Contig Data
morexGenes
Links



Map Locations of contig_1561636 (1910 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1561636

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11690 1 633 bp None Available Available LOC_Os07g08640.1, FRAME:+1, EVALUE:2e-41, 13107.m00857 protein retrotransposon protein, putative, unclassified
MLOC_11689 1 505 bp None Available Available None





CDS Structure of MLOC_11690






CDS Structure of MLOC_11689






Contig Sequence (1910 bp)

>contig_1561636 1910 assembly3_WGSMorex_rbca.fasta
TGGCTGCGGTCCCTGAAGTCATGATGCGCGAGGGGTACGATGTGCTTCTGCAAGGTCTGG
GCGTATCATATCACTTCGTAGAATGTATGCTGCAGGAAGTCGGGTCACCAGGCCGGGCTC
GGGCCGGGTCACCGAGCCGGGCTGCCCATGCCCAGATTTACTCTAACCCTTTTTTTCTTC
TTCAGTTATGTGCCACATCAGCATGTTTGCTAGTCCCAAGGATCTGATACTAGCTATGAT
ACCCCCACTATGGCTAGCCTCTCCCAAGGAAACGTAGAACTTCAATGTCCACAAGGGGCT
TGAAGATGTAAGGAGTATAGATAGGCACGTGACCGTAGACTGCATTGACGAGCTAGGAGT
ACAGATAGGCAAGTGATCGTAGACTGCATTGACGAGCTTTTTTCATATCACATCAAAAAA
CATCCAAAACTATGATGTTGCCTTTCTCCTTGTGGCACATTATTGGAATGTCAATCAGTA
TGTGCTTCCTGGCTTTCTAGTTTTTCTTTATTTTCCACTGCGCCCACCAAATCCGTTGAT
ATTTTGTGTTTCTCATGCCATGCGAGTCCACCGTACCTTTGTCCGACAACCTTTCTCTAG
CCCTGATCCTTTCTATACAACATTTGTGGCCTACTTGCCCTTGTTGTTTTCTATAAGATT
TTCTGGACTATTTTTGCATTGTAGATCTACGCCCATTGTGCCTTAGCCACCGAACTTCTT
TCGCCGTCGGTTGTCTTGGGCTATGATTTTCTGTGCGGTGCTTTATTCTCTTGATGTGCC
ATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTGTATCTTCAAGTGATGCGGT
GTCTTTCTCTAATGTGCCATCTCTTCGTTATCCCTTTTGGCTTGACTCGACAGGTTTTGA
AGATTCATGCTACGGCGATACTCTCAAGACACGGATTTGGATTATTATTATTTTTCTAGT
GATACACTTCTTCAAATGCAGTGTTATTGCATACGCTTCGAATTTGAGGGGGGAGGGGGT
TACGGAGTATTAGTATTCGTCCAGGAGTCCTATTAGCCTATGTTTCCTTTCCTTGTACCC
CAAGTCATGTGTAATATATATATGCCCCATGAGCTATGTAATACAGATAAATTGCTTTCA
TAACACACACTTCATCCCGCTGCAACATCCATATACCGCTAGTTCATTGGCACGCACATT
CTTTGAGGGCATTGCACGCCTTCATGGTCTTCCACGGTCAATTGTGAGCGATCAAGATCT
TATGTTCACCCGCGTTTTTTGGCACGAATTGTTCAAATTGTCCTGTGTTCAGCTCCACAT
GAGTTCAGCTTTCCATCCGCAATCTGATGAACAAACTGAGGTGGTCAACAAGATCATAGC
CATGTATCTCTATTGCTTAACAGGAGATCAACCGCGTCGCAGGCTGGAGTGGTTTTTCGT
GGGCAGAATACTGTTATAATACATCACACAACTCCTCCCACCGTGCTACACCTTTTGAAG
TAGTTTATGGGCATTCTCCGCCTTGTCTACGTGACTCTAGTCCCAACAATTCCCAGGTGG
CAGCTATTGACACAGCCCTTCAGGACCGTGATTCTTTTCTCCACAATGTGTGTGAGCATC
TACTTCTGTCCCAACAACAGTCCAAAGGTCCAAGCACTACTATGACAGTAGGCATCGAGA
GCTCTCCTTTGACATCAGCAAGTGGACATGCTTTCGCCTTCAGCATCGGCCAGCAGCGTC
CCTACCAGCAGGGCAAGTTGGCACCTCGTTTCTACAGGCCATTTCAGGTACTTGAGCGCA
TCGGCTCAGTCGCATACAAACTTGCCCTCCCTGTTGGTACACATTTACTGGATGTGCTGA
TGTCACCATGTTCAAGAAGTTCCACAGGGATCCCCCCCCCCCCCCCCCCC