| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1561867
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_11805 |
1 |
1642 bp |
MLOC_11805.1 |
Available |
Available |
LOC_Os10g37530.1, FRAME:+3, EVALUE:2e-77, 13110.m03406 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| MLOC_11806 |
2 |
1971 bp |
MLOC_11806.1 |
Available |
Available |
LOC_Os10g37520.1, FRAME:+2, EVALUE:0.0, 13110.m03404 protein major facilitator superfamily domain-containing protein 5, putative, expressed |
CDS Structure of MLOC_11805
CDS Structure of MLOC_11806
Contig Sequence (6478 bp)
>contig_1561867 6478 assembly3_WGSMorex_rbca.fasta
ATAACAAATCCAATTTCGAAGGGACTTCCTCCCCATGTTGAGAAAACTTTTCTTCTTCCA
ATTTATCTTTTCTTCATTCAATTCAGTTCAAAAAAGATACCTCAAAATACTTCAATTGGT
ACGCGCAAGAAATAGGCCAATTCGGCAGCTCATTTCCTCCGACCCCCGCGTCTGCCGCCG
ACCACACACCAAACCCTAACCCTACCACCGCCGCCGCCATGGCCGACCCACGGGTGTTCC
CATCGGGATCAAACGGCCCGGAAGACCACGCCCCCGGCCGCCGGAAGTACAACCCCTACC
AGGACCTCAACATGCCCTACAACTACAAGAACCTCTACGACCTCCCCACCTCGCCGGAGT
TCCTCTTCGAGGAGGAGTCCGCGGTGCAGCGCCGATCCTGGGGCGAGAACCTCACGTACT
ACACGGGCATCGGGTACCTCTCTGGCGCCGTGGGTGGCGCCGCCCTCGGCCTCCGCGACG
CCGCCGCCGGCGCGGAGCCCGGGGAGACCGCCAAGATCCGCGCCAACCGCTTGCTCAACG
CCTGCGGCAGCTCCGGCCGACGTTACGGCAACAGGCTCGGGGTCATTGGGCTGATGTACG
CCGGGATGGAGAGCGGCATGGTCGCGGCGCGCGACCAAGACGACTGGATCAATAGCGTCG
CCGCCGGGCTCGGCACCGGCGCACTCTTCCGCGCCGCTAACGGTCCACGGTCTGCCGCCG
TCGCGGGCGCCGTCGGCGGGGTCCTTGCTGCCGCCGCCTTGGCCGGGAAGCAGTTTGCGA
AGCGATACGTGCAGGCGATATGAATCTCTCCTGTTCACTCAGATCAATTGATCAGATCAG
TCAGTCGCCAGTAATGAATTTTTGTTTGTTCTCCAGCTTCTCTGCTCCACTAGAGAATGC
ATAATATTTATGCTATGTTAGTCGCATTTACACAATCAGAATGCCGAATTTTGGCTTTGT
TGCAACGTAATAGCAGGTGGGATGCCAGCATAACCCTCTGATCCAAAATAAGTGTCGTGG
TCTTGAACTAACCCAGTTTAAAGCTGGGACGCTTATTATTGTTCGGAGGTGGTACATTTT
TCGGGTGTTGCTGAGCAGTAAGAGTTGATCCGAGATTTTGCAACGATTACAGTTGTGAAA
CATGGTACAGTATTTGGTAACAATGTTATTTAGTTTGATGAGGATAAGAGTGCATTGTGG
ATTGATCAGGTTTTCATGGCTGTGCCGTGTGTTCACTTGCCTGTCTTCTAATGTTGTTGT
GGGGGTTCAGAATTTTGTGAATTTGTTCTGAGTTTAATGGATTGTAGCTATGTCCGTTGT
GGGGGTTCAGAATTTTGTGAATTTGTTCTGAGTCTAATGGATTGTAGCTATGTCCACCAT
GGACACCTATGTTTTTCGGTGACTCATGTTGAGAGCCTGACGAAAAGCATTGTGTTTTGA
GCTACCCCAGCTGATCATTTCGAAGATCCCAGCGCTGCATTTGACCCTAAAAGTCCTGTG
GTCTTGTGATGAAAACGTTGACACTTAATTCTGCTCCTGCCCCGATTTGAGCTGTCTTAG
TTCCCCGGTTTGAGCTGTCTTGTTATACATAAAGAAATGGTTACGGGGCTAGTAACAATA
ACATGATAATAATGGACAGCCCGCTAAAAAATGGATCCGGCGAGTTCCAAATTTGCACTT
CTGGTTTACAGGATTCTTAAAACACAGAATAAGGAAAGTATGGGATTCATCTGTCATGCA
TGTTGAAATCCTACATGAACTGAAACACATAATGTGTTGTCAAAATTGTTAGGTGTCGTC
GCAGGAAAAAACACAGGGATTTTCATGTCAAAGCAAATCTCTATGAGGTTGCCCCAGTGG
CAATTTTCCTTCAAAATTGCATACAAAGTAGACAATAGGATAATCCAGCTAGTTCATAAT
CCTACAAGGCAAACAAGCATCAGAGAAAAAATTATAATGAATAGATCCTCTGAAATTCCT
ATGCAATCCTTTGAACCAAAGAAGCCGGCCTCAATGATTCACAGGATTACTGAAACACAG
GATTGAGGTGACACCATGCCATCTTGAATACTACTTTCTCTGTTCCATAATATAAGATAT
TATTATATTTGAGAATCCTCCCACAATCCTTTTAAAATCCTTCAAATCAAAGAGACCCTG
CTTACAACTTTGGATTTAAAATCCTAGAGAACAGTTGATATTTGACTGTTGTTTTGCCCC
CTTTGATGTAATGTACCATTCAATAGTAGAGTTGTGGTTGCCTATTCAAATATGTAAGCT
ACTTCAGCAAAATTGCTGCATAATTGTACAATCATCGGATTTGATTCAGAAAGCTTTAAT
GGAGTTTGATTCAAAATGTTCTACTCCCACCGTTCACTATTATAAGCTGTTCTAACTTTT
CCCTGAATCAGACGTATATAGACAGATTTTGGTTTGTTTGTGCACTCATTTCAGTTCATA
TTTTGGTTTGTTTGTTCACCCATTTCAGTTCATATGTACTCCCTCCGTTTCTAAATATAA
GACCTTTTAAAAATTTTATTATAAACTACTATATATGGATGTATGTAGTCATATTTTAGG
GTGTAGATTCACTCATTTTGTTCATCTAGTCTATAGTAAAATATCTAAAAGATCTTATAT
TTTGAGACGGAGGGAGTAGTCCATATTGAAATATCCAAAACATCTAATCATAGTGAACAC
AGGGAGTAATTGTAAAATATATGCTAATCAACACACTTTTTGGAGGCAATCACTAAAACG
GCAGAAATTCCTCTGCCTAGGAGAATCCTCACTGGCACCAGGAATAGGGGATACAGGGGC
ACATGCTGTAGGTTTCATCAAGAGGTTGGATTTAAATACAAGTAGGATCATCCTATTAGC
AAATGCAAGAATACGAGGGAAAATACAGATCTGGTACTATGCCAAAGCTCTACTGTGCAG
TGTATATATCTCAATACATGCCGAGCCGTGTCCTCTCTCCTGACAAAACTGAATACCGTG
AGCGCACCTAACAAAGCAAACTAAACTGGGTTCACGTCTTATTCAGCAGCCCTGCAGACA
AGCAGATGAAGTTGGAGACTGTTCCATGCCCGGTTCACGTCAATGGCCGCTGGTGTGTTT
TAAGGGTTTAGTGGCTCATCTTCTGCTGTCATCTCTGTGGCCTCTGCAGGAATTTGATCT
TGTGGTTAGCAATTCATTAAGTATGCATCTAATTCCAAGACAGAAAATGGCATTTGCTTG
CATCAAAAAATAAATGAATGAAGACAACATACTAGTTGCTCTGTGAAGGTCGGACACAAA
CATCAGCCGCCTCTGCAAAATTGCCGCGATGAAGAGGAAAATAGAACACATGCCGAACAT
GACAGCGATTGGGAAGGCATTCACCTGCAAAATAATATTCATAGGAAGAGCATTATTCGG
ATGAGTAATGATACTTTGGCTTGTTTTAGTACAGTAGAATCTATCTTTATTCAGGTACTT
GTTCAAAACAAAGTTCATTTTTGTTTTGTTTTGTTATTGCAGTACATTAACAAAAAGGAA
AGCTACACTTGGAATTGAGAAGGCTTTGCTGCTTACATTGTAAAGCACCACACATACAAA
CAGGTTAAGTGGTATGCGGAAGAAATTCATGATAGTGCTTCTCGCCTCCTCGGGGATATA
TTGAGATCTCATTTTCATGATTGATGGCCAGAATATGCCAACACATGACTCAAATATGCA
GAAACCAAGAAGCTGTAGACAGCCTCCAAATGAGATGGAGCTACCTTTCTCCGCGGGAGG
TACTATGAACTGTTGAACAGAAATAGATGATTGTAATATTTAGATTGTGCGTATAAGACA
AAAACAAAGGAAACAATCAAAGTGGTCATGTGTAGCAGACTTACATTGGTAACAACAGGG
AGGAAAAGAGTGAAAGCTGATATCAAGAACACAATCTGCATATAACCTTCGACCTTCATC
TTCCGAGCTAAGAGACGAGATGCAATTGAGCTACCCAACATCGAGGAGAGCATGAATGTG
GCAAATATGAAGCCATGAGGAATGTCTTCATCATTTGGGCTCAAAGCAGGAGTCCACAAG
AAAACAAAAGTGTACATTGAACCCTCAAACAGTGACTGTATGGCTCCGAGCAATGCAATC
TTTTCATCTGAAATATTATGAGAATTCCATTAATCATCAACATTAAGTCCAAGACAATTA
TTATGTCCTTTCTTATGCCACGATAGGCTAAACTTACCAGAAGCAATGGCTTTAGCTGCA
ACCTTGAACTGGGCCATCAAGTCCTTTCCTTCAGATGCATCTCCATAGTTCTCACCCCAC
GACGATAAGATGATTGCCATGCCTATTGCTAGGAAGCAAGCAGCAGCATCAAATGGAGCA
ACAGGGCCAAAACCCAAGTTATCAGCCAGTAGATTTGCAAATAGCCCTGCGACAATGGCA
ACTAGGCCATTCCCAAGAAATATAGCCTTGGAGAATGTTATCGACAGCCACTGAGGATCA
AAACCTCTCTGCACAATCACAAGGTAGATTTGCACACTGTCAGTCAAAAAATCAAGGGTG
TCTTACAAGAGGGAAGTCCCCAAACACATTGAAAAAATTGCGCAGTAAGTTAATCACAAA
AGGTACAGTGTTTAAGAAAAAATACAACAGCGGATTGTACTAAAGAGGAGACAACAGAGT
ACTCACGATACTTGTACACATCAATTAGTTTCTAGAACGAATGGCAAATTCTCAGAAGGT
TTAACCTGAAAAACTGCTATTTAACATTGCCATGGTTCTCATTCCTGGTGACTCCTGACC
ATGTGGGAATAGTGGAACACTAGATCTACGCACACAAGGACTAAAACTCAAATAAACATA
TACAAAGAAACCTGGACTGCTGACAGGATGTGTGCAAGAGAGTTAACCGCTGATAAGAGT
TCAACAATCAGACCTCAGATACTAGGGCAGTTAGTAGTATGTTTAGCTGTGCATTGTATT
TCAGTGTATCATTACAAGTGCGTTCTCATACATCTTCGATGCAGAGGGCAGGTTCATGAA
GCTTCCATTTTCCAAAAACAAGCATCACTATAAATGTGTTCTTACACATATATTTTCAGT
TTTATATACCTTGAAGTCATTTTATATACAAGTTGCCGTGTACAGCAGTCAACTCTCCCT
GGTCCATTAATATGACCGACACAAATACCAAAATAAGCATTATAATCAAAAGCAACGGTT
AAGGGGAATGGAAGGACCATTTTTCAGAATAAAGCTGAAGCAGAAGTATACAACGGACTG
AATAAGCACACAGATCTGGGCGAGCTGCTACCTTGTTGTGCTCTGCGACGAGCCACGACT
CGAATGCCGAGAAGAGCAGCGATGTTGCAATGCCTCCAAGCACGCGGCCAATCATCAGAA
TCCTGTACTGCGGGGAGTGCTTCGTGATGCAGCTGAGGATGTAGGTAATGCAGTAGGTGA
TGCACGCCCTCTTCCTTCCCCTGCGAAGGACGACCCAAACCCTCGTCAGCCACCGGGGAA
TACCGACGAAATTTTTTACGCAACCCCGCCAAGGAAGGGATGGAGGAGCACGCACTGCTT
GTCGGCGAGCGACCCGACGATGGTGCCGAAGAGCATGGAGGAGCCGAAGCCGGCGATGAA
GAGGCGGCCGATGTCGCCCTTGTCGAACCCGTACTGGCTGTAGAGGTAGTACACGTAGGG
CCCCTGCAGCCAGTCCCCGGCTGCGCCACCGCCACCAGCGCATGATTCAGACGTCAGAAA
ATCGAGAGAAGACGCAGCATTGCGCCGCCCGAGTTCAGATCTGGGCGAAATTGAGGGAGA
GGTGAGGGGTCGGGCGCGTGCGTACACATCATGAGGGAGTAGACGAGGACGTAGTTGTTC
TTGAAGGAGTTGAAGGCCGTCGGGGTGGCGACGCGGTCCTTGCCGGACTTGCCGAGCTCC
AGCGCCGCCACGACGGCGGCGAGGCCGCCGAAGACGAGGTAGTAGAACACCTCCATGGCG
GGGCCTGCCGAGGAGCGGAGGGGATCGCGATTCGGGGGGTGGCGAGTGCGATTGGGGTCG
GTTTGTTATAGGGGAATGGATTTTATACGCGCAGCGGCGGGCGTGCCATCTGCGTCGGCG
TTAGATTTCGGGGCAGGGGACACTGAGGCTGCGCGTGCCCGACGTTTGGTTGGGTCGCAC
TCGCTCGGCGGTTCTTTCTTTTATTAGTCCAAACACGCCCAAGTTTGTTAATTAAGCACA
ATGTTTAAAGAATTAGTCTGATAAAGAATTACTCCCACCGTCACAGTATATTGGGCGTAT
CTCACAGGACTCTCGGATCTAGATGTTTTTTTATTGATAGCAAAAACTGAAAGGGCCCAT
GCGTTGCAACGGGAGAAAGAAATACCACACTGCACACGCTCTTAATTTATAAAAAATNNC
TATAATTTGAGAATTTATAGTTACGATACAAATAAAGATGGTCTTATCCTACAAAAAT
