morexGenes - Barley RNA-seq Database

Contig contig_1561763
Source Contig contig_1561763
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1561763 (8494 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_1561763

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_11751	1	1952 bp	MLOC_11751.1	Available	Available	LOC_Os07g38730.1, FRAME:-1, EVALUE:0.0, 13107.m04008 protein tubulin/FtsZ domain containing protein, putative, expressed
CDS Structure of MLOC_11751

Contig Sequence (8494 bp)

>contig_1561763 8494 assembly3_WGSMorex_rbca.fasta
CGGGGTCTGATCGGGCAGGTTTTTTCCGCCCCGACCCACATTTTGGCGGTTATTTTCCGG
GCCGAGACGGGATACGGGATCTGCTAGAGTTGCTCTTACAATCCATTTCTTTTTCCTTGG
GTATCCTCTGATGGTTTCTAATTGTTTTTTCTTTTTTTTTTCTTTTGATTTTTTTGGTTT
TAATATTTTGTTTTATTTTCTTCTTTTCATTTCTATTTTATTGAATTCTTATGTTTGAAA
CACTAAAATCTTTAAACTATGGAAATAGTTTCTCAAATTATTGAACATTTTTATAAACAC
AAAATGGTTCGAAATTTTGTAAACGATTTTTCTGAGATTATTTTGACTGCATGATTTTTT
GTTGGATTGTTCAGAAAACAAATCCTTCAACATTTTTGAAATCTGTGAACATTTATAATC
TAATTCATGCTGATTCACAAACTTCGTGAAGATACTTTAAATCTTGTATTTTTCATATTC
ATGGATCTTTTGAAAAATCATGGATTTTTTTAAAATTATTGAAACATTTTTTATAATTCA
TGACTTTCTAAATTAAAATTAACCATCTCAAATAAGAAATAAAGTAAAAAATATATAAAA
AACAAAACTATGCAGTTGCTTGGCGACTCTACTACTGGAGGGCACAGCTGAGGCGGTCTG
GCCCACCAGGGGTTGTGACGTAAGCGATGTGATTTGTATCACCCTCTTGAATTGAGATAG
AGCATAATTGATTTAATGCAAAAATTTGGGAATTGTGAAATATTAGCTAGTGGTTGGTTT
GTTTCCAACTTTTCTTATCAAGCTCACAAAAACTTATCAAATTTTAGCAACTTTGCTTTT
GCCAATTGCTGGCTTAGAAAATATTGACAATGCCAAATGTTGGCATCAAGTCAATGGGCC
TCTTATCAACTTTCATGGGTTGAAGCGAGAGCCTCCAAGCTGAGCTCAAGTGAAGTACCC
GTATTGGCTTGTTGCCAACTTTTCTTATCAAGCTCGGAAAATGTTAACAAATTTTTGAAA
CTTTGCTTTTGCCAATTGTTAGCTTGTTCAATATTGACACCCCTAAATGTTGGCATCAAA
TCAATAAGCCTCTTAGCAACTTCAGCTTGGCCGAAGGGAAAGCCTCCAAGTCGGATAGCA
TGGCACAATGTAAGTGTGGACGCCATTTGCCTTGTCTTGTACTCCAAACCTTTGGGGTCT
ATCATGTTGTAGGATCATGGGCCGAGCTAATTGACCTGCCCATGATATAACCGGCCTAGC
