Contig Data
morexGenes
Links



Map Locations of contig_1561367 (4968 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1561367

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11572 2 1803 bp AK368609 Available Available None





CDS Structure of MLOC_11572






Contig Sequence (4968 bp)

>contig_1561367 4968 assembly3_WGSMorex_rbca.fasta
TTGGTTGGCCCAGGCCGGCCGCGCCGGCGACAACGCTCAAGGGCGTCGTTTTTTTTTTGG
AGACGTCGGTATACATTTGCTCCTTTTTGGAGACGCCGTTTTTCTGTTATAAGTTGTTTT
ATATCTTTAGTTATGGATATGAAACACAAAACACCAAAAAAATTAGTTGTACTTGCTACT
CATGAAGATGGGGGACCTTTTAAAACCCTCGATGTTGGTTATGTGAAAAACATTAAATAC
TATTTTGATAATTCTGAGAAAACCCCATTCAACTTGATAATGGAAGACACGTTGGATCAA
TGTGAGAACTTAGGGATTATCGCTTGTCTCAAAAAGGGAAACATGTATGGGACCAAATTA
TAATATTGTGTTGGTGTAATTGAAATTTATGCTTGAGATGTGATTATATTTGTTGCTCTA
AGATTAAGGCTCTACACCTTCCTTTCAATGTGAATTTAATGATAATAAAACCTTGACTTT
TTATGCTAAAAGTGTAAGTAGTTACTATCATTGCGTCAACCGCCGCGAACATAGCTTATT
TCTATGCATGTTGGACGCATTGCCACGCTCGGGAGATGGCGTTGGCCAGCCTAGATGGAC
GGAGATCTCCTAGCAATGATGGTGACGCCGGCTCCGACGAGTTTGCCGGCAAGCCCAACT
GTATTCGGTTGGCTTGCCGGGCCACCTAACCGGCTACAATGCTGAAGAGCTCCTTCTTCT
ACTCGCCGGAGAGGTGTTTCACACGGGCTTTGAAGCCGAATGCCATAACGGGCGAGGCGC
CACCCAAAAAGGTGTTTAATATCGACCGACACATGGACGAATGTATGGCGCTCGAGGTGT
CCAAATAGGATCCTTGACACACGTGCTAGTATAATGGAGATAGAAGGATATACGGATGAC
GTTTTAATCTGGAGAAAAGGTGCGTGCAAAGGGTGACATGCCATTTCAATGCTGTTTTTT
TACCAAGTTTCAATGCCGGATCTAGTGAGTGAATGCGTCCTCTTTGGGCATGCATGAATA
CAGCCATGACGCTTTCACAGGAAAATGGAACAGACAAGAAAGGGTTTCGGGCATGAATGC
AGCCATGACGCTTTGGCAAGAAAATGGAACGGACGAGAAAGGGTTTCGGCGACGGAGAGG
CAAGAGAAAACAAGGGCAGGAGTTAATTTCATCAAAAAGTATATTATGATGCTTCCAAGC
AACTAAGTTAAGAAAATGGAACGGACGAGAAAGGGTTTCGGCGATGGAGAGGCAAGAGAA
AACAAGGGCAGGAGTTAATTTCATCAAAAAGTATATTATGATGCTTCCAAGCAACTAAGT
TAATTTTGGTGTGATTTATTAAAATATACTCCTTCTATAAACTAATATAAAAGCGTTTAG
ATCACTATTCTACTCTACTACTCTACTGATCTAAACGTTCTTATATTAGTTTACGGATGG
AGTAGTAAAGGTTGGTTTCTAGATGGGGAGCTGTAGTATTCTGTTTCGCAGGTTGCCTGA
AGGTACATGCACTAGCGAAAGAAATAGTCTAAAAAACTGATGCAAATATTTCCTCCCATG
ATGAAATTACAACCACGGCAAGATACAAATTCAACAAGAAAACCATCTATCAATAGGTAG
CGTAACAAATTTAACAACAATAGAGCCCAAGCAAGTAGGCATGGTCGACACACTGCAGGA
GTAGAGTCTCAACAACATTCATTCAGGACGCAACGCATCGTCTTCTACAGTCTATTACAT
CCAACACATCTAGGTCCGCTGGGCGTAAACCTTCCACAACTCGGACAACAGTACCATGTA
CTCAAAATTGTCGTTAGCATCCACAAGATACATCAGTACTGACACAAGGAGAGAGTTCAT
CAAGAGGTTTCTGTGAGATTAGGAAAGATTAGGCACATGGTTTCATCCCCCCACGAGAAC
TGGCAGATTCAGGTGTATGCATGACATCAATCCTGTGGCAAAGGTTAAACAAAACGCAAG
CAGGTAAGCAGCCAGTGAAAACAACAGGTACCATGTGTGAGGTAAAAGGCAGAAAACACA
CTGCAAATATCAGTACCTCCTGAATTGGGGTGCTTTCATCTGCTTGCTTCTGCTCAACAA
CCCCATCCTCTGGGCCCTGACCATCTGTCTCCATCTTCTCGGCTTCAGCCTCCTCTGACG
CTTCAGCCATGTTGGTGTCAGGCTTGGGGAGCGCAAACTCTGCAGGAACTTGGCCAGTGC
TCAACGCCTGATATCACGGTGATGGACAGGTGCATGTCAGTACAGAGCATAGTAACTTCG
TCAAGCTGCACAAAGCGCCGGAGCTAAATGACACACGGCACGTTACCTTCTCAAGCCTTG
TAACTTCATCAAGTGTCTGAGAGTTCACGATAGCGGCCTACAGATTAAAAACATGTCAAA
CAAAAATTCACAGCCAGATGTTTTACAAAAGAAAACACAAGATACTGACATTTACAACAC
GACAAAGATACGGTCACTGAGAACAAAAGATGCCTCGGTAACTGGGATGGTCATGGACAT
CATATAGCTAGACTAAAACATATGAAAGTAAATAGAATGCCCATACCTAACATGACAGTA
AAAGACCTGACCATAAAATATCTTTCACTTAATGCAACAGCCAAGTAATAGGGGTTCTAC
TCAACTTGCAATAATGACATGAACAGGCCGTGTCCAAAATACAAAGAGGGAGTCAAGTAC
CTTGATAGCTGTGATTTGTGCAGCCGTCGGAGCGACTACTTTAGGGCCCTGGTCTTTTGT
GGTACCTTGAGCATCCATCACTACTGGAATATAAGCTTTGGCAGCAACCTTCTTTGCCGC
CTCCTCTGCCTCCTTTGAGTGGAACTTTTGGGCTGCTTCGGCTCTCTCCTACGGAAACAC
AAAATCTCATACAAAAGTTCAGAATCGTACACAAAACCAGGCACGGCAAATAATGCTAGT
GAACATGCCAACCAAAAAACATTCAATGGCATTCATGCATCTAATTCACAGATAATCAGT
TAAAAGAGTCGCTCGTTTCCCCTTTTGCTGCCAGCACTTCTGCGGTCAGTTCCAAAATCA
TTTTGGAAATCATTCCGAAGGAAATGAATGAACCTGTTGGGAATAAATCAACAAATCAAG
CAGCGGCAGGATTTCTGTGCATATCAACAACTTCTAATAAACTTCATGATAAAAGGATTT
TGGCATGGTATAAATCAACAACTCCTAGCTCCATTCAAGAAAGAACTGAAGAAAATGATT
AGAAGAAAAGAGTTTAGCCGCTGACAGAACTCATAAACTGTCAATTAATTGCAGTTACTC
TTTTCTTTTAGAAGTCCCAAGAATTGTCTTGACTTGATGCTCTAAAGGGCTAGCACGATA
GCATCTAGATGGTGTTCTCAACTAATACCTCTTCAATTAAAATAAACATGACTTAAAGCA
AACATAGTCTATTGATTAGCATAAAGCCACATAAGCCTGCAATGCTGCAAAATTTTGAGC
TCGTTTGAACTAACTCATATCTTAGATAAGTAAAACATATATGGGCAGATGTATAAGAGC
CGTAGATACATGCAATATGTTATGTCCAGACATTATATCACTGGATATCTGGGTTCATTG
AAGAAATCATGAACAGTTGGTTTTCCGTATATGAAGAACCAAGCAAAGTTCCATGCAGCA
CAGTGGCGCACAAATGGTAAATGATATTTCATCATTAAAGAAAATGCAAACGTAGATTAG
CTATCAAATGAGAGAAAACTGCTGCGAAATTAAACAGATGCCATTCAGAACAAAATCATC
GGCACTATGCAGAAGTATATTTGGACTACATGACAATCAAGAAATCAAGCCTGGCTACAG
ATGATTCAAATATCAAACATAATTGTGTTATCAAGAACTTGGTGGTTGCCAACCTGTTGT
TTCACTTTCTTGAAGTCCAGCAAACGCAGATGCTTCAGTTTGTGGATCACATATAACCTA
TAGTCTGGTTGCTTAGTTACGGTATTATCCAGTAAGCTGAGAAATTGCAGCTTTGGAAGA
GAGGCCAGGGGGTCAATCTCCGCAAGACTTGTAAGGCGATTGTTCGTCAGCACCAAAGTA
TGCATCTTGGGTAAAAACTCTACATAACAACAAAGCAAAGAGAATTGAAGAAACAGACAA
ACTATGGAGCAAATTATGCAAGTGACAGAAGCACATGGCAACAAGACAAGATAGTGTTCC
TCTTACCACCAAGGTTGGGATTGATACGTGTTATTCTGTTGTTGTTGATTAACAAAGTGC
CAAGGCGATTCATGAAAGGGAAGTTCTCAAGCTTGACAATCTCATTGTCCGACAAGTCAA
TCGTGTCAAACTGGTCCTGTTATAAGAAAAAGGAACAAAGACAGTTATAAACACAGCTAG
AAAAGGAACTGGAGAAGCTACAAGCAATTCAAAATGAGATAAAGAAAAACCTATGATTTC
AATTTCAAATAAAGCTAAACATCTAAAATATGAACTTGTTAAGCCATCGGTAATGCAAGA
AAGTAGGCTGGTAACACAATAACAAGCCTCGTAAAGAGAACTGTTATGTCCTGGACAACT
ATATAGAAGAAAAGCAAAAGTAACCAGGACACTAGAGGTGTGGTGATCAAGTATATAAAC
ACCCCTAGCAGCAAATTCTATAAGGGCACTGCTCATAGTGAAGAGTAAATTATTATTTTT
ATGAGGAAAAGCATCCAGCTTCACCAACCCTACAATATGCACCTCTTATCAAATTACTAC
ACAATGCACTCCAATATTTCATTTCTCCAAACCTTAGCTGGTATAGCAGTGCATAAAAAA
TACCATTCCGAACCGTAACAGCAAGATGAGCACTCTTTAGTGGACATTATGCAAAATATG
CTCAAACATTACTCATCGCTACAAATATCGGCCGATTAACTGCAGTTAACTGCTATCCCC
CCCCCCCCCCTCCCCCCCCCCCCACACAAACACACATCCCCCACCACC