morexGenes - Barley RNA-seq Database

Contig contig_1561361
Source Contig contig_1561361
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1561361 (7394 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_1561361

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_11568	5	2776 bp	MLOC_11568.1	Available	Available	LOC_Os01g43580.1, FRAME:-2, EVALUE:0.0, 13101.m04506 protein kinesin motor domain containing protein, putative, expressed
CDS Structure of MLOC_11568

Contig Sequence (7394 bp)

>contig_1561361 7394 assembly3_WGSMorex_rbca.fasta
ATATTCAAGTAATACCCAAGCATCTAAGCTTGGAGATGCCCCGGATGGCATCCCCTCTTT
TGTCTCCATTCTATAGGTATGCCACTTGGAGTTGTATTTTTATTCATGACAGGATATGAG
TTTTGCTTGGAGCATCGTTCATATTATATTGATGATGTAAAAACTCTTTGTTCACTTCAA
AATAATTTTTCAAACTAAAGAATGGCAAAAAAAATCAATGTGGTAGCTGGATGTGATCCC
ACAATAATCATAAAAGAGCAAAAAAGGTGTGGTGGCACTAAATACAACTCGATGTGATCT
CACAAGCATAAAAGAACAAAATTGAAAAAATATGCAATGCCACTAAATACAGTTGGATGT
GATCTTACAAGCATAAACAATCAACATGGTGCGTGGTGCGCGGGAGATAGGGTGAGGCGA
TCACGACAGGGGGTAAGGCATGTGGGGGCGATGGGGTTAGCCAAGGCATCGACATCAACA
GCCTTGATCGAAGGGATGTCAGGTCTTAAGATCAACTTTGATAAGAGCGAAGTTATCATC
GTGGGATACCCCGAGGCTAATAAACAAAGGATTGCAGATAACCTAAATTGCAGGTTGGTC
GCCTTCCCTATTGATTACCTGGGCATGCCACTCTCAAACACTAAGGTCCTCATGAGTGCG
TTTGACCCCCTTGTGGATAAGGTTGGAGAGCGGACGGAACCCTGGTGTGGTACATTTTCC
TGCAAGGGAAGTAAGACCGTCCTAATTGGCTCCAACCTCTCCAGCCTCCCATGTATATCA
TAGGGTTATGGTCCCTCCCCGAAGGGGTGCATGCTTCGTTCGACAAAGCCCTGGCCCGCT
TCTTCTCGCAGGCGATGAACGGCCGCCAAAATATCACATGGTAAAATGGGCCAACATCTG
CCTCCCTAAGGAGTGTGGCGGGCTTGGGATCATGGCGTCCAGCCGGATGAACGTCACCCT
CATGCTTAGATGGGTCTAGCGGATCATTTGCAATGACGGGGGCCTTTGGCTTTAGCTTCT
TCAGGCCAAGTACCTTCAGGGCTTGCCGCTCTTAGTGTGTGACTCTATGGACGGTTCCCA
GTTTTGGTGATCCATCCAGAAGATTAAACACGAGATCCGACTGGGTCTGGCGTTCTCCCT
AGGCAATGGAGATGGGACCCAGTTCTGGTTGGATCCTTGGGTTCAGGATAACCCTCTCTG
TAGGATGTTCCCACGGCTATTTGCTATTTGTGCCGACTCCTCTCTTCGGGTCTCGGGTGC
GATACGTTGAGGCTAGTGGAACATCTTGTTCCGCCGGTCTCTGGGTCCCGCGGAAGTACT
TGAATGCACCAATCTTTTGGCACCCTTTCGCCTCTCATCGGGAGATGCCCGGATCAGGCC
CGTTGGCTCCTCTCTCCTTCGAGAGGCTTCTGTGTGGCTTCGACGTACCGTGCCCTTTAT
CGTACTCCTACCGTCCGGTGGACCGCGCCCCTCTCGAAGGCGCCACTACCGCTGAAAATC
AAGATCTTCATCTGGCAGCTGTTGAGGGATCGCCTACCATCCGGTACGGAGGTGATCAAG
CGGCATGGCCCGGGAATTGGGCTATGTCCCTTATGTCATGTCGCGGGAAACGGGACTCAC
ATCCTATTCTCTTGTACGACTGCTAGGTCCCTCTGGATGTTTGTTCGGGACGCGCTTGGG
CCACAGTGGACGGCCTCTGACCTGGCTGAGTTCTTGCAAGCCAAGGCAATGCAGTCGGGC
AGCAATAAGCGCCTTTTCTAGCCGATCTTCACAACGATGTCATGGATCCTTTAGACTACG
AGAAATAAGATGGTGATTAAGAGGATTTTCTTGCAGCACACCTCTGATGCTTTTTTCAAA
ATTTTCATTTTCCTGCAGCACTGGCACCCGTTGGTTAGGTCAAGGGATCAAGCGCGCCTT
GGGCGGATGTTGAATGCGTTTCACACCTCAGCTCGCAGTCTTGCCCAACCGCCTTCTGCC
AGATGATATGACCATTTGGTGGCCTTTTTTTCATTTCTTCTTCGGGTTTTTTGGGTTTGC
TTGTGTTGTGGCCCCGGCAGATAGTGGATTTTATGTTGGTACCTCTAGTTATAGACTTGA
TGCTTTATTTATAAAGCGGGACGAAAGGCTGTTTCGAGAACACTGCAACTTGAGGTAACT
ACATAAATAAGGTACGTGTGCAACGACATACCGGAGTCTTCATGCACGGGAAAAAATAGC
AGGGTACTCATGTGACGCGGATCTACATACACATGGATTAAACTGAAGTACGAAGCACAC
GCATACAATGGAGAGACTCGGGAACAAATATGTTACGGAGAAGGCCACCGTAAAGCAGCA
GTCGACTAGCCATCTAGTTCTGCTTTCGCCGCATCTATGGGTTCAGAACTGCATCGGCAC
CGGCGTTCGCAAGGCGAGACCGCGTCGGTGCAGAGCTCATGGGGGCAGATAGACTCTGCT
GCCTCTGTCCCCAACTTCCTCATTACCCTCGGAGACGTGGTAGCGACGAATATGCCGCTC
TTATGATCAAGGGCACTCGGAATATAGCAGCACGCTATTCTCGTTTAAGCGCCTCTGGAA
CTGTGCCAGACGATCTTGTAAATCCACAATTCCAGCAGCTTTCTGTGAGAGGATACCGCT
TAGTCTTGTAACGTAGTCGTCCAGTTGGTTGCCAGGCTGATCTGCTTCTATTAGTAAGTT
CATCTCCTGACCAAACAAGGGGCCATTCACACGTTACGGCAAGATAATACGATGACCAGT
TACAGGTAACGCAATTTACCATTCTAGGCGACTAACCTCTTTAATTATGTCCAGGGTCTC
TTCCACCTGCTTTCTGTGAACACTAACTAAATCTTCCTCTTCCTGCACCAGTTAACAAAC
GTCAAAACCTAACCCAGGTCATATTGTATAAACGAAATGATGCAGAGGCAATAATACTGT
ACCTGAAGGAGGTCATTCAGATGGTCATCTTCGTCTGGCACAGCACTTCTAATTGGGTAA
GCAACAGAATTTCTCATATTATTCTCGGAAGCCGGATCTCTACCCTTCTGTGCCTGTTTC
CTTCCCTGCTGGTACAGTGTACCTGGTACAACGGCTATGCCTGTTGCTGCAGTACCTCTG
TTCCTTTGTTCGTTGAAATAACCAGTATTCGCCGAACTGAACTCAGTGTCTTCCCTACCC
TTGGGCATTCTATCCACATACGATGGCGATGGCTGTTCTTTGGCATACTGCTGCTTGGGC
CAACCAAACTTACCCCTTTCAGTGATATCATTCATTACCTCGGCTGGAGAGAAAGAGGGT
ACAACCGGAGCCAATGGCGAAGGACTCGACTCTCGTAAAGGTGCAGCAGCCAAAGGCACA
TCTTTCTTGCTGTTGCTTCCTTTTGACAGACTCTTCACTCTGAAGATGAGAATATGTTAC
ATGTGTTACATGGACAAAAAGCAGCTACTGCAACATAAAGAATGAATAAAGATAATTACC
TATCAGCATATCTCAATGTGTTCAGTGTATGTTCACAAGAGCCAGAACTAGGGGAAATGC
ATGATATCATGACAGTGCGCGAGTCTCCAATGAATGAATCTCGCAAAACTTCAGTCAACT
TGCTACCACGGAAGGGAATATGATTCTGATCATTATCAAGTGCTCTGATGCATTCCTTTA
AAGCAAGCAAACTTTTATTGATCTCAGCACCCTCAATTCTGCATAACATTTTTTAAAGCA
CTTCAGTGTTAGCAAAATACATATGTATACTCCTATCATAGAAGAAAGTTTTGTAAGATA
ACCTTGTTTGTTTATCATTTTCATTTGTATCAGCACCACGCTCACTGCCAGCCAGGTCAA
TAAACGACAACTTGCCAGCCAATCTGGGTGGCTTAGACTCATTGCCATCAACACGCCGTT
TGATAGCAAGCTGAAGAATGGCATGAGATCGTGATGACTCCTCATTTGCACCAGTTGTAC
CAGTACTTCTGGTGGCATTACCTCTCTCAATCAACTCCTTGATAGTTTCAAGATCAGACA
CCCTGTACTCTTGTAAACCAACAATGCAAACTTTCTGTTTTCCATCTTCTCTCATGCAAA
GTTTACTACATGAGATAATCATTGTTCAGAACTGAAACATCATTGGCTTTCTGCATAGAC
TTTATTTATAAACGTAAGAGATTTAGGTATAATGTACCTCCTTTCATTAAGCAGATCATA
TAATTTTCCTCCATAGATCTCAAAGAAACTAAAAAATAACTGAAACCCCTGATTACGATA
TGTATGGTGCATTAGTCTCAAAATGTCTTGGGATGCCTTTAGAGGAAGTGGTCTCATGGT
GTAGGTTTTTCCACTACCTGGATGGACAATGTAAGTTAGGAGTTGTCTTTAGTCTGCTGC
AATTTTAGACATGCATCTAGAGGATGTTGGAGATATACCGGTTTGTCCATATGCAAAACA
AGTTGCCTTTGTACGATTAAAAATAGCAGGAACCACCGGTTCCACTGTTTCACGATAAAC
CTGTAAATAGAATGAGTCCAGGTTGTTGAGAATAAATATATAATGCCTAATACTACAATT
ATATAGAATATGCGGATTGCTGATCACCTCATCATTTGAAACGTCCTCATCCAAAACAGC
GTCGAACACAAATCCATGCTTTTCAACATACTCAGTGAGGTCAACCTGCAGAATTATGTG
CCAGGCATGAAGCAATGAGAATAGACTGTCAGTAGCAAGTTAAGATCATATGGACAAGTA
AAAATAAGGCAGAATGATGGAGATAACAAGCTTGGCACAAACCTTAAGTTTAGTCTCATG
GACAGTCAAAGAATTTTGTTCAATGTCTATGATATCTTCTTCTTTCTTCGATATCTCCTT
TTTGTTCAGAGGTCTTTTGCGCACCTGCATTTAACATTACACATCAAAACTGTAAAAAGT
ATATATCCTCATAGCTTTGTATGAGCCATTGAGAAAGATTCAATCATCGGGCAAGACAAA
CAAACATACCACCACTTTGATTTTGGCAACAGGTGCTGCCTTCTCTTTTTCAGGGAAGGC
CTTGAGGTAGTTACTTTCAGCAAAAACAGCAGACTTGCTCATCTGCTTGTCTGTACCGAA
GCTCATATCCGAATCTTCAAAGCCTCCTCCATTGGCATAACCAAACTTTTCAGCACCATC
ATACATTCCTTGTACTTGAAACTGTACGTACATATGAATTCTAGTTAATACAGAATTTAC
AATGTGGGCAATATTATATGACCATTGCTGCAACATAAAATATTTTGGTTTACCAATGAT
CCTTCATCAGCATATTAAGTACACTACACTATCTAATCTAAAGAACTAAATTTACAGAAA
TCAATAGCTTATAGTTATGTCGAACCATACAGTGTACGGATTTTCTTCTCCTGAAAAGGA
AGGTCAAAACCTCCCAGTCTTTGCATCCCCTGTTGAACTCAGCCATAACTTCATTAAAAT
AGATGCAAGGCATAGATGCCGAAGCATATATTTGCAAGCAGAGTACATGGCGTGGGCAGC
ATTGGCAGAAACATGACCAAAATGAAACCCAACAAAAAAACACCTATGGATGCAATGCCA
CCTGCCACGTCTCACCAGCTAGCTAAAACCGTACCAAACATTTAATTTCGCACAAGTAGC
TGAAATTCACCTAAAAAAAGACCAATGCCAAAACAAAAACTAAACAGTCTTAGTTTGCTT
TCATATGCCAATAATCCAGAGAAAATTAAAAATACTTCTGAGGACCCATGCGACCATGCC
TCGACAACTGGATTCAGAACGTCAGATCAATAACACTTCCTACAATCAAGAATATTACTG
TATAATCTAACGCAGCCACAAGGAGATCATCAGAACAGAAGCAGTACTTATAACAATTGC
AGCTCTCGTCTTACATCGGGGATAAGCTCGGTATCAAAGGCATGGAGATCGAGCAGCCCG
GGGCTGAGCTGGTGCCTCTGCCCCGGAGACTCCCCAGCCGCCGCGTCCCCTCCGCGAAGC
CGTGCCGGCGTCGCTGGGTCCACCGACACGAAGATCTCCCCGTCCCCGCGGCGCAGGCCG
CCGCGCTGCACGCAAAATCACTCCAAATCCAAATTCATGAGCTGACCGGAGATCACGCGC
TGCACGCAGATCTCGAGGAATCGTTGGCCGTACCTGGGTCCACCTGCCGGCACCGCCAGC
CGTCCCGGCATTGGAGGGGACATCGAAGAGGAGCTGCTCCGAGGTGTAGCGCCGGCGCCC
GCTCGCGTTCATAGCCACCGGCGAGGTAGGGCTCGGGCTGCCGGTGCTGCCCGGTGGACT
GGGGAGCAAGGAAGGCAGGAAATGGGGAGGAGCGGGGAGGAGCAGGGGACAACGGGAGGC
GGAGCGAGTCGTAGAAGAGGGGAGTAGAGTAAAGGCCTCTCGTTTCGGAGAGCAGTGGAT
TTGCGGTTTGCACCCTAGATTTCGACTGACGTTGCGCTTTCGCCCCCCAGTTTGAATTTG
GAGTGGAAATCAAGGGAACGGGTAGGAAGGGGAAAGTGGGCCGTGATTTGGGGCGAGGGG
ACCTTTTCTCTTTCGTCCCTGCAGCTTTTTCGGTTCTGGTTAGGCAAGGCCTGTCACCAC
GGCTGGTTGGTACAGATTTCGTTTCCTTCCTTTTGCTTAATTTATTTATTTATATACAGT
AAAAAATCCCGATTTTTAATGAGAGTTAGGTCCTACTAGTACGTCAACTAATGGGGTGCA
TAATATAGTTCTCCCCGTGTGGACACTATGCCAAATGGAGCTTACATGATCTTTACTCTT
CTGTGTGACCCTTGGCCTAATAATGAGGTACCATTGGTAGGACCCTGCCCTAGGTACATA
TCCCCGTCATTAGCCCCCGAATGAATCGGGGTTCGAGTGATGAAGGGGTCGATGTAAGTT
CTTGTTGAGTCGTGCTGACCTTGGTCATTTTCCTGGGATTGATAAAACTCGGGTCGACTG
AAATCTCCGTCATTCGCCTTGATCGATTCTGTTGTAAAGTGTGCCCGAGTGATTTTAGAT
GCTTGGAGTTATTCTGAGTGACTGACGGGATCTTTTGATATGACGGATCACTGCGGCAGG
CCCGGATCTCACGGGATTCGAAATTTCGGTTTCCGCACGCCTCGCAGGGATGACGCAACT
GTGAGGGCAAGTGGAGCAACGACGCATCGATTATCGCACCATCATCCTCACCACGCGTCA
CGTCTCCTCTCATATCGGGATAAGCTGAGATCTGGGGGACCCACCAGTCGGTGACTGAGT
CGGTCGGCTATAAATATGCGGCTGGGGCTAGGGTTACGGCTGCGCCTTGATCTTTGATCT
CTTCTTGCTTTTCCTCCACCTTCGTCCCACAAGCTTTGCTCAGGATTTCCTTCACCACGG
CAGCCATGCCGAAG