| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_1561786
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_11766 |
1 |
1072 bp |
MLOC_11766.1 |
Available |
Available |
LOC_Os11g03780.2, FRAME:-1, EVALUE:3e-140, 13111.m00322 protein alpha-N-arabinofuranosidase, putative, expressed |
| MLOC_11765 |
1 |
699 bp |
MLOC_11765.1 |
Available |
Available |
LOC_Os12g03530.1, FRAME:-1, EVALUE:2e-118, 13112.m00314 protein alpha-N-arabinofuranosidase, putative, expressed |
CDS Structure of MLOC_11766
CDS Structure of MLOC_11765
Contig Sequence (9778 bp)
>contig_1561786 9778 assembly3_WGSMorex_rbca.fasta
GGTAGCGAGGAGCCGTGATATCAGGTTGAACGAGCTCAGTGGAAGCCACACTGCTTTTTC
GCGTAGATGGTGGGGTAGCTTTGTGGGCAGTATCGAATGAAGGATCTTCGTGCTGCTGAC
AAGCTCGCTGACCAGCGCACCACCGTCGGGTGTGTCCCACTCCTTCTTCATGTTGTTGTT
AGCCAAATTAACATTAGTTAGCAACACATATGACACATGATCAAAGATAATAACGGTGTA
TGCTCACTGAACACAGCTTACAATGATCACTAAGTAAGTACTAACACATGATGAGTGCTT
TGATCAGTGGTTACAGGTATCAGTGGTCACATGATTAGTGCTAACATTGATCACATGAAG
CCACAACTCACATGTCCTACTTCCACCAACTATTTTTGGCATTTAGGCATGTCCTACTTG
CATGCCACATGCACTCACGTACCCTAGCAACAAGAGCAACATAAGAACATCAGCAACAAG
AGTAGAATCAACAGCAGCAGCAAGAAGAGTGTCATGAACAAACAGCAGTAAGAACTAACA
ACAGTATCATATACATAGTAATAGCACCAAAACAAACAATGTTGCACTACAAACTAACAA
TATGGCAGTAAGAACAGATGCAAACCACCACTACATTATGAACAATCTAGGCATGTGGGA
TGAACAAAGTAAGCATGCACTCTTGTTCATCGCCAAAACAGTGGATTCTCATCGAATCCG
ATCGAATCTAGTAGAATCCAATCGAATTGGATCTAATCGGATCGAATCGGGTCAAATGTA
CGGGCCACAATCTAATCTAACACACTATGAACTACCCTAAGAACCCTAACTAAGAACCAG
AGGGGGATATGAGAGCTTACAGCGGGGTTGTCGATGTAGCGTACGGCGGTCGTGGTCAAA
ACCCCGGTGGGAAGAGGGGTGTTGGCGCCGCCGATGAAGAGGACCCGGCCATTCCGACAG
TCGCGTCCATGGACCTCGTCCTGCGCCGGCTCGAAGATGACGTTGGCGTCCTGGAGCTCC
CCTCCCCTTGCGTCGGACGCAGAGGAGAAAATCCTCATACGGGGTAAAAATACCGCCATA
AGAGGGGCCTACAAAGGACGGTGCCGGCGAGTATTGGATCCCCGCGATGTTCGAGCCGAT
GGGGAGGACCACCGGCTACGGTGGCGGAGCCGGAGCGACCGACGTCGGCGCTACATTGGC
CCGGGGCGGCGACATGGTGCAGAAAGGGGAGGGAGCTCGCAGTGCCGACGCCAGATCTAC
TACGGCCGCGGAGAGGCCGGCAACCCGCCTCTTTTGGAGGGATTGTTGTCGATGATGACC
GGAGTGTGTGGGGCGTGGCGAGACGGCGGCATGGCCATCAGAGAAACCAAACAGGCGATG
AGGTGAGAGAGAGGGAGTGGGTGTGAACTAACGAGGGAGATGACGGGAGAGGGCATGGGG
AGTTATGAGCAGTCGCCTCGTCTCCCACGCATCCCAAGGCATGCAGGCGCTCGCTACGCG
TGGCTCGAGCGAGCCAGACTCGCCAAAAACGACCGATTCAACCGTTCCTCAAGAGCTAGG
GCCAAGCCTGCTTTGAGGTTCGTACGGACCATGAATTAGATGCGACCCAGGCAACCAAAC
GGGTCATATTCTTTCTGCGCGGGCCTGGGCCGACCTAATGCGAGGAAACAAATACGCCCT
ACAGTTCTGACAAGTGAACTGCAACAGTGAAAGTAAATAACGCTTCAGTAATAGCGGAGT
GTAGCGAGCCATTGGATATCTTCAATGCCTTGAATCCTGTTCGTCCGTTAACTGAAGAAG
ATCGACATCTGATACTGAATACGTGGGTCTGACACATAGGTGATCGACAATATTTCTCAG
CACACTTACACATTCTACTGTTTGGGACGAGAGTCCTAAGCATCCAGTTGGCCCACACAC
AACCCTTTGAAAGCTCAAGCCTAGGAACTATGATGGTTGACATCTTGGTTCCCAGAAAAT
AGCGACAATCACTAGTGATCTAAACTTCTAGAGCTAGATCGAATGAAGTTAAGGAGTAAG
GAGCCAGCAACGCCTGCATCTCCTCCGCAGCATTGGGCAGCTCGCTCATGACCGGCGCCA
CCTGCACCCGTTTGCAAGATACAATTTTCATCCGAGAACCCATAGGGATACAGAAATTGT
AACTAATTGAAAAGTTCGCGTGACTGAACGAGCTTGCAAATAGTTCAGCCGCCATTTTAC
CTTCTTTGGTTGACTGAACGAGTTCCCATCAAACGGATTGCTGGACGTGAGAACAGTGAC
CACGGATCTTGCGCTGTTGACACTAGCTTCAAGTCCAGACACAGATATTGTGAGATTCAC
AGCAACTGGCCCAAAGTTCACTATCTGTGGAACAATTTTCGAAGGTCAATATCATAACTT
GTCAATCCCAAAGTACCTAGGAAACCAAACATGTAGGGTTTTATTTATGCAAATGGTTTT
GAGATAGTTGTTTTGCCATATATGGACATCTCAGATATGAATGCAAGTCTACACTCTTCA
TCAAATCATAACAAACATACGCATGCAGGCTAGTTGGAAAATGCCAGCGTTGATTTTACC
TTCACTCTCAGGAAGCTAATCTTACTGTCTTGCCAGGTGATTGCGGAAGCTGCCAATTGT
TGAGAATAGCTAGAGTTGATTGTGATGGGATGAATCAGAGCACCACTTGATTCACGGAAA
AATGTCTGCATCCAGTAGCTAGGAGTGCCATACTGTTGCCAGGAGTTAAAGACTATCGCA
TCTGGCATCCAGCTGCAATTAAATTTACTTGTTATCACTGCAATTCTCATCTACAAGTAT
GCCAGCAATAACAAGCCACAAATACTAACGTGTGATCGTTGTCATTGACGAAGAGTGGCG
CATAGCTAGCCATCTGAACGATATCGCTGCAAATAAGGGGACAGAGAGTCTCATTAACTT
GAGCGGTTCTTGTTGCTCAACGTAAAATGATCACAAGATTACTCAGTGGATGTTTCTTGT
TAATTTCTGAACATGTTTTTCATTTTCTTTTGCCTTGTGTTGGAAAAACAAGAATCAGGT
CACAATTGCCAAAGGCAATGTCCCTTTATCCAGAAAAACTTGTGCATCTCCAAAAACAGA
CGAATGCCTGATTGTTAATTCCCAGGACCCAAGAAATAATCCAGATAGGAGGAAGGAAAG
GATAGAGAGAAATCACCTATTTTTCTCTATGCCGGTGAGGAAAGCAGCCTCTGCTAGTGA
AGCGACAAGGCTTCCGTTACCACCATCGCCAGGCTTTTCTTCTACAGCAGCATACTCACT
AACAAACACCTGCAATGAAATATTGCAAAGTCACCCTCAAGAAAAATATCATTGTGAAGT
CAGTGGCTTGGTGCTAAGCTACTCCCTGTCTATGCAGCATCCACGCATAATTATAAGGAA
GGTAAATTCACATCGTACTGGACATGAAAAATCAAGGCATACCTTAGGCCCAGTACGAGG
TACATTGTCAAACTTGGTCTTGTTAAGAAAAACCCCAGAAATGTTTTCATAGATCTACAG
AGAAATGTAACATTTAGTATAATTCGATCAAGAAAAGACAACCCAAAAACTGGTGACAGG
GTGGGTAGTTTTACATGGAAATCATATAAGTCAGCAGGATGATCAAGTTGCACACGTGAG
CCATCACAGTTCGATATCATTTGAATGTCAGGATAAGCCTCTCGTATGGCAGTGTGAAAT
TTGAGGTAATGTTCTGTTCAAGAGAATTATATAAGTTCATTTGCAAAGCAGGATATAAGG
AGTATCTGTTAAGTATTTACAATTACTATAATGGAAATGAAAGTTATAATGAAAACTGCC
AATAATTTACCTCTGTAAAAATTGAAAACGCAGTCCTCATTCCCTAAGGCTACATATTTA
ACTAGGAAAGGCTCAGGATGCCCCATGGAGGATCTAACACTACCCCATTTTGATTCCGCA
CTGCCCTTAGCAAACTCTAGAGAATCCAATATATCCTGTAGCAAGACAACTCAATTACCT
TCCAAATAGTGAACTCAAAATCATCAGAAATGCATTGTTCTGAAACCTCAGTGTGGTACG
ATCTACGGTGGACATTGAAAACTTCACTGTGCTTGCAATGCATTTAAGGAGGAATATTTA
TCGCTTATAGCATGAATGGTTGATCCGTACACTGAAAGATCTAGGACACTGAAAACTTAC
CTCTACAAGGGGTGCAATGTCAGTGATGTTAACTTTATCGTGATGGCTGATTCCTAAATT
TCAAGATCTCCGAGTTAACGGGTATACTAGTAAAGTACTGATCACCAAAGAAATCAATAT
ATGAAAAATTAAAATGCAAATAATGTTATACCGATGTTCACCACCCAGATTGGTGTAGCA
CCTAAGTCTTCGGCAAGCTATTTCAAAAGAAACATAAGGTCAGATATGGTTACACGATAC
ATCAAAAGAGCAAAACCCAATATTGTAAGGCATACCTGAAGAAATTCATAATACCCAAGG
CCATCATCAGTCCAGTAATGCCAAACATCTCCAAAATGCCCAGGTCTTTGCTCCCATGGA
CCAATAGTTTCCTTCCACCTAAATGCATTTCTCAACAATTCGCCTTCCACAAAGCAACCT
CCTGTCAAATAAATCACACAAATGCTTAACTCAGATTGTGTACAACTGGAAAATGTTAGA
ATGTTTTTTGTTTAAATCAGTTTTCATAGACTAAGAAAAAGGTAATCATGTGGTAGGACA
GTGAGAAATCATTGTATCCAAACAATGGACACAAACATTGTAGATTCCAGTAGCTGGTGG
TTTTGAAAACAAAGAAAATACCTGGAAATCGTAGGAAGCGTGGTCTAAGATCCAAAAGCA
TGGATATGAGTTCCTTGCGAAAACCATGGCCCTGCAGGTGTTTAAAAAAATGTTCATCAA
CAACTCATGTATACTCATAGTAAACATAGTTATTAAAGAACAATAGTTTCTTTTGAAGTT
TCTCAAAAATTAACTATAGGTTATTTTACGTTGACAGCATCAAGGATAACAATTGAACTA
ATATCTTTGTGACAATTGATTTCCAATTTCAGCTACGCTTGAGGAATATTAACACACAAA
ATACTCCTTCTCTTATTCAAAATAGAATTACTTTGATGAGGTTTCCCATTGAACATAAAA
TTGCTCATTAACAAAGCAGTGCAGTTTTTAGGTATGAGGTGACGAAAAAGCTAAAATTGC
AATGCACCTTGTGTGTGTCTGAAGGCATAAGTGAGACTTGATCCAGCCATATTATTCCCC
TGTTCAAAGTTGTTAGTTCAAGCCGTGAGCTTCTGCATGTTCCTTGAGCTAACAGTTGCA
GCTCTATCTTTGTCCAATTTGATAAACCAATATGCCTGAAATGATGCAATCATTTTCATG
GTTAGTTAACAAAAGAACAAATGAAATATGCTGTAGAAGTGTTAGGGAAAAGATGTATAC
TGTATAGAGGCTGACGCTACAATTTGCGATCCATTTGAGCATGTTAGTGAAGCTGTGAGG
TTCAAATGTTCCAGTGATCTGAGATACAGGGCAAGATTATAGCTTTTTCCTTGTTCTATA
TTCTGAAAGTTGAAATGCAAAGAATATGATTAGCTCAGGAATAAATATTGTTAGTTTTAT
CTTTAGAGAAAAAGAGTCTCTTGGACGTGTCAATCTGTAGATTCAGAAAAATATATTTTA
TTATGCCTTGTATTTCTTGAAGGAAGACTAATTTATTTATTAAGAAAAATTCATACCATG
CCCCAGAATCCAGGATTAGAAATGCCAACACCACCAGGCGGACAGTGTTCACAAAGAACC
TCCATCTTTAGAGCAAAAACATTTCTACTGAAACAAGAAGATCTATCTGTTGTTACGCGT
ATGGTTGATGTGTCCCCAAGGATTAACCATGGCTCAATCCTCGATGGAGTAAGGGCGCCT
CCAGCTTCAAAACCTGAACCATGAAAACCACAAAAACTAAATCCTTGGCCTTCGTGCTTA
ATATTTTCCTTCTGTATTTGCAATTTTACATAATTTTTAAGATAATGACCAACACAAATT
CACAGCGTCAAGTCACTTCACATACCATTTCTGCAACAGATGTAAAAGTAAGACTAAGTG
TGGTACCTCTGTTACTAACTAGTTCTGCCTATATTCCACCAGCTCCGGCGTGGTTGATCT
CCTATATGCAGAAGACAATAGAACGAAGTTTAGCATATGTTAAGCTAGAAATCATGTAAT
ATGTGTATCTAAAAATATGTTCTAATAGAGAAGCAATCAACTAATTAGGTGATCGGGAAG
TGTGCTTGGGATGTGAATCAGGAAAATACTACCAAACAAACTTAACAATGTGCTTGGAAA
GTGAATCAGGAAAATCTTACCAAGCAAACTTAACAATGTGCTTGGGAAGTGAATCAGGAA
AATCCAGGAAAAAGAAACAAAAGGGAACAAATTTCAGCAAGTCTCAAGAGGTTTTACATA
CCTCAAAGAACAGACCAAACATAGTCTCTGGTATCTTCTTAGCGGCAGAGCTTGAGACCT
CAATCTGCACATCCGAAACTTCAACACCATGACAAGTGAAGGTAGAGAGCAAGAAGATAA
GGAGGAAGAAGAAGCAGCCATTGGAACCCATGGCTTGGTCCTTTGCTTTCTGTTTCACAG
GGTCTGATGACTACTGTATATATGCAGCCCATGTGCAACACGCCAACACCACTGCCCCTT
CTTTCTTTTTATTTTTTATCTTACCAAATTTGTTCACAATTATTACAACCGATCAGTTTC
TGTTGTCAGTGAGTAAGACTGAGGAAAACAAATCGCCAGCATGTGCAACACCACTGCCCC
TTCTTTCCTATTATTTTCTATCTTACCAAATTTGTTGACAGTTATTATTACAACATATCA
GTTTCTGTTATCAGTGACTAAGACTGAGGAAAACGAATCACTCCTGCATTCTACACCCTA
AATGTTTCTGTTAAGTCAAAATGTCCACGATCAAGTGTTAATTGCATGCAATTAATAATG
ATCAAGTTAATGTACCAAATTATTTCCAGTTAGTTCTAATGGTCATGATTTGGTGCTAAT
CCTTGATAAATAAGACCCGTAATGTTTCCCTGTTAGCACCTAAAGATCATGTTTAGGCAC
TAAATGACTTCAGGTAATGCAAGATAATGCCAATTAGCACAAGTATTCATGTTTTAGGCA
TCGGCGCCTAAGCATTTAGAAGGAGAGGAATTACCAATTAAGAAACGAAAAGGAAAAAAC
TCTTAATGCTTTTCCCAAATTATGAACCCGGAACCCTAGGTTCTTCCCAAATCCGAACCC
TAAATGTACGAGTTACAAAACTTACAGCACGCCGCGTGGCCTCCTACGTGCCACGCGCGG
GATCGGTCGCCATGCGTGGGACTGGCGCCCCTCGACCCGAGGACGCCTACGTGCGCGCGT
CGCGGCAGTCACCTCCTTACGGCCGCCGGAACGATTGCCGGTTCGATCTCTGTCTTTAGA
GAACTGCGGCTGTGAATAAATGAGCCTGCTGCGGGTCATAAAAGGGCCTTCTTCAACAAT
GGGTAGCAGCCCAGGTTAATTTGGGGTTTTTCTAATATTATTTGTTTTACACAATTTTTT
TGGAAACCGATACACGATTTGAGATTATTTCAGAAACATTGCACCGTCGATTAGAACAAG
GTAGAAAAGATTCCTTCGTCTCTAAAAAAGGTCGAAAAAATCAAATCCACAAGACTGCTC
CCTATCAGGGATGAGAGAGGCAGAACAATGCAAGATTTGATGACGAGAATGGATTGGCCG
AAGATCTTGATTCCAATCATCTTGAAAGAAGAAGATGATGAGGAGGTGCCTATTCCTGCT
TTCATGTAATCATGATATGTCGCCCGTCATGACCATGACCATGAACGACGGGCATCAATC
ATCCCGGAAGTATCACCTAAACAATATTGAAAAATGGGCTCAGTATGGCTGGCAACTGAA
GCCAAGGGAAGTTGTGACGTTGTGGGCAATTTCCATTCAAAGGGTCTTCCTAAATAATTT
TATTACATTTACGACTATGTTGAAATTTATTTTCCACATCTTTCCAGTAGATTGATTGTC
TGTGTTGTAATGGAGCCAATATATTGCGACATTACTTGTGGTGCAGACTAATCATCCATG
AGAACAGAAAGTTTTGGTGAAATAGTCGACACATATAATTGACTCCATATATGCTATGGT
TAGGAAAAGCATGACGACAACACAATTATTTCCTTGATTTAAGTTCAATAATCCAACTTT
TAACATTTACCTGTGTGCTATGACTTGAGTTTGTTTTACAAGTTCGGCCAAACATACTAT
GTCCAATTTCCGAATCCACTTTGAACATGGTGCTGCTATGCCATCAGATACATAATTCAA
AACAAGGTACCAGTTGTCTTACATAATACCTTTCTCTACAATTCGGTGATCCATATCAAA
AGTAGTTTTCCACCGTGTATTAAACTTGAAACCCATTCTATTTTTGTCCCAAACAGATCA
AGATATAGCTACTTCTTCACTTCCTTACATAATCAGATGTATGTAACTAATAGTATATTT
CTAATGATATGCTTTCCTTGGTATTGCTTTCACATCTCATTATAAAGGTGTTCTGCATTC
TTAAATGAACCGGCGCATACACATCTCCATATACAACTGCACATAGTTCAGTTCTCTTCA
TATGTTTTTTCCTTTTTAAGAAGACATACATGATTTCAAAACTTGCGTGAATATTTTCTT
AATCTAAAGTCAGTTGTCATCATATGAAGTCATTACCTATTGTCTATTTGAAAGCATGAC
CTATCATTATGTCCAAATAAAATATCATGTACATGGTTCAAGGAATTGTACTTCTTTTAG
CCACAATTATGGGATGCACAAGCTTAATTATTCCCCATGTTTCCCATAAGTCAACTATGG
TTATTTTTTTTTACTTCAGACCATATGTCGAATTATAGACTGTTTAATATACCATTTCTT
TGTACTATCGAATAGGAGTGCCAAGCAAAAGAATTTGCAAACAAATCTGACATAAACTGA
TACACAATTCATTTGATTTTACCAGTTTCCAGTATTAACATGCACATGTTACTTGGTTTC
TTATACAAGGAGGATTTATGCACATCGAACTTATGCTAATATTGTCTTTCCATATAGGTT
TTCAATGATGCATAAATGAAAAAACATATTTTTTTTCTTTTTTCATGATTTAGTGTGTAA
TCGGATTGCTAGCCCGTGCATGTGCACGGGGTTGATGACTAGTAGAGATAATAACACAAC
GTATGACCATGTGGCGTTGGGTCCATGCTAGATCAAACTTCCCCTAAAAAAATATCAAAC
TTGTGGAGGATCGATATCAGTGTAAAAGAAAATTGGTTGGACTAGCAAAAGAGCCTGTGC
GTTGCAACGAAAGAGTAAATAATACACGCTCTGAACGTAATATATTTTCNNATGGCATCA
CATTTGTGTTGCCGACGATGGCCTTACTGCTCATACAACGAAAACGCGTTTGAATGTATA
CAATCACTCGGAATAAGATGAGAANNNNNNNGTTTCTCCCCACGAGGTTTTCCAAAGGTG
TGCATGTGTGGTTAACGATGGTTTTCTTTCCTCTCAATTTGGTTTAATTTAATGGATGTT
TATTGCAATTTGTATCGTCGCCGGAAAGAGAGAAAAAAAGGGAATGTGCACTACAGATTA
AGTTTGCACCAAAAATAATATTTAAAAAGTATTCAACAGCTAAAAATAACATCCTATT
