Contig Data
morexGenes
Links



Map Locations of contig_1561353 (6078 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1561353

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11562 6 1009 bp AK360280 Available Available None





CDS Structure of MLOC_11562






Contig Sequence (6078 bp)

>contig_1561353 6078 assembly3_WGSMorex_rbca.fasta
CCATGCGACGTTCCCCAACATTATTGATGGACCATCTATGTTCCTTGGTATCGTGATTGG
TACTCTACACCCATTGTTGAGATATTGTGTCATGGTGTTCTTTGACGATATCCTCGTCTT
CAGCAAAAGATGGGAGAACATGGGGATCTTCTGCAGCAAGTGATGGCACTCTTACGTCGT
GACCAATGGAAAGTGAAGAGATCGAAGTGTAAATTTAGTCAACGACGAATCTCATATCCG
GGACATTTCATCGGGGAGAAAGGAATGACAACAGAAATAAACAAAATACATGCAGTTGAG
AGTTGGAACATGCCCACAAATGCTAGACATGCGCCATTTCTTGGGTCTCGGTGGGTATTA
TCAGCGGTTCGTCCGGAGTTTTGGTGTGATCACAAGGCCGTTGTTCAACTTGCTGAAAAG
GCCTCTCGTTTGTGTGGACTGGCAACACAGAGCAAGAATTTCAGTTCCTAAAAACCATGC
TTGTCACTGCTCCAGTTTTGGTACTACCAGACTTCTCCAAGAGCTTCTTTATCGAGACAG
ATGCCTGTGAAAAAGGGATAGGCGATGTGTTTCAACATGAGGGCTATCCCATAGCATTTA
TGAGCAAAAGTTTGAGCCCCATGTACCAAGGACTATCGAATTACAAAAAATAATATTTAG
CCATAGTGGTGGTTGTCGATCAGTGGAGGCCCTACTTGCAGCATGGTGAGTTCATCATCC
TCATTGGTGAGGAAAGCATCATCACTTGGAGGAGCAATGCTTAAACACACCCTGGCAGCA
ACGAGCTTTCACCAAGCTCCTCGGCCACCAATACATCATCAGATATAAGAAAAGTACACA
TAACACATATGTGGATGCTCTATCTCAATCTAGTTCCGGTGAATTTCTGTTTGCAGTCAC
TACATTTCAACCAACTTGGATGTAAGATGTGACATCCAATTATAACTGCAATCCCCAAGC
CCAGAAACTGCTGGAATAGTTAGCTACCGAACCTAATCCGAAAGGGTGATTTACTCTGCC
ACAAGGCATCTTAAGTTTTAGGTGTCGTATTTGGTTAGGAGGATCCACATCATTGTATTA
CACTATTATTTCAGCATTCCCCGATAGTCTGATGGGAGGCCATTCATGATTCCTAACCAC
TTTCAAACACATTCATGGCTTGTTTGTGTGGCCCAACATGAAGGATCATGTGTTGTAGTT
TGTTCAATGTTGCGCCATTTGTCAACGAGCCAAATCAGATCAAGCTGCATCTCCAGGTCC
AATCCAACCCCTCCCAATTTCCACAGAACCATGGGAGATGATAACTATGGACTTCATTGA
TGGATTACCTCAATCATGCAAGTTAAATTGTCTTTGGGGCACTTTGGACAGACTCACCAA
ATTTGCACATTTTCTCCCTCTTGTCCACCCTTACACAGCGGCCAAGGTAGCTCTATTGTA
CATGAACAGTGTCTACAGAATACCTGGCTTCCCAAGATCTATCGTCTCGGACCGCGACCC
TGTCTTCACCAACCACTTTTGGTAGGAATTGTTCTAGTATGCAGGCACACAGCCGAGAAT
GCGCACGACTAATTATCCTCAGACAGATGGTTAGTCCAAGCGATTCAATCAATGTGTTGA
GACTTATTTGTGTTGCATTGCACTCTTCTTCTCACGTCGATGGAGCTTCTGGATCCCTTT
GGCCCAATTTTGGTACAACAACACAAATCACTCCAGCATTAATATGTCTCCATTTAAAGC
TATGTTTGGTCATGAATGGCGCCACTAGGTGTTTACACATGCCAATTCATGCTCGGTGCA
TATGCCCTACAATCGTCACTAGATGAACGTGCGGTGATCCAGGACTTACTCGAACAACAT
CTGAACCGAGCTTAACAATATATGAAGCACCAAGTAGATAAGAAACATTCTCATCGCAAC
TTCAAAATATGGGAAGCGGTTTTTCTAAAACTGCAGCCTTACATCCAAACATCAGTTGCG
AGGAGGGCAAATCACAAGTTGTCCTTCAAATACTTCGTCCCTTTCTCATCATTGCCAAGA
TCAAGGACGTGGTATACAAATTACAACTCCCACCCCATTTTCAAGTGCACCCAGTTTTCC
ATGTGTTGCAACTTCGACGTTGCTTCGGCCCTGGTGTGGACATCTCTCAAATTCATCCTA
ACACTTGTGATGTCCTTGTTGTACTAGTGGTAGTGCTTCAGCAGCGATCCCGGAAGAAAC
AAGGGTCCATGGTGGAGCAAGTTCGTGGTCGTTGGTTGGACCCCTCGGTGCTTGCGGATA
CATGGGAGGACAAGCTCAACCTATATAACCGTTTCTCAGATGCACAGGCTTGGGGGCAAG
CCTCGTCGCAAGAAGGACGGGATGTTAACAGCGGTGAACGACGCGACCGCCACGCCGCGC
ATGGCAATTCAACAAGAGGTGTGCGGGGCCAGAGTGGGCCATGGTTGTTAGCACATCTCC
CCACACCACTTAACCGAGGCGAACCACATGAAGAGGTAGCCAAAGGAACACTGACCCAGA
AGGCAATGGCTAGCTACCTCTCTCTCACCTACTTTCGATCTCAATTCATGTAATCCCTAG
CTCTTCCTGTAAAACGAGAGATAACTCGAATTCTTCCATGTAAGTGATCTAAATCGTGTG
AATCATGTCCAACCAATTACAAGTTAGCACCACCTGACCGCCGCCAGATCTGACGAACCT
GTTGCGGCCAGATGATGTGGGGCCGACGGGATGTCAGTCGGTTGCATGTCCAGCACGAAA
CCTTCATGCAACTACAAGGGGTACGATGCAGCCGGGCATGAGCGGAGCTACATAGGATTT
GGGTGTACAGATTCTTTTTTGCCAGAAATTTGAATACCATTTATAATTCACACATATATA
TAATATTATATATCACATAAATTACGAAAGGCGAGTAAAACTGGGAATTTTACGGGATTT
TGTACACCCATTGTTTAGGTGCCTGCTACGCCACGCAACCAGTGGAGGGAAGTTGCAAGA
GATTATCAGCAACGTGGCCCTGAAACCAGCTAATCGGACGCAATGTTGGCAAGAACACTC
TGCGAGACCTTTTTCTCCTCTTTTGTGTCTTTTTGTCAGGTTATGCCTTATAAGCAAGCA
ACGTAGTTATGTGTGTCTAGTTTTTTTTTTCTCGAGGGGAAGTTGTGTGTGTCTAGTTTA
CACACACATATCTACTCCCTCTGTTTCAAAATGTGATCTTTTAAAAGATTTCGTTACAGA
TTATATGCGAATGTACATAGACATACTTTAGCGTTTGGATTTATCCATTTTGTTCTGTAT
GTAATCTATAGTAAAATCTCTAAAAAGACATATATTTACAAATGGAGGGAGTAGGTTGTA
TTTGGGCTAAAAGGTTCGATTTGTCACTGTTTTCTACGCACATGTTTGTGTTTGACTTCT
CTAAGAAAATTTGGCATAACACAGCATTAAAAAAGAAGAAGAAAAAAACAGCAGCCTAGA
AACAAACGCAAAGAAAGTTTCCAGACAAGTCCAATTGTTGTTGGGACAAAAGAGAAAAAT
ACAATTTGGTTCCTGGTTGTATATGCATCTTATTTAAAGATTTTTCTTATTAATTAATTA
AAAAGTCAAAATAATTTCAAAGTATTTTTAGATTAAATTTGACTTTATATTGCATTAGTA
TATAAATTTTCACGAAAAAATCAACATTGATATCTAGGCAAAAAAGACAAAAATTATTGT
CTATTATAGGTCAATATTCACACTATTTTGACCAAAAAAATTGTCATTTTCGAAAAGAAG
TCAAAGTGTAAAAAAATATGAAATTTCTCTCACAAGTACAATGGAAGGTCATGTTTATTT
AAAAAGTATTTTTTTTTAAAATAATTACTAATTTATTTTTTCATACAAAATGTGTATGCA
CCCAGGTTCCAAAAGTTCTTGTCTGGACAAAAGGCTTGTCCTGACGACAGGCAACAGCGA
CAACAAGCAAGAGAAAAAGATTTCGACACTCAAAAAAAGGAAAGTCTGGTGTTGAACGAA
ACGGGCAACAATCAGGAGTGACGTCAGATTTAGATATGCTCTAACTAGGGCACATCTAAA
TGCCCCCTAAACAATCTAAATTCTTGTTTGCCTGAAAACAAATATATATACTAATTTAAG
ATGAAATTGTACTTGTTGGACATGTATAAGATATTAAGATGTACATATGGTACTTCCTCT
ATTCACTTCTGTAAGACGTTTTAGATAGCTGAAATTGAACTGTTTTTGACGTTGTCTTAA
ATGTCTAAAACGTTTTACAAAAGTGGATGGAGGGAGTAATATATGATGGTGCAATCCCTA
CCGCGCCCTCATCGACATTGTTCTTTGACCGGAGGGAGTAATATATGAGTAGTTCCTTTA
GGATACCAACTGTAGTATCAACATATGTCAATTGCTGCACAGCTTCCCTATCTGCTGTTT
ACTCTGATGTCATATGCAATCCCAATAAAATATTCAGGTTCTGAAATCTCTGGCTATCTG
AGTGTTGATGAATTAGCTGCTCCACAAGATACATCTCTCCCTAATAATAAAGCGAATACT
GTTTCTGGTCGTCCGTCGTGGCTTTTTTGTGAAAAAGTCCCTCCGTTTTCAAGCATTCAA
ACCGCAGTCCCTGATTAAGTGGATATGTGAAAAAACGTTTAAATTTACAAGAAAGCCCAT
GCATCTGTAAAATTTTCACTCGCGACCCTTTGTTTGATCTTATCCTCTTTCCAACCGCGT
CGGAGCACGAGAAGGTGAGGGGCGGCGTCCTTGTTTCATTTACAAGAATATTGAATGTTA
CAGCTTACATCCACCCCTTATATATTCTACATTTTCTGCACGAACCCTGTGCAGTAATGA
AGCCTGAATCTTGTGTGTGCAGACAACTCAAAATGTCAAATAATATATGTTCCAAAATCT
GAATAAATGATAGTTATGATGCATCCACAGCTATCTACAGGAGTTGTACAGATAATCAGC
CACTATACCTAACATGCATGTATAATTTAACTGTCTGATCTCGCTGTGGGACATGTAATA
CCTTGATTAAGAGTTCAGCAAGGGCGTGAGTTCTAGGCAACTCACTGAAATGTCTTCTTT
TTTTTAAGACAAGCACGCTTTATTCCACCAAACTATAGAGATTGTAACCTAGTAGTATTA
GAACAACAACATAGCTTGAATCAGCCCCAAAAGGCCAAACTGAACGAATATGCTGCTTTA
CACAACTCAATTCTCTCAACAAATGTTGCAAGTTCAGTTCACAAGTCACATATGCTGCAT
TACACAAACTGATGTAAAAGAAAATTTGCCTCCCATGTTTTAAGTTCAGTTCACAAGTCA
CATATGCTGCATTACACAAACTGATGTAAAAGAAAATTTGCCTCCCATGTTCTAAGTTGA
GCTCACAACTCACATTACACATACTGATGTAAAAGAAAATTTGCCTCCATGTTCTAAGTT
GAGCTCACAACTCAATTCTCTCAACAAATGAACCTGGCCACATTCTAATCAGATCTTGTG
AGAGGATCACATAGCACAGCACTAGATCTGTTCATTCATTGGCGCTAATGAGGAGGAACT
CCCCCTCGCATACTACATCACCACCCACATAAGCTTTTCCTTCCATCTTTGCAAGTCCGA
ACTTCTTCTGGTACTTGGTCAGGGTCATCCTCATGACCAAAGTGTCCCCGGCAATCACCG
GCTTCCTGAACCGCACCTTATCAACCCCTGCAAAATAGAAATTGTCCTGGGATCCGCCGA
CTTCAGGCTGCAGCATCACGATGCCTCCGACCTGGGCCATGGCCTCAACCATGAGAACCC
CGGGCATTATCGGCCGCTCCGGGAAGTGGCCGGGGAAGAAGTTGTCATTTATCGTGACAT
TCTTGATGGCGACGGCGTATTCCCCTGCCTTGTACTCGATCACCCTATCTACCAGGAGGA
AGGGGAACCTGTGGGGCAGGATCTCGCGGATCTGGTTGATGTCCATGATGGTGGGGAAGG
CGGCGAACCTTTTCTCGATGGGGAGCTCCGCCGCCGCCGCCGCCGCGCCGGCGGCCGGCG
CCCCACCGCGCGCGGCGG