morexGenes - Barley RNA-seq Database

Contig contig_1561348
Source Contig contig_1561348
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1561348 (9332 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_1561348

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_11560	9	2046 bp	MLOC_11560.1	Available	Available	LOC_Os11g07912.1, FRAME:+2, EVALUE:0.0, 13111.m00829 protein MLO domain containing protein, putative, expressed
CDS Structure of MLOC_11560

Contig Sequence (9332 bp)

>contig_1561348 9332 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCACACACACAAAGTAATCAAGATCTAAACACATGTAATGTGATGTTTCA
ATTGTATCTATTTTATGAGCATTTTTCTTTGTTTTTGTCCTCTAACTTTCATAGTTTGAA
TACAAAATTAGCCCAGACTAACGTTGTTTTCAGCAAGATTTGTAATGGTATTATTTTCTC
TGCGAAAAAGGTGCTCAAAATGGAAACATAAAGAAAATTATTTCGGGAGAAAAGTCGCAT
GAAGCCAGAAGGGGTGCTAGGGCCTGCGGGGCACTTGTGGGGCCCATACGTCCAGTTCAC
GTGCCCATCGTCTGGCGGCATGAAGAGGGCGCATGGGGCCCACACGTACCGGCCTTTGAC
ACCATTTGGCCTATATTTATCTCATGTTCCGAAAACCCCTACATTGAATTTAACAGATTT
TCTCTGCGACATGGAGCCGCCAAAACCTCTGTTCTTCTTCCAGGGGCAGCACCTCTGTTC
GTCTTCCAGGGGCAGCGAGGGTGATTCTTCGTTGTCGTCATCACCAGCTTCTCCATCATC
AACGTCAATGATCTCTCCACTCATGTGTTAAATTTCTCTGTAGGCACAAGGGGTGGATGA
AAATTGAACGAGAACACTTCTATAATAGTTGCCGGATTTGCTAGGGTTTGATGCCCAGTA
CACTGCATGCTTTGATATTGATATTGGTATGACTTTGATATGCTAGCTCAAAAGACGGGA
CACTTTAGAACCATTCTACAATCTAACTGCGATCGGGTAATCAGTGCTCTCTGTGACGGT
GGATTTTTGGCAACAACAAGTTCTTCAATAGTTCATGATTGTTACCCCGCAAAAAAAATC
ATCATTGTTACCCTGCAAAAAAATTAAAAAATTCATGATTGTTCGATGAGGGCAAGTGTT
TTCGATTAAGTGATCTTTGAGAATTGCCCAAAAAACCTAACAAGGTTGCTCATGAGATAG
CTAGATCAACACCTTTTCTTTCTGAATCCTACTTGGGTCAGGGAACCACTAGCTTCCTCT
TAACACTTCTTATGAACCATGTAACCTTGATGATTAATGAATAAAGTGTGCTAAATGGCT
TTCCGTAAAAAAATGAACAACTGTTTACGCTCTCGTACGTAATAAAATAAAAAAAACATC
GTCAATACAAAGCATAAACTTAGGCATAAATACCAACAACACAGATTTACTAGCTAAATC
CAGCCCCAAACATGGGTTTTATTGACTCAAAATGAAGCATCAAGAGGGCACAAACACAAT
GAGCATATACCAAGCCTCTGCAAACAACTTACACGGATGCACACACCCGCAAAGAATCAC
TCAGGCAAAGAGCAAAGTTATACAAGACATAAACTCCGCCTATGCGAAGGGGAAAAAACT
CTGAAACAATCAAAACTATGATCGACGAACTACAAAGAAAACGAGAAAGGTTCTTCAGCA
GCAACGCCTCTAAGAAGAAAACGATGTTGAAGTGCCGGATGCCCGGATCCAACCATCAAA
GGTAAAATCCCGGGTTTTCACCCTGAAGATAAAGTCCAAGCAATGCTTTAAAAAAAAGGT
AACGATGCAAAACACCGTCATTGCCCAAAACGCTCCTTTGCGCGTAGTTGTGAATTCTGA
AGATTTAGTACAACGTTATAAGTCAATACAAAGATGATAGTATCATCTTGAAGTGGAGGC
GTCCTATGGACACAACATTACTTTGCACAGAGTGGCCATGAGