Contig Data
morexGenes
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Map Locations of contig_1562016 (9090 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1562016

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11868 3 1776 bp MLOC_11868.1 Available Available LOC_Os03g16900.1, FRAME:+2, EVALUE:0.0, 13103.m02014 protein rab GDP dissociation inhibitor alpha, putative, expressed





CDS Structure of MLOC_11868






Contig Sequence (9090 bp)

>contig_1562016 9090 assembly3_WGSMorex_rbca.fasta
TGAACTATGTAGTATGTGATGAACTATGTTTGTGCAATTTCTCCCACGAAAGTGTTTTTT
TTCAAATTATGCAGGTTTTGATACGCGTTCTGTTCGGCCGCGCATGTTTTCGACCCGCAA
ACGCGATCTTCGTGAAACCGCAAACGTATTTTGCGGGTCGAATTTTTGCGGGGTCTGCTA
CAGTTGCTCTTAGTGGAGGGACAATATCTTGTGCTCAAATTCGTCCCATGCTCCCATTTT
TTAACAATTCAATTTAGACGTTTCCATATTTTTCCAAATGTTTATATGAGATGTTTCCAC
AACCACTAAAAATTTCGGTTACACATTAATAAACAAAAAAAAGAGGATCTTAATTTGTTT
TGGGTTGTAGATATATTTTTGAATTTGTGTTTTTAATTCATATTTTCTCTCAGATATATT
AATATTGTTATAATTGGCCAAAGGATTTTGGATTCTCTATAGTTTAATTGTTTTTAATAT
TTTTAAATTATGAACATTTATCAAAAAATTTAATGTTATAAATTAGGGAAAATTTTCAAA
CTAATGAACATTTTTTAAAGTTCACGGACATATTTAAATCTGTGATGTTATTTGTAATCA
CCGAATGTTGTTTAAAAATTAATAAAACCTTTTAATTCACGATATATTTTGCATATTTTG
AATATTTTAAAAGTAATATTTAATCGACCAAACAAAAAGAAATAAACAGGCATGCCCTCA
TACGCTACTGGCTGCTTGCACTCGCTGGGCCAGGCCTATGTAGGGTAAGGCGGGACTGAC
ACGAGCTTAGAGTTCACTATAAGCGTCACATAAACATGAGAGAGATATTTTTTGCTTATT
GCGGGGTGTATCCTCGTCTCACGCTCGGTGCGCGCTCGCCTTAGTGGATCGGAAATCTTT
GATAGTTTTGAGGGGGCTGTTACGCGTTCACCGGTCCATAAGCTTTTAAATTTGATTTAT
TGAATGGCTGAGCGTTATCTTCCATCATTATAACACATGCCTTGTTGCCAAAATTTCTTG
CAACAGACAAATTATTGCAAGAAATTTTGGAATAGACGTTTTGTTGCAGATTTTTTTTTG
TAACAAACATCCTGTTGCAGATGTATTTTCAACATACATTTTGTTGTAGATTTGTTAATT
TTCTTTTGCAACAGCCGTCTTGTTGTGGATTTATTTTTTTGCAACAAAGTACTTGTTACA
AGATTATATATCTATAAAACGAAGGCGTGTATCATCATATGGCCAAGATTGCAACAACAT
TGTCGCTGTTGAAACATGTGCCTCCGCTTACCTTCGTGTTGAGGATGCATGACGAGCAAC
GAAGGCGGCAAATGCAGCATGATTATCCACCGGCTGAGGGTAATCATTTCCCTAGTTTTA
ATTGGTTTTCTTCAAATTCTTTTGTTTTTTCAATTCTTTTATTTCTTTTTTAAAATATTT
TATTGATCTTATCTAAATATGTGCTTACCATTTTTTGTATATAGGTTGAACCTTATTTAG
ATGCATGTTAAATATTTTCCAAATGCATGTTGAATACTTTTTCAAATATATGTTGCACCT
TTTTTAAATGCACATTGAACATTTCTGAATACATTATTGAACATTTTTAAAAATGTCATC
ACCATTTTTTATAGTGTAAATATATTTTTAGATGTTTATACACATTTACTAAATGTAAAA
AAAACATAAAGGCACAAACCATTGTTTAATACACCGTGAATATTTTGTGGCAAATTTTTA
ATACTTTTCAAAAGTAACATTACATTCTTTTTGAATGTGAACATTTTTTAGGTTGTGAAC
GTTTTTATTATGTTACAAACATGTTTTATAAGTCATGGGCATTTCAAAAAATGATGAACT
TTTCAATTGTCAGAATTTTTTAATATATAACATTTTAAATATATGATTAACGTTTTTCAT
AAACGAAAGAAAGTAAGTTTTTGGAATATAAATATAAGGGAGATTTAAAAATTAGTAACA
AAATGTAGAAGATTTGTATAAACATGGCCTATAGAAAAGTTAGAAGCTAGCAATCGCCAC
ACAATTTATTGCTTCTCACTAGTTAGGCTTTCTTTTACAACTATCTCCTCCTTTATTCAT
TAATCAAAATAATGGCATTGCTTGCAAGAAAGGGAATAATCGCACTAGGTACGGTATCAA
TCCAACAACCAAGATGAGAAAACTTAGCTAACCTAGGTAATTCGTGAGCTACTTTTTGCT
CTCTGCTACAATGTTCATAAATACCATGATTAAAATCTAATGATATGAAATAACAATCAC
CGAATATAGCACTAGGAACTGAAGAACAGTTGCCTTCCTTTAGAGCTTCAACCACCTCTA
CATTGTCAGAGTTGATTTCACTCTTGCTACATGCAACAGTACGGGCTAGATTTATTTCAA
ATCTAACTGCAATTGATTCTGTTGTAAATGAATCAAAGCATATATCTTTTTTTTTTTTGC
ATCAGCAATGAACGTGCCGTTGTGTTCATGAAGGACTGCTCCCACCGTTCCTTCAAGTTT
ATCCAGATCAAATCCAGCATCTACATTCAGTTTAGTATATGCGTACCTTGGTCTGCTCCA
CCCGGCTACCTTATGTTTGGCTTTGGGCTTACAAGAGATAATGTAGTTCACCGTCAGTCC
TCTCATGGCCAAACTGATTTGAGCTGCTGTTTGTGTGGTCTGTCCATGAGTTTATTTTCG
CCGTTCATATCACAAGTGCCATGCTGCAGTGGCTACTGTTTGTCTGTTTCTCTTGAATTA
GGGAGGCTCGGGATATGAATCTCATGATCTTGCAAACACATCAAGTGTTCAAGTATCACT
TCTTCAGCGAAATCATTAATTAAGGAGTATACGTTTTAAAAATCACTTTCACTTTTTTAG
GTTGCGACAAGATGTGCATTGCATGTGTGTTATTTGTGGCAAGTTGAAAGTTTTTTTTAG
ATACGTATTTTTAAAACGTTTTATCTTCTAAACCGTGCGTCCAAATCTTGAACCGTTTCT
ATCCTTGGGTTTTTCGCGTTGAGATCTTCAAAACTAGATCCATGTTGATAGATTTGACCA
ACTTTTTTCACGAAAAAACTGAACAAAAAAACTATGCCTCTCGCGATAGAAAAAAACATA
AAACGCGTTTTTTTGCTTTTTTTTATTCCGAGAGACACGACCGTGCCTTTCACGAAGATA
AAGCCGTGCCTCTCATGAAAAAAAATGCATTTTTTCCTTTCCAAGAGGCAAATAATACCT
CTCGCGGAAAAAAAATAGGGAACATATTTTTTCCTTTCCAAGAGCCTCTCACAAAGGCAA
AACCATACATCTCGTAAAAAACAAAAAACGTACTTTTTCTTTTCCGAGAATCACAACCAT
ACCTCTCGTGAAGACAAAACCGTATCTCTCGTGAAAAAAAAAACAAAAAATGCGTTTTTT
TCTTTTCGAGAGTCATGGCCATTCCTCTCGTAGAAAAAAGGAAACATGTTTTTTATTTAT
TTTTGAAAGATAGAATCGTACCTCTCGCGAAAGTAAAACCGCACTTGTCGTAAAAAACAA
AAAACATGTTTTTTGCACAATTTTTTTAAAATAAATTCGTTAAAAAGCTAATAAAGACCG
ATGAAATCCGAAATATAAAAAACCCCAAAAAAAATCTAAAAACCAAAAACACGTGTGTAA
TTTTTTATATTAAAAAATCCATAAAAAAATCAAAACACGACACGTGACGACAGCTAAAAA
TATGTTAAATGACGACACGACCGTGTCTTTCACGAAGGTAAAACCGTGCCTCTCATGAAA
AAACACATTTTTTCGTTTCCAAGAGGCAAATAATACATCTCGTGGAAAAAAAATAGGGAA
CATATTTTTTCCTTTCCAAGAGCCTCTCACGAAGGCAAAACTGTACATGTCGTAAAAAAC
GTGTTTTTCCTTTCCGAGAATGACGACCATGCCTCTCGTGAAGACAAAACCGTGTCTCTC
GTGAAAAAAAAACAGAAAATGTGTTTTTTTTCGAGAGTCATGGCCGTTCCTTTCATAGAA
AAAAGGAAACACATTTTTTTTATTTTCAAGAGAATCGTGCCTCTCGCGAAAGTAAAACCG
TATCTGTCGCGAAAAAACTGAAAACATGTTTTTTTGCACAATTTTTTTAAAATAAATTCG
TTAAAAATCTAAGAAAGACTGATGAAATGCGAAACATAAAAAGCCCAGAAAAAACAATCT
AAAAAACCAAAAACAAGTGTGTAAATTTAAAAAAAATCCTAAAAAGAAATTCAGAATGTG
ACACGTGACGACAGCTATAAACATGCTAAATGACGACACATAAAAGTACTCGTTGAAAGG
CTTTTCAAAGAACACTCGCTGACGCTGAGTAGTTGTTCTGTTGTCTAGTCGGTTTCCCTC
GCTACAAGCGAGACAAACACACGCCCACGCACCGCAGCGCTGGGCCCCGATCGAGGTAGG
CCTTCGGCGTACAATCCGGTGGCCCACGCCACCTCGCGAGAGAACTTGCCTCAAAAAAGA
AAAACCTTGCGAGAGAACGGGGGAGAGCACGGGCGCACGGTGCGCCACGCGTCGCGCTGG
CCGGGCGCTGCGACCTGCAATCGCGCGCCTCGACGACATCTCCGCGGGGAGCAGCAGCGC
CTGTGCGTACGCGCGCGCTTGTCGGGCTCCTCCATATATACGCACGACGAGCCGAGAAGG
GGACAGACAACCTGCGAAGGGTGGAGGAGGATCCGGCAGATCGGAGAGGAAGAAGGGTTT
GTCCGGGAGCGATGGATGAGGAGTACGACGTGATCGTGCTGGGGACGGGGCTCAAGGAGT
GCATCCTCAGCGGCATCCTCTCCGTCGATGGCCTCAAGGTGAGCACTGAGCCGCCGCCCG
TCGCTCGATTCCCTTCTGATTTTGCGTACCATCACTTGGAAATGTTGCTGGATACATCAT
CATCACCAATTAATTGTCCACGAAGGGCATATGCATTACTATCTTAAGCTATCATTTCTC
TTTTGGCAAAGGTACGATGCATAACTCTGAAGCCATTCTTTTTTTCCTTCCACCTTGTGT
GCGTACGAGACAGGTTCTTCACATGGACAGGAATGACTACTACGGTGGAGAATCCACATC
CCTGAATCTGGCCAAGGTGCGCTAACGTGACCCTTGCAAACACCATGCATCTTCACAACA
AATGTTCTCAAAAAATCACAAAAGATCTTGAAATTCTCGTGAATCTTCAGTTATCTTGTC
TTACGTTTCGTTCCGTTCGCTTGATAGATCTGGAAGAGATTCAAAGGCAGTGACACCACT
CCTGACCATCTGGGTGTCAGCAAGGAGTACAATGTCGACATGGTGCCCAAGGTCTGTAGG
AGCCTGTAAACTCAGTTCCTTTGTCTTTCCTGTGTTTCTGCTGTTATGCAGATCACCGCA
AAATGTGAGTTTGCAGTTCATGATGGCCAACGGTGCATTGGTCCGTGTTTTGATCCGCAC
AAGCGTCACAAAGTATCTCAACTTCAAGGCTGTCGATGGCAGCTTCGTGTACAACAACGG
GAAGGTATGGGTCTGATATTCAACGTCATACTGCCATTAAAGATTATTTGATATTGGTAA
AAAAAAATGTAACATGGTGTTCTGATTCACATTTCTTTCTTTGGTAATGCTGATAGATCC
ACAAAGTCCCTGCGACAGATGTCGAAGCCTTGAAATCTAACCTAATGGGCCTTTTTGAAA
AGCGCCGCGCTAGGAAGTTCTTCATTTACGTTCAGGACTACGAAGAGGATGACCCAAAGT
CACACGAAGGCCTGAATCTGCACAAAGTCACGACCAGGGAACTCATCTCGTAAGTTGCTT
TGGCTTGTGTTTTTTTCGGGTTGCTGCGCAGCGAACAAAAAGTCGAAAACCAAGTTGAAT
TTCGCCACCATTTCCTAATGCAAAGTCGATGATGTTTGCTTGGATCAGCAAATATGGACT
GGAGGACGACACAGTTGACTTTATTGGTCATGCATTGGCACTTCACCGGGATGACAACTA
TCTGGATGAGCCTGCAATTGACACTGTCAAGAGAATGAAGGTACTATATTTCCACCAACT
AAACAAAACAAGTCTGTTGGAGTCAGCATACATTTTGATTAGCATCGCACAATCATGCCT
TGCTGAATTCTTTATGCATCTGGGAAGTTGTTTAAGATCGCGAGCCAGCTAGTTATTGCT
TTAAAAAGAGAAGATCCTTAGGCGTATTATCGGAAGATAGGTTACAGAAAGGACATATAC
TCCACATCTTTTTCCTCAAACATGTACTGTAAGAGCACAGTTTTCAGCTAAATATATACA
ATGGGTGAAACAAAAACATGAAGCCATGACAGATAGTTTAACAATAAATACATTGGGGTT
TGCGGAGGAAAAGACAATTAATCTCCACATTGGTCTTCTTTCAATAGCTTTATGCGGAAT
CATTGGCACGCTTCCAAGGTGGATCACCTTACATCTACCCCTTGTATGGGCTAGGAGAGC
TCCCTCAGGTATGGCCGTGCCAATTTACTTGGAATTGATACACGTTTCAGCTTTGTTCAA
CTGAAATTGAGGATTATTTATTAGGCCTTTGCTCGTCTGAGCGCTGTTTATGGTGGCACA
TACATGCTCAACAAACCAGAATGCAAGGTAACTGTTTTATTCATTTTCAGACAGTTCACC
ACTCAACAATGCTGCAATGCTAGTTTCTAAATCTTCAGTCAAAGATGCTTATATTTGGAA
TTGTTTTCAGGTTGAGTTTGATGAGAGTGGTAAAGCATTTGGTGTGACTTCCGAAGGGGA
GACCGCGAAATGCAAGAAGGTTGTTTGTGACCCCTCGTACTTGCCTGACAAGGTATATAT
ACATCTGTGGCTCGGAATTTCATATTCAGGCTTGTGGTAGTATATGACCTTGAAATTATT
CAAACAATGTACAGGTGAAGAAGGTTGGAAGGGTGGCGCGTGCCATATGCATAATGAAGC
ACCCCATTCCTGACACCAAAGATTCTCACTCAGTGCAGATTATCCTCCCAAAGAAACAGC
TGAAGCGCAAATCAGACATGTAAGTAATATTAAAATGAAAGCAAACCTTCGAAAATTTAG
ACAATCCTAATTAGATAAGGTGTACTGTTCTTCAGTTGGTTCTCGTTGTTATGATTACTT
TAAAATATGAGCTGCCTTGCTTAGGTAAAGCACAATAGCAGTACCTGACTGACACAATTA
TTTTGCAGGTACGTGTTCTGTTGCTCGTACGCTCACAACGTTGCACCGAAAGGCAAGTTC
ATTGCCTTTGTGTCGACTGAAGCTGAGACCGACAAGCCTGAGATCGAGCTGAAGCCCGGG
ATCGACCTGCTCGGCCCTGTGGAGGAGACATTCTTCGACATCTATGATCGATACGAACCT
GCTAATGCTCCGGCGGAGGACAACTGTTTCGTGACAACTGTAAGTTGAAGCAGCCATAGT
TTCTTCTCTTGACTACACCACAGGACCCGTTCTTATGTAGTTGGTTTTTACAGAGCTACG
ACTCCACCACCCATTTTGAGACAACGGTGAAGGATGTGCTCGCCTTGTACAGCAAGATCA
CTGGAAAGGTAATTGTGCTAGATTTGTTTTTTCAGTACTGAATAATAGACGATTATTAAA
AGACTAAAGGAAGATCTGGCTGGAAATTCAACAATTTGCACGATTACAATGCAGGAACTT
GATCTTTCTGTGGACCTGAATGCTGCCAGTGCCGGCGAAAATGATGCCGCTTGAACATCT
GTTACTACTAGTAGATACTTTCATTTTTCTTTCTTTTTTTCTTCCTTTTTTTTCTTTATT
CATCAATTCGTCCATAGATGGATCTGTCCCGTTCGATCCATTTCTTGCTTATGGGCTTCC
ATTTGTCATTTTTTGATACAAAGTACTGTACCATGGATTTATATTATATATATACATCGA
ATAATCTCCTCATGTCTTCAATAGCGTGAGCATTGGAGTGAAAATTGCATTGTTCATCTA
TGCTCGTTCTGAACAAATCTCTTGTGTTACTACTACCACTGTTAATTGAACTGTAAAAAC
ATAGCATCTTATATTTAGTTACGGAGGTAGTAGTACCGAACATCTCAGGAGGACCAGTAA
AATGAGAATTCGCGGTGACCCCAGGATAAGGGGAAGGAGGACACGACTCTCGAATGTATA
TAAAATGTGGTTCGAGATTTGGACAGAGAGAATAGATATTCCAGTGTCCATCTATCTATT
GTCCTGATGACAGTAGGATAAATTAAGTGCACGTTGTTGCCGGCCTTTCACGCTTCCAAC
CTTTTCCTTGAGCGGAGCCAAAAATAATTCAGAATAGTGCACACACGACAGAGGAAAACG
AAGAGCAGATTGGGTTTTCAAATAATTCAGGCCTGTGGTTGGTGGCCCTGATAATAATTC
CCCATGTTACCCGTAGTGGTTAACTAAAACTTGCCTAATTAGTTCTTCCTAACTGCAAGT
ATTTAGATACAGAGGGAGTAGATGATTTTATCCAGGCTAGACAGAAAACGGTGTGGGCTC
CATCATAGATTGAAGGAAAAGGATCAAAGGTTCAAAGGCTAACGGCCTGTATCATGGTGC
TAGAAACAGTACAGCACCGTCATGGACCAAATCATTTCATTTACCATCCTCACTGGACTG
GAGTACCATCTTGAAATGACACCCATTCCGTATCATGGTGGACATCTTTTTCGTCGGATT
GTCTCAAAAGAAAAATCCTTTTCGTTGGAACCAATCTGTTAGGGTCAGAAAAGTGGCGGC
AAAAGAAAATGCTGCCTCTTTTGTAGGTTTGGTGAAAAGTAGTGCTTTTAAGAAATGTGA
ACAGATTTCTCAAAAATAATAATTGTAAACAGGCTAGTACTAGTGTTGATTATTGTTAGC
AGGCACACCAAACAAGGAGTTGAATTGGGTAGGAGCAGTACTGAACTATTGTATTGTGTA
CGAGCAGCAAGGAGTTGAATTATTACTAAATGCAATTTCTTAAGTCTAGCCATCTGTTGA
AATTGATAGTGGGCTTTAGGCCCATTAGAGAATTTCAGGAAAATCTCCAAGGCCCCATGT
AGGTGGTGGCATGACAAGGTGGTGGGAAGT