GAGCCCAGGCATGAGGTCAGGCCGACTTCCGGTAAGGTGAGATGTTAGCACTCCCAGAGA
ATTGATTGTAATTTATTTATTCTCTATGAGTGTGTTCGTAAGGATTAATATATGACTTTT
TTCAAGAAAAAAAGAGGAACCGTCGCCAACTAAAAGACACTTTGTGTTCATAAGTTGGCT
AGTGGCACGGTTGGTGCCTACCTCGCAGAACACTTGGGAAATCTTTTATCAGCGATCTAC
GGAATTTACCAACCGCACTGGCGTCAGGTCGTTAGATTCTGTCGTGTGTACAGATCGAAA
CACTCCCCCAAAGTTGTCACCTTAGCAAATGAGTAAGCTTGGTTAACGATCTTGGTTTCA
AAAGGTAGCAGGTATACGATCTTGGAATTTTAATGTATTTTTTTATTATGTTTTTAGATG
CTTTGTACTTTCGGTGAACTTTTATAATTGATCTGATCCTTAAAAAAAACGTAGCAGAAA
TAGGATGGCTACAAGATGCAAACCTTATCAGGATTTCCACATTTCAGTGGTTCAGACATA
CAAGGGGCATGTGCACTCAGCATATAGTCAATAAACAGAAACCTCCGTGGTACTAACATG
GCACAGTACATTAGAGAGCATACAAATATTTGCAGATCGGCTCAGAATGGCGCATGCACA
CCAAACTCGGGACGAGTAGCATCGAAAGCCAAAATGTGGAAATGGGGTATCAACAATCAT
GGCCACCCTAACAACATCTTCAGTACATTACAGGAAAGGAAACACGCATAACAGCAATCA
ATATGTAACGCAACGGAACCAAATTACCGAGTATACAGATCAAAGCCAATCATTAACCAG
CCAACTACCTTATTAACCAGCTACTTAGTAGTCATCGCCCTCGTCGCCCTCGTCGTCCGC
GCCTTCGGCGCCAACTTCCTCGTAGTCCTTCTCGAGGGCGGCCAAGTCCTCACGAGCCTC
CGAGAACTCACCTTCCTCCATTCCCTCGCCGACGTACCAGTGCACGAACGCACGCTTGGC
GTACATCAAGTCGAACTTGTGGTCGATGCGCGAGAACACTTCGGCGACAGCGGTGTTGTT
GCTGATCATGCACACGGCGCGCTGAACCTTTGCCAGGTCACCTCCGGGGACGACGGAAGG
TGGCTGGTAGTTGATGCCACACTTGAACCCGGTAGGGCACCTTTGTGATGGCAGCATAAA
TATGTTAGTTAGACAGTCAAGTGTCAACTTTTAAGAGGATAGCTGCGCATGATAAATAAT
ATAAGCGCAACTAATAACGCGATAAAGACAGCTTACCAGTCGACGAACTGGACAGTTCTC
TTGGTTTTGATGGTTGCTACCGCGGCATTGACATCCTTGGGAACAACATCACCACGGTAC
ATCAAGCAGCAGGCCATATATTTTCCATGCCTAGGGTCACACTTGGCCATCATGCTTGAG
GGCTCAAAGACAGCATTGGTGATTTCAGGCACAGAGAGCTGCTCATGGTAAGCCTTCTCG
GCAGAGATAACAGGGGCATACGACGAAAGCATGAAATGGATACGTGGGTAAGGGACAAGG
TTGGTCTGGAACTCTGTGACATCCACATTGATGGCACCATCAAACCTCAGGGAGGTGGTA
AGAGAAGATATGATCTGTGATATCAGCCTGTTCAAGTTGGTGTAGGTTGGCCTCTCAATG
TCAAGAGACCTCCGGCATATGTCATAGATAGCCTCGTTATCTAGGAGGACCGCAACGTCG
GTGTGCTCAAGCAAAGAGTGAGTGGAGAGGACACTGTTGTATGGTTCTACAACAGCTGTT
GAGACCTGAAATACAGAGTGGCATAAGATAAAAGGGATAAAGATAGGCTGAGCTGCAAAT
AATGTAACAACATATCATATCTATCCATACTGTCCCCACAACAGCTAAGATGCAGATAAC
CTACTCACATGAACACCCTGAATGGTCCACAGTCCAGTCACATGGACAGGTAGGTACAGT
GCTATGGAATAATGTTGGCTCATAAGTAGTGCATGCTTTACAGATACCATATATAATCAG
GGCTCTGAGTAACCAATTCTACGCCAGCATTAGCATTTTAGCTTTTTCACATATTCTATT
GAAATATCTAGAAATGATGAAAGAGCTAGCTTAAAGACAACATCCTCTCAGAATACAAAA
TTAAACAAGACTTAATAGTACACTCGAATTTTCTGAAACAACACACACATTAACACGATA
ATGGTACATGAACAAGTTATACCTGTGGGGAAGGGTAAATGGTGAATCCAAGCTTAGATT
TCTTGCCATAATCAACCGAGAGGCGCTCCAACAACAGAGAACCCAGTCCTGATCCAGTTC
CACCACCGACAGCATTGAACACCAAGAATCCCTGCAGCCCGGTGCAATTGTCTGCCAATT
TGCGTACACGATCCAGACATAGATCTACGATCTCCTTTCCAACTGCATCACACAAATATA
ATCAGAACTGGATGCATTCATAATCGCAGTAGACTTGAATTTCAATAGGGATCACAGAAA
TGTAAGATGAATTACCAGTGTAGTGGCCACGGGCGAAGTTGTTGGCGGCATCCTCCTTCC
CAGAGATGAGCTGCTCCGGGTGGAAGAGCTGGCGGTAGGCACCGGTGCGCACCTCATCGA
TGACAGTGGGCTCAAGGTCGACGAAGATGGCCCTCGGCACGTGCTTGCCCGCACCGGTCT
CACTGAAGAACGTGTTGAACGCATCGTGTGCAACCCCAACCGTGGTGTCACTGAACCATC
AACCATAAAGCAGCATTAATACATGGATTGGAAGAAGCCTAAGCACTGATCTTTGAACTA
ACTTATCTACATCCATGTTTCAATCAATACTTATTCTGAGACAATAGGAACAGGGTACAG
TCTGCGTAATTATTAATGGTTCTGGAATAAGCATTGGACCAAATCAACAAAACAAATCCT
CCCCGAGGATGCCGTTTTTAGTAGCTAGCCGGTAAACTCTTCAATCCGTGCTCAGTCCGG
TACTCATAGCTCCATTGCTACGATACTAGGAGTATTTATGAAACACCACATTTCCAAAAA
AACATTTATTAAGCGTCGCAGTACCATTGTCAAAAAATTCGGATCTCGCGTCTTAAAAGG
GATAAAAACTAGCAACCGTCTCGTGGTACGTGCCTACAAATTTTTAGTACAGTCTACAAA
AGAACACGACGTCTGTCCGGTCTATAACAGAAACAGAACATGCATGAACTGAAAGAGTAC
AGAGGACCTAGGAGAACTTGTAATTTGATTGAAACGTCGCACGTCTCCTCGTGTTGTCGC
CGATCTCTCAACAACCAACAAAATGAAAATGAAAGAAAAAAAATCCCTCCACATAAACGT
ATCGCAATGTCCAAACGGGAAGTACAGGCTGACGGATCATGATGATGATTCAGGAAAAAA
AGAACTACCGCAATCCCCATTCGCAATTCGTACAATTTACGGGGAAAAAAGAGGGGGGAA
AGAGGTAAAAACACTACTATATTATAAGAGAAAAACAGGAATTCAGGGTCAATTTAACCG
TGATTTACGGCCAATAACCCGCAGCGCCTCGCGACGTTAATGGACGGAATGCGTTTGCGG
ATGGGGATCCAAGAAGGATCACGCACGTATGTACCTGGGCATGGTGCCATCCTGATTGAT
GCCGTGCTCGAGGCAGTAGAGCTCCCAGCAAGCGTTGCCGACCTGGATCCCGGCCTGGCC
GATGTGGATGCTGATGATCTCCCTCATCTCGTCTCCTCCTCCTCCTCCTCCTCCTCCTCG
CCCCTCGCCTTCTCTTCCGGGCTTTCTTGGGTGTAAAGAATGGCCTCCTCTGCTTCTCTC
TCCCTTCCCAAAATGTGTGAGATCGGGAGATAAAAGGGGGCGATGAGAGAGGAGGGGAGA
AGTGGAGGAGATCGGGCAGTTTGCGGGCGCAGCGTCGGGGATGGAGGGAGCGGTTGCCTT
TTACGTGAGCCGATGCTCCGTCCGTGGACGTGATTCACGTGAGCCGGCCCGGCCCCCGTT
CTGTTCAGTTACCGATGGCGGTCACGTTTCCTGGAGTAAATGCCGCTCACGAACGAAAAC
GGGTCGACGAGCGACGATAACTGTAACTGCCGCGCATGCATGGTCATCGTCACGTCCCTA
AAATCGAATCATCACTCAAAGCAATCCGTGGTTTGATCGATAGGACCGTGATATCCCTTC
TCCATCAGACTTTAAGTTTCAGACTTGACGTTGGTGTTTGTTTTTTTAAATTTATTACAG
GTTTTTCGGTGATGTTTTTTCAGTGAGAGGAGACATTTTCATCGACAACGAAGACGTCAG
TGACGATTTCGTTAATTTTAAGATGATGTGCCGGCTTAATCTGTACGCTTGTGTATGTAA
ACGACTTCGATTGTACTCTACTAAAAAAATTATTGAAACATTACACGTACAACGAAAACT
AAAATGAATCGGAGAGACAAGGAATCGGATGCTGCCATTTTGTTTTAGGGACATCTTTCT
CCTATTCATTTTTTTTTTTGGAAAAAGGCATGTGGATCCATTAATCAAACCAGCAACATA
CATCATTGAAAATACGAAAATGATGATGAGTGAACGTAATGCCATCCCTGGGATCAAGGG
TGAATCTTTCTTTCCCTAAAAAAGTGTAAATCTTTCTTTCTTTTTTTCTTTCTTTAGAAA
CAGGCACGAGCAATGCTCGACTTTGAATTTTAAAACCCAACGACAAGGTAACAAAGTTCA
AGATTGCAACGATGGTTACGTAAATGGGATACAAAGCTCAACTACAAGAGGAGCTTAAAT
AGACATACACGAACAACCTATCTATCTTTGACGTCCCTGTAAGCGGCATGAAGGTGCTTA
AGCTTGACGACGATGTTTGCACCGGCGGAGCTATGTTGGAGGGGAGGGCTACCCGAATCA
ATTTCTGAAGAACTTTTTAGGGACCCCTGGATTATATTCTTTTTAACATTCTCCCCCTCG
CCCCAACCAAACACCGATGATTTGTGTTTGTTTCCACAATGATTTCCGGCTAGCTCCGTC
ACTGGATGTTTTTGTTGCCCGCTTACTATCCTTTCGTCCTCTTGGGAGCACGCTATTGCT
GAAAGAAAAGAGCTCATTTGAAAACATAGCTAGCAATGCGAGCATGGGATACTTTCTTTG
ATGGCTAATTTGTTAAGAATAGTTCAAAGCATCCAGGCTAAGACTCCAAAAACTCACCAC
GCTAAGCGACTCTGTTGCTTGTGGCATTGGCTCATAAGAGTTAGGATATTGTTCATGGAG
GTCGGGTTCAGTGTGATACCAAAACATTCCATAACACAACTCCACAAAAATGGGTCGACG
ACATTTGAAAATGATGGTTAGCAATTTCTGGGCTAACACAAAGGGAGCAACACCCATTGC
CAGGACCACGCCTCTTATGCAGGTTAATGGCCGAAGGAATCTTATCGATGGCAGCTTGCC
ATAAAAGATGCGAACTTTTAGCGGCATCCTTGCCACCCAAAGAGCTTTAGCGAAATTCAC
CTTAGGGTCACAAACTAACTTAGCATGCATAGATTTACAGAGAAAGTTCCATATTTTTTG
GGAGTCTGAGAAACTGAGTCCTTCTCATAGGCCAAGTTAATGTTAGCCACCACAATGGTA
AGGTTTGAACTCTCAACGGGGAAAGAGACCTAAATAAACTTACAGCAGGCAAGCCCGGAA
ATAAAAATGTCGCTCTCTAGGGCCTCGGGCTCGACAACAATCGAAAAGAAAGTCGGGGAA
GGTCGTACAACGGATTGCCGAAGAGTCACGAGGATAACCATAATTTAGTATCTTGGTCAT
TGCCTATCCGGAATGTAGCGCCCAAGTTTAAAACTTCCTTGCATTTTTTGATCCCATTCA
GATATGCGACCCTCTCATGTCTGAAGCAAGCGAAGAAAGAACAATTAGGAAAATATTTAG
ATTTGAGAAGCCTCGCCCAATGCCTCCTGTCATTTTGCACAATTTTTCAAATCCACTTAA
CAAGGAGAATCGGGTTCATAAATCTTGCATTAGTAATACCTAGCCTTCTTCAGGCCTTAG
GTTTGCAAATATCACCCATTTAACCATGCAGTATTTCCTTTTCTTAGTGTCGGCTTCTTA
GAGAAAACCTCAGCCTTACCTCTTCCAATGTTCCAAAATCCCCATAGTAAATGTAGGGAT
TGCCGAAAGACACACACTAGTGAGGATAGCCCTTGCGGCCAAGGACATCAGTTTTGGAAA
CGTGTGAATCTTGACGCAATGATATATCGCTCTAGACCCCTCAATAATAAACGGCCAACC
GTTCGCTCGGATTATACATTTTGCTCAACGTGGCTTGCATCTTGCCAACATAATTGCTTT
ACAATCTCCCCTCAATCCCATTTTGTGTGGATGGCAACTTTTTATGTCTTTGTCCATTAA
ATTTTTGAACAAGTGACTATATAGGGCATGACAGGTTATATTTTTCAGGCTTGTTGCACA
TGTCAACTATATAAGCTATATCATGGCAATTTATGCGTTTTTTAGGATTTTTACAGATGG
ACAGTGCTATATTTTGACAAATTTATACTCCCTCTGTCCCAAAATTCTTGTCTTAAGTTT
GGCTAGAAATGGATGTATCAAAATACTAAAACATGACTAGATACATTCATATATAGAAAA
ATCTAAGATAAGAATTTTGGAAGGGAGAGAGTATTTTGGTAGATTTCTACATATGCTAGC
TCACTTTTTAAAAATATGGCATGTACTTAGATATAGCATGTCGATTCATGAATATGGCGG
CAACTTTCTGCACCATACCATAAAAATTCTCTGCATTGTAGCATGACAATCTCTATCATG
TAGCATGGCCATTTACTACGTTGTAGCATGTCAATTCCATCATAGAAAAAAAGCATGTCA
ATTCCTAAAGTCACATGTGAACCTTTCTCCTCATGTAGCAAGGCAATTCTATCTATTGCA
TCATTGCCATGTTCTGAATACATATTATATATTATGACAATTCTCAACAGAAATCTCTGG
ATTTTTCTGTTGCAGCATGGTAATTTTCTTTGCTCGCAACATAGCCATAGAATGATAACT
TCTCTAGATGTGTGAAGGAGGGGGTGGGTAAACAATTGCTCGCAACATGCAGACTAGTCT
TTGTCGCGTGCATGGTGTCATTCCACCGGGGGAGCTTTCTAGTGTGAATGAAGTCATTCG
CTCGTGGGAGACTTGTTGGAATTATGCCCTAGAG