Contig Data
morexGenes
Links



Map Locations of contig_1561432 (9056 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1561432

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11602 2 2301 bp MLOC_11602.2 Available Available None
MLOC_11601 2 1586 bp None Available Available None
MLOC_11600 1 176 bp MLOC_11600.1 Available Available None





CDS Structure of MLOC_11602






CDS Structure of MLOC_11601






CDS Structure of MLOC_11600






Contig Sequence (9056 bp)

>contig_1561432 9056 assembly3_WGSMorex_rbca.fasta
CCTGGATGGACGCGCGGTGGGTGGGGGACGCCGGCGCCGGCGCCGCCGCCGCATGAGCCG
CCGCCATGATGCCGCGTCTTCTTCTTCCTCCGCTCCGCTCTCTTCTTGGGCTTCGCGTTG
GCCTCCTGCTTTCCTTTTCTTTCTTACTTTCTGTGCACGGCTTCATTCACATGGACGCAG
TTAGCTACTCATATGCAAGTGTTGGGCCGTTTAAGCGGGCCTTTTTGCTAGATAAAGGGC
CCAAACTGCAGCATTCCTTGAACATGTAGAAACCCCTCAAAAACAAAAAATGAACATGTA
GCAAAAAAAATCGACTAAAACACGTGGCAATTCTTCTACAAAGACGTGGCAATTCTTTTT
GCTACACGAATGTCACATGATTCCTCTCATATAAATGAAAAAAGGGGTCGTCGTGTTTGG
AGGTGGCTGATGGTTGCTGCCCTTGGTTGTGGCATCATCTCGTGGGACAAGGCGGATTGC
TTGGAGCATGTGGAGAGGTATGAGGATGGCAGACTTGGTGGTCTCTCTCGACATTGAGGA
TGAGTGCAGGGGCGGAGCCGGGATTCGAACATTAGGGGGGCAAAAATGATAATAATTGTT
TAATGGAAACAATAGAAGTATTTATCCTTAGAAGTAGCATTCATATGACTGTGCGGCAAT
ATATATTTGATAAGACCAACAAGATACATCTTTATTGTTTAATATTAGCTTTAGCATGTA
CGTAAGATAGATTTATATTTTTGGTAGATATCCTCTATAACACTAAGCTCTTTAGTTTTA
AAGAGCCCACATTCAACTAAGATTTTTAATTAAAACTGGGTCACTAGATTTTGATTGGGT
CACCGGTTTTTACAAATCAATCGATAACAATCGGCATATAAAAATATATCAATCCCATGG
GCCCTCTCGGAACCTAGAAAAAAGAATCGCAAACATGCGTTGCCGTAACACAAATATATT
ACATACAACCATCGATGTAGAATTTTTTCCACATAAGTACAAGTTGATTAGCAAATAACC
TACAATCACACCCCAAAGAATTCTTTTGGATTTGTTTCTTCAGATTTCTTTTTCATTTCC
TTTCTTTGGTTTATTTGGTTTTTTCGTTTCTCATTCTACATTTTTTTGTACATATCAAGA
ACATTTTAATATTTTTCCAATACAAATTTAATATATATATATATATATATTCAACATTTT
TTATACACATTTTAAACAGTTTTCCAAATGCTTGATTAACATTTTTTAAATAGAAATTTC
ATATTTTTTAATACATGGTCGACATTTTTTGTATATTCATCTTTAGCATTTTCCAAATGA
TTGATTAATATTTTTTAAATACAATATTTACATTATTTGAATACATGGTGAATATTTTTC
CAATACACACTTTTAAAACATTTTTAAATACTTAATTAACATTTCTTAAGTACAATATTA
ACATTTTTCCACACATGGTCAACATGTTTTCTATACATATTTCACATTATTTAAATGCCT
TATTCATATTTTTTGCATACTTGTTCAAACAAATCAAATGCTTAATTAAAGTATTTTTCA
AAAAAGAAGATTAACATTTTTAATACATTGTAAATGCTTTTTTCTATGTAAATTTAATAT
TTATTAAATGTTTGATTAACACTTTTCACATTATTTTTCAACACTTTTCAAATGCTTGAT
TAACATCCTTTTTAAATACAATATTAAAAACATGAATACATGCCGACATTTTTCTATACA
CGTTTAACATTTTTCAAATGCTTGATTAACATGCTTTTTAAATACAATATTAAAAACATG
AATACATGCCGATATTTTTCCTATACACGTTTAACATTTTTCAAATGCTTGATTAACAAC
TTTCGCATAATTGTTCAACATTTTTTCAAATGCGTAATTAACACTGTTTTAAATAGAAGA
TTATCATTTTTTCAATACATTATCAACATTTTTTCTATACACCTTTAGCTTTTTTTCAAA
TGCATGATTAACATTTTTTATATATTTGTTTTACATTTATTTAAATGCTTGATTAAGGAC
TCAATCATATGGATGCAGAAAGTACAAGATTTCCAATCCTAGCGGGAAAAGGAGGAAAGC
TGATACTCAATTTAAAATGAGTAAACATAATTTCATACTCGATCTCATGGATCTCTGTAA
AATTGTGTGGATAGTCGTATTGCGTTTGATTTTGGTTTTCCTTTTCTTTTGGTTGTGGGA
GGCCTAAGTCCCGGTCTTCGCATTTAAGCTCTTTACATGTATGTACAATTACAACTCAAA
TTAGGTCGGATCTTTTTAGAGGCATTTGGGGTAGCATCACGACCACAAGAAAGCATCCAA
ACCAAAAGAAGAATCTAACTACAATACCATATAAGTATTCTCCAACGTCACCAGAACTAC
CAACAACAAAAGGATCATAGCTATCATAGTGACAGTAAAAGAAGGGAAAACCCCCTTAAG
GATGTTGAGGAACCAGGACAACCATCGTCCTCTCAAAGGGGAAGAAAAGAAGCAGAACAT
CACCCATCATTTTTAAGCCACTAATTCTCAGGACCCCCATGTCTTTGGCCTTGCGACGGT
TTGTAAACTTCATTTGATACCCGTTCGAGTAGCTTTGCCCCCCAGCAATAATTGTGGACT
AAGTATTTTATGTAACAACCTGTGAATTAAGTTGCACTTTATATATCTTGCTTCGTGGGA
GAAGGCATCGCTTGCAGCGAGGCAGATCCCATTTCAAACCCGTCATCAATAATCAATTTG
GGCGGTGCTTTGACGAAAACAAATACAACAAGACCAGGCCAGATCTTGAAAGCAATAGTC
AGAAACTCCATTTCGAAAAAAGAAAAGAAAAACAGAGGGTGACTAGGAATCTCGATCCCT
CAAACCCAACGCCATCGTCTATCCACATGCACCCGACTGCGGCATCATCTGCATATCAAA
TTGGCGCCTCCCGTACGAACCAAGACTTGCGATAAGCGTAAACTTAGAGACCCGGAGAGG
ACTCGGAGGGGCCATAAAAATCCAGGATCCTTCCGTGAACTCGAAACAAAGCAACCACGG
ATCATCATGGATTCATAGCCCATAAGAACCAGCCGTTGGTTGGCTCGGTTCTCGTCCCTC
CCGCGACGTGCTGCCATGGCGCCCGGGCTCCCTCTCGCCGTCGCCTTCTTCCACCTCTGC
CTCCTCCTCTCGTCGTCGTTGTCATCGTCTTCTGCCCGGATGCTGGTAGCCCCCGATGCG
GCGGAGAGCACGGCCCGCAATGGCAGCAGGACCGCCTACCACTTCCAGCCCGCCAAGAAC
TGGATGAACGGTACGTAGGAACGAACGCTACTCACTTCGCTCCGTTCTGAATAGTTGGCC
GAATATGGATTCATCTAATCTGAAATCTTCTGTGTGTGTCCGATCGATCGTGGATTCATG
GCGAAACTGCTGCTCCGTGTGGGTTCATGGTGAATCCCGTGGGGCGCTCATCAGATCCGA
ATGGTACGCGGTAGCTGCTTCTCCTTTCTTCATTTCTTTCAGTGCATGTGAGATGAGTGG
GGTTTTAATCGGCTCAATTGCAAACTTGGGCCGTCTATAATGGCCTTTCCTAGTCTAGTC
TAGATTATTAAGGGCCCAAACTGTAGCACGGACTTTGACATGACAGACAATTCATGGTCT
AGAATTTCGTTTTAGAAAGTAAAACGAGACGCCCGCACGCACTCCGTTCCCTGGAACTTG
TCCACCAGAATTTTGCTTTTGCTGAAAAAAAATTAGAATTTTGTTGAACTCTGGAATGTC
TTGACAAATTTTTATGTGGCATGATTTTTTCTCATGGAGAAAAACACGCGCATTATGCAC
ATGAGTGAGGAAGAGATGCAGAGACGGATACGAGAAAGGCCATGTTACACATGAATTTGC
CTCAACCCACAATTTTGCCATGAGTTCGGCTCATTGACAATTGGAAAACATTGACCCGTT
CATAAGGAAAACCGGGCCCAAAACGGTACAATTTCATCTTCGCCGTTAGAACCTGCCTCC
GGTGGCAATATTCTTCCTCCTGTCTCGCCATGTCCATCCCAAATTCCCCATGAACCGCGA
GGGCCTCCCTTTGAAGCATTTCAGCTCCTTGCTCCAGGACTGTACAATCATCTTCAGATT
GCAGGCCTGCTCGGTAACAATAAAAGAACAAGCATAACATAACAGGTGAATTCAACGGGC
AACTCGACAAGTTTTCAAAACAAACTCTGTTACCCAGTTTTCAGTTTTTCACACAGCCCA
ACAATCTGAAGGTTTCTGTTTTTCGGCAGAAACATTCTCCTTTTGCAGCCGAGAGCTCTT
AGTCTCAGGATCTCTAAACCAAAAAAGGAAAAAACTTCGAGCCTGCCGACATTAGACAGT
ACACCACCAACGAGCCTGCCGACACTCGGTAGTAATGGTACACCATCAGTTTTGCTATGC
CAAGTCCTAGCAGGCACTGCATGCAGGTCGACCATGCTCCGCCAAGCACATCTCCAGGGA
CCTAAACTCTGACGCCCAAGCCCAAGCTGACCGACCTAACAAATACTGTCACCGATGGTC
CGATACGACTACATTCTCGCCTACAGGTGTCCTATAAGGAATTGGCTGCATATATAGCAC
GGAGACCAGTCCACCGGAAATTTCGCCCGACATTTTCTCCTTGGGCGATGCCGGTGCCGG
CGCCGGCGAGGGAATGAATCATCTTCAGGCGATCCACGTACGGCATGGGGCCAAACCCCA
AACTGTCCCAGGGAGGCAGGGACTCCTCTGTTCATGCTGGAGACCATTCCGCGCCTTTCC
TCTGCCGGCACAACGTGTTCACCGTGGATCTTTCCACGTGTGTCCGAGCTAGCCGGCTAG
GGCGGCATTATCAAATATCAATATCTGCATACCAAATCGCCCGTCGATGCCAAACAATGG
CGACAGACAAGCGGCCGACAAACATTATAAACACGCGGCGGTCGACCGGAGAAGAGGGCT
GATCCACGAGTCTGCGTCTGCGTGACTGTGCGCGAGCTCGAAGCAGAGCAACAGGCATGC
GAACCACGTCCGAATGGTCCAAGCCATTTTGTTCCCTTGTGCGCGCGTACGTCTTCGCAG
TTCACACCGACGACACGGATGCATGGCGCTTCATCTTCATGAATCCTCTACAAATTTGCT
GGGCCGTCTAGGTCTAGGCTGGTGTTTTCTAGGCTGTAACACGCGGCGTGACGCCCATTT
CTCCCTCTGAAAATGTCTTGCCGGATTTTGTTCCGGCCGCCCATGTTCAAGAGTAGATTA
CCCAGCTCTGCTCTGGTCAATCTTGCTCTGTCAAGCACGTCTCCAGTTGCTTGCAGAGCT
AGAAAATACTCCAGCAGACAGCAGGCAGGGAGTACAATTCTCACCGCGACCGTATGTAAT
CTCTAGCTAATGGATACGTACAAGTCATAGATGAAAAGTCTGCCCAATGCTTTCGGTGGA
ACTTCCTTCCACGCTACTCTCTGCGGACTGCGCCCTGTTTCCACATGTAATCTCTCTTGT
GTTACTAGTAGTAGTAGCAATTCTTTCCTCCGGAATTTTGCGTACGAAGACGTGAATGAA
GTTTGTCAACAAGAAAGCACGTGCACGCACACGGCTGAGGGAGAAAGAGACACGGGAATG
AGAAAGGGACCGTCAGGGTAATCGTGATTTTCTGAATCATACTGCATCATTGGACCGTTT
TTTCTCTCTAAGAAATAGGATTACCCAGCCTGTGCATCAAACGATGCACACAACCATCTT
TATTCATTATTCAGTAGAGTCTGACAGACCATTTTTTAAATAGGATTACTCAGCCTCTGC
ATCAAACGATGCACACAACCATTTTTATTAATTATTCATCACATCTGACAAAAAGTCTTT
TTTAAAGTAGGATTACCCAGCCTGTGCATCAAACGATACACACAACCATCTTACTAATTA
TTCATCAAAGTCTGATAAGGTAGATAAATGAATTAATCCAAAGCCTTCTTTCTCACGACC
TCAATTGCTACACCTATAAGTTTGATGAAGTGTCATGGCACATCCACGCACACCGTCTAG
TTAGGTGGCCATCGGCCTCTCTGAACAAGCCGAGAGCATCCACCGGTGTAGTAGATCCTC
AACATAGACTGCATGTGCATACTGAAGAATCTCTCGCTGCCATCTTTCACCGTCTCATCT
TTTGGAGAGATCAATGCATATGCCTTGCAAGGACCAATTGTCGTTGACGTTAGACAACGT
CACTATCTTGCGCGCGTCCATTAGCATGCGTCCATCATCGAACCCCCATCTTGCGCGCGT
CCATCAACATGCGTCCATCATCGAACCCCCACTGCCCCATGCCATCAAGAACCATCGTTG
TCGGCGCGTCAGATGCCACACCACTCCACCGTTGCAGTCCTCCAGTGGCACCTCTAGCCG
ATGAACTCCTCCAAGAATGATGCCCCCAATGAGGGGAAACAACGGTGGAGCGTCGCCATC
ATCCGATTGATTGGTCAAGAGTTTCCTCCGAAGGTAGCGGAAGGAGGTGGAAACTTCACC
TTGATGATGCCTTCAAGAAGAAAACGGCTCGTGGGCGTCACCATCATCGGCTCCGGCCAC
CCGCTGAAGACAAGGTTTTCACCCCGGACCTGTCCAACGAGATACCAACCGATATGTTGT
GCACCGGCCCGACCACCTTTAAAGCCCCAGATCTGGCCGTCCAGATCCGATGACCACCCA
CAAGAGCACTGTCACCGTGGGAGTCCTAGTGCACCGGCCACTACCGGAGTGCACCATCAT
TGGAGCCTAGGAGGAGGGCCACCACCCCACCTCATGAAACTGCAAGAGCCGTCGGGAAAG
ATCCAGCTCCTGCTCGTCACCGTCATTGATCCGACCAAATCCGAAGCACCAGATCGTCGA
CGTAGTTCTGCCTTGGACTCGGGTACCACTATTCCATGTCATTGCGGGCTGGTTGAGCTT
CACTCCCCACCACCGACTGGGGGGCAGCCGCCCAGGGATCCGGACCAGACGCCACCGCCG
CCACCGACCACTCCCAACCCACCCCCATCCTCTGACCAATTTCCACTCGCGCCATCACAA
GCGCCGTCACAGGGAGCCGCAGCGCCGCCATGGAGCGAGGGAGAGGCCGCGTTCCTGCGG
ATCCAACACCCCTCGCCGCCGTTCGATCCGGGGGAAGAAGGACCAGCCCTCGGCCCCGCT
GGCCAATGCACGGACATTGCTTGTGCGGACCCCCGACGACGACGAAGGGGAAGGAGGGGC
GTTGGCTACTAGGGTTGGCGCCTCTCATGTCGCCCGTGAGGGGCTCAATGGGAGAGGGTC
GTCGGAATGAAAATTCGGGGTCGTGTGATGGACAATCAGAAAACATTCCGGTATCGCAGG
AGCCGAGCTCTTCATTCATGGTGACTTTTGTGTCGACATGGTGAGGGCCTAACATGACGG
ACGTGCATGTGAAGGAACAAACATGGAACACGGTGCTACGAAGCGTAACGTGATAGGACA
TGAGATGAGCCTGTCGACATGGATTATCGGTCTTGCCTTGCGCCGGGGAATAAGCAGAGC
ACCACACATGTTAATCTTCTGTTGCTCACGCGCCAGCTCGCCGGCCTAACAAATACTGTA
CCCCCCTAGCAGGGACGAGGGAGTGTAATCTCGCGCTGTTGTATCGATGACAGCCGTCGT
AATTACATCAAAAGTCGGGCCAATGCCGGCGGCGAAGCTTCCTTCCACGCTACTCCCTGT
CCCTGCACGCAGTTTCTCTTCAGCATGCACAGTACGTACTAATCACCACAGTGTCATCAG
TAGCAATCAATCATGGTTCTTCCAGAGCCTCAGAAACCTCGTCGCGCTTCCTTACACGCC
TCTCCATGCTGCACTCCGTTTCCACTGACCGAAGTCCGTAAGCTCCTCCAAACCAAGCAG
GCCGAGACAGCGCATGCAGGCAGGCAGGCTGGACGACATCACATGGTGGCCAAGTGGGCA
TGCAGCTCCTACGTGGCCGTTAGTTAACAAAGCCCGTTAGCAATCACCAACCGATCTTAA
TAACATAAACAAAACCATCCAGTGCCCATCCACCAACTGGCCGGAGAGACCCATGCATAA
TGCCCATCCTCCAGTCGATCGGCCAGCCGTGGAAGCAAGCAACTCGCGCCCTCTATGGCG
CGCGGCCATTTCTCCGGCGCGTCACCACTGAGGCCATGACACCGGACTTTCGTGTCGCGA
AGACGGCAGGTCGAGCCGGCAACGCCGGCCGTTGGCCGCCGGTGAGCTGAGCTGCGTGAT
TTGCCGTCTGGCTCCACGTAACGTAACGTCCACCCGTGTGTGTGTGTTGGATAAGATAAG
AAGGCATCCAACTCGGCAACGCGTGGATGATGGGGCCATTTTCGATTAATAAACGGCTCG
ATTCATAAACATTTAGAATCAAAGAATGCGTCACATCGGCCATCGCTGGGCCTTAGACGT
TTGATTTGTCATGTCGCCGGTAACCTTCGACGAAAAGAATGACCGGCCGGCCAGCCGGTC
AGACGAGACCTCCGTCGAGACGTGAGATCCAGAAATAAAACTACTAAATGGAAGAACTCT
TAAAACGTGTAGCTCTCTCTGGTAGTCTAGTCCTGGTATGCATTTTTCTACCCGTTGCTT
TGGAAGCGGTTAACATATGGTGACAAGAAATGAAAGGAACCGCACCGGTTGATGAAATCC
ATGAACGCGTGAAGAGTCCTAGTAATTGCATTGCTCATACTATTAGACATTTTATTAAAA
CTTCTAGCCGCAAAAAAAAAACATTTTAAAACTCGGTTAGTCATGTTTTTGGTAAACTTT
GGTATTCCCTCCGTTCCTAAATATAAGTCTTTAAAGAGATTACACTAAGGCCCAGTTTGG
TACTAGTGTATTTTACGGAATTTATGGGAATTATCCCGATCAAACCCCTCAATCCCCACA
TTTTTCATAACACCATTTGGTTCTAATGTATTTACATGTATCATCCTCACATTTCCCCTC
AAATCCTCAAATTATAGTGCATTTTTTGCAATACCCAATACACTACCCCTACCTAG