGCGCGGGCTAGGGGTGGAGGCCTGCTGGGAGATCAGATGCCTCACATAGCCATAG
AAGGTGCAGCCGACGAGCGTGATCCCACACCCTACTGCGTTCATGGCGGAGATCGGGTTG
CGGAAGATCATCCAGGAGATCAGTACCGCGACAGCAACCTGCATGCCGATCATGATGCCA
GTTTGTCAGTGCTGAACTTGAACTGAAGAAGCAGAACAAAGAGGAATAGAGTCTCACACT
CTCACTCTCACCTTGAGATTGCCGGCTACATTGAAGGTCACCGCTGTCGTTGAATGGATA
ACATAGAAGATGGAGAAGTTGAGGCAGAAGGCTAGAACTCCTGAGGTGATTATGATGATT
AGTGCAGGGACGGTTGAATCATATGTGTAGAGCCAGTTGATTACGCCGCTCCCTTCGAGT
ACGATCGCTGGTATCGATAGTATCATGGTGGCAAAGGGTGCCATGTAGTACACGGTGTTA
ATGCTGCAGGGAAGAAAAGAACAAGAAATCAGCTCACTGAGAGGAAAATGAAAATAACCA
TCCTTCCCCTTAAATTCTTTATTGTAAAACTCAGACATGTCATATGTGATCTTTTCTTTT
GTGAACTGATCAGATCAACTTCTTACCTGTCAAATTTGTATCCATGGAGTAGGGACTCTG
CCAAGATAGTCTTTGTAGATGTGGCGAGGCAGCCAACCATGGCAGCGCAAAAACCAAGCA
TATTGAAGCTAAGCTCAGTTACTGAAGTTAAGAGGATTCCACCCACTATTGGAATCAAAG
AAGCCCATATGCGCCACTCAAAATATTTCCTCCAGACCAACCACTGCAGAATAACTGTTC
TTCAATGAATCAGAATATGCCGCAGCGGTCGCGCAAAGGGCATGTTGAATCGTAGAGCAA
GAAATGAGAGAACCTGTTGTTGCAGGAGTGAAAGATTTTATGGTCTGCATGAAGGAGACC
GGGATGTACCGCAGGCTGATATTTCCCAGCACGATGTTTATGCAGAACACAAATGACATG
GGGAATATCCTTTTCCAGCGATCCTCGGGGGCGACCTCGATCAGCGGTTTTACTTTGAGC
ACTTTGATTGCGATATAGGCTCCAATAGAAGAGCATATGAAGTGGACGCACGACACAGTC
AGAGGGAATTTGAACTCCAGTTTCTGCATCCAGGAAAAAACTTTAAATCGTCGAGAGCAA
GGAGCAGATAATTTCTTTATTGGAAAATGAGGATATTCGTCATTCAGGATCATTTTATTT
TCAGACATGTGAAGGTAGTGTAGGATGTTGTATTATTATTTCTAGTTTAACTCTGAATAA
AGTTTGAAACCTGGCATGTTGGACTGTTGGTTTACCCTCTAGTTTAACTCTGAATGAACT
AGCAATCAAACACATGAACAAAAGAAAGGACTTGAGGTTTTGTTTCTCATCCTAAATGTT
TTTTACTATTGGCAAGGAAACCTGATTCGATAATTCCTTTTGTTTTTACTTTAGTGGCAT
GATAAAATCATTGACTAATCTGCACCTGAAGGCACGGATCAAACATGAGAAAGTGCATAG
GAGGATGAGGAGGAAAAATAAAAGGGGGTGATGGAGAAGAGTTGGGACCTGGAAGATCCA
CTTGTTGATGATGATGACGGTGACGTTGAAGCCCCACCATTGGAGGATGGCGAGCACCGC
CCGGACCGTCGCCACGTTCCCCATCTTCCCCTCCTCCATCGCAAGGAAACAAACGCCTCT
CCTCCACAAGAGATGAAGAAGAAGATGAAGAAGAAGGCCAAGGGAAGAAACCGAAACCGG
CCGGCGTTCCGGAATGAATTGATTAATAATCAATTAATCCATCGAAAACTCCTCTCTGGA
CGACCCGCTCTAGAAGGCATCGCCGGTTCTTCCAGAAGGTTCTAGAAAGATGAGAACTTG
AGGCGGCGCCGTCGATGTCCAGCGAAGAGAAACACGAGAGATCGGAGAGGTGAGAAGAGA
ATAGATACCCAGGGCAGGATTCGTCCCGGTTTTAGGTTGAGAGCTCGGTTTGTGTGAAGG
AGGGCGAGGACGGGAGGCTGTTCCCTGTCATCATGGAAAGCGTTGCGGCTGCCTTCACGT
CATGCTTCTACTACGCGGCCTATCCTGGCCTGGACACGTGTCACGCGAGATAATGACGGG
CGATTGCAAACAAGATTCGTCACTGCAATTAGCAAACCATTTTTAACTCCTAGGATTTGA
TGATCTGCCGCTCCGAATCTCCCTCAAACCATGTTGTAGCACAATGCAATGTGTTTAGAG
GCATGTTTGAATTGATACGTTTCTCACAAGCACCCTCTAAGCACATTGCATTATAATTTA
TACATGGCATTAAAATGTCACAATAATAAATCAGTTTCCGAAAATAGGACTACTAGTATT
AGGTAAAATAACACGAAAGTACAGTGAGTCATAGCCAAACAACAGGGAAAACGGAGAGAT
AGACAAGGGCATCATTAGTTCCTTACAAGAGTTACAATGGAACAACTGGCACTAAGTAAG
TAAAAAAACACAAGAAATCAAGTGATGTTTCGTGCAGATAATAATACAGCCTACATAAAA
GAAGCGTTTCATCAGGCGAGACTTCCATCACACTGTAAGTGTCAAACTACACAACTGACT
GGCTCTGATTCAACTATTCTTCAAGCCAGTGTATACATAACAAAATGACCGGCCCTCCCA
AGAACGAGGGCCAAAGAATGATCATCGTCCCTTCCTTTTTTCCTTTACCTAAACGCTCGG
CCAAGCAAAATCTTGCAAAACGCAATTCTGCTTATTACTCTTCTTGGCCAAGCAATATCA
TCATCAACTAGGCTGCTATGCGTTGTCCGGCTGGCTCGCGCGCTTGGCGCCTATATGTTG
TTGCTTATTCAGGATTGACTTCTCGTACCTCTGCATCCCCTCCCTCGCCCGCCGCACGCT
GCACAGCGGGCAGTACCAGTGGCCCTTTGGGACGCAGGTGCGCTTGGGCGTCATGCAGTA
CACGTGGTAGGCCTCGTCGCACCCGTCGCACAGGGTGATCTCCTCGTCGTCCTTGTTCTT
GAAGCAGCCCCTGCAGAGGCAGGAGGGGCAGTACCAGCACTCCAGGTTCTTCTGCTTCTC
CAGCGCGATCTGGCTCGTCCTCAGGCACCGGATGTGGTAGAACTTGTAGGGGCAGTAAGG
GTGGCCGCATACCAGGAACTGCTTGTCGTCGTCCTCGCACGTGCCGCAGTTCTTGCACAG
CTTCGACAGGGCGGTCGTGTACAGATCCGGCTCGTTCTCTTCCTCCACGCTCGGCACCGA
GCTCCCTTCTCTTTCGTCGACTACCTCGATTCCGCTGGCAACTTCAGGTGGTTCTACCTT
CTTGACGACCTCAAGCTTGTCACACAGAGGACAATCACCATGCAGGCTGTCATGAACGTT
CTTCTTGGTGCCTGCAGCCTTTCCCTTTCCCTTATTGTTGCTGCAGGCAGGGCAGTGCCA
GTTGTCCGGGATTTGTGTCATGGCAGGATGGAGTCGCTTCACACAGTCAAAGTGGTATGT
CGTGTCGCATCCATCACAGATAAGGCTTTTTTCTTCCTCTGCACTGGTTCCACATTGTTT
GCAAGTGCAAGTTCGCCCAAGTCCACATGTCCCAGATCGCTTTGGTATTGTAGAATGACC
GGAATCACATGGGGAGAACTGTGTGGTCGTATTTGAATCCTTCGGGATTTTCTGGACGAA
ACCACCCAAACTAGTTTCCTAATGAAATATACAATCAGTAGAAATTATCAACTGAATGTA
ACAATTTAGAAAGTAGCCAGCAAACTGTGCACAAACAGACTGATTACCTCTATGATCCTG
TGCTCAGCAGCAACCTCTACTTCAGAAACTCCAGAAGCCTGTAAAGATTATATCATAAGC
ATTGCCCAGCACCAGTATAAAGACGAATTATAGCAACAAGTTAAGCATTGACAGCAGCTT
GAGGTACAGTTATGCAGAAATACATGTCTCTTAACTATGGTGGCAAAAACTGCAAACTTA
CTTGCTTCTGATAGGAAGCTCGTGAAATGATTGGAAGATTGCTGGCTAGACTTGTCATCT
CTCGGCCAACTTGTTCAAACTTCTCCCATATCTATATCATGCACAAATATACATACATAT
TAAAGTATTATTTGCCTGAATGTTTCATGAAATACTTATAGCAAGCAAAAGAAAGGGATG
AAAAGTTGAAAAGACCAAAAATAAGAAGAGCAGCACACGTCTTCTCAGAGGGGTAGGAGG
TGGTGCACTAAGGTCTACACAGCTACACCGAATCTAACCATTAGTTGATTTTACCCCAAC
ACATTAAAGTTGTTTTTCGCTATCTGTCCATTTTAGTAACCGAAAGGAGGAAAATAAAAC
TTCCTCACTTGGATTGATGCTCCAGCATTGAGCTGCACATGCAGAAGAATGATTCGACAA
TTTACGTGTGCTCGCAGATGCCATGGTGAAAATACAGGGACCATTTGAGACACTACAGTA
TATAAAAGGCCTGTTCTAGGCTGCCAAGCAGAAGTGATGCTGACGTGTCTCTATTTGAAA
TCATAAAACACAGTAATAATCATAGTTAAAGAAGGCACACTTAGGCTCTAGGCGATAAGA
AAACGACTAGCGCTGAAATACGCTTAATCTGCGCATAAGCATGCGCCTTGGTTATAAAAG
TGCAATGCGATGACAAAACGCACACACAATTAACACCTAGAGCTTTTTTGAACTATTGTA
ATAATCAAGAACGCGGCTACTTTTTCCAATGAATGATTGAGAAGCAGTTACCTGCTGGAT
GTGGTCGTTGAACAGAGCCGGGTTCCGTGCATAGTTTCCATTTCTCATGTTGGTGTCAAT
TTTCCCCAAATCAATGACCTCATGAACCTTACTCACATGGAAAGTTCCAACTAGCAAATC
ACACAACAAGGCAAACTTCTCCGAGACAAAAATGTCAAGGAGAGCATTATTGCACATTGC
TGTGTTGGCATCCAAAGATGCTGCAGTTGCATCTTTTAATGCAATAGAGGAGCTAATCTC
TTTAGCACCTGCTACTCCAGCAGGATGCTCTTCTGACGCTCCTTGGCCTTTATTTAGGTC
ACCCTGGTAATCACAGAGAAATTCAGTATCAGGGGAAATTCCTATCATAGACATTATACA
CTAGGTTGCTTCTTCTATGAGATATATGTTCTGAACAAGAACATCATTACTGACTTTTTG
CACTGATTGACAGCAATTGTATCTGAGCGCATCTTGTATGCAGCTCTGAATCCCCCCACC
CTTATTTACACCTGGGGATTGCAGGAAACCCTCCAACGTGTCCCTCCAAGTAATCCAATG
TCTGGGCAGCATGTGGTGGCCATCTTGCCCGGAACTGCCGCTACAGGGGACGATGGTGGC
ACAAGGCTGCAGACAGAGCAAGCAAAGGAAAAGCAGTGAGCACAGATTTCAGTTATGTAG
AATATCTGCAGAGGAAAAGATATTTCGTCTATTGGGTACAGAATTGCTAGGCAGCGGCAA
GATTCATAGCATTGGAAGAACCTAGTGTGCAAATCTAGGCGCTTCAAAATGAAATCTTGG
CCGGCCGGTGGCACAAAAGAGCAAAGACAGCCAAATATTCCAACTGCAACGGCAAGAAAG
GGGTCTGGGGAAGAAGAAAGAAGACGACCAGGCTAGGGATTGCAATGCTTACCGCTCCGG
GGTCGGAGGTGGCGCCGCAGGCGGCCGTGCGGCGGCGCTTGTAGGTGACGAGGACCTCGG
GCGACGGCTGCTCCCCCGGGGCAGGGCGCTTGGGAGAGGCCAGCGGCGGGGCGGCGGCGT
CCTGGGAGGTCATATTCCGGCACGGCGGCCGCAGCACATGCCCAGCAAAGAGCGCGCACG
TGGCCGGAACCGGGAGCGAAGCCTCGGAGGGGTGAGAGGGAGCGAGTTTCTAGGGTTTCC
GGCGGGGGGTTACGGAGGAGGATTTGGGTTGGGATCTCCCGGTGAGGGGGAGGGGAGGGG
AGGGGAGCAGCAGAGCAAAGCAGAGAGGAGAGGGGAGCGGGACAAGGTGAGAGATGAGTT
TTGGGAAGAGGAAAAACGGAAAAGGGAAAGCCAGACGGACGGACTGTTGGTGTTGGGCCT
TCTATCTGGGAAGGGACGGCTATCTATACTGCCCCCTCCGAGTCAGCTTTGGACATGGGC
AATTCGGCATGGCCTCTCTGATTTGTATCTGCTCCGTTGCCGGTGCGGGCTGCATCCCCT
CGGAGGTGGATGGCAGCGCAGTGGGGCGGAGATCGGAGGTGGCCGGCGGTGGGGCGGAGT
ACAGGTGCGACTGCAGAGGGGCAGGGGGGGACTGGAGGTGGAGGTCCTGGATGGTCGGTG
GAGTGAAGAGGAGCGGGCGGTGGTCGGCGGAGAGGAGTGAGGGCGGAGGAGAAGGAAGAC
CGGCTGTCAATGGAGCAGCCGCGGGGCCGGGCAGGGTCGTCGCGGCGGGAGGCGGCCGGC
GTACGACGGTACGAGTAGTGGTGGAGGAACGGCGGCGACCGGTGGAAGAGACACGGGGCA
GGGTTGCTCGCGATTGAAGAGGGCGGTGGCAGGAAGGACGGCTCCGGCGGCGGCGGCGGC
GGCGGCGGCGGGGGCGCCGGGCGGGG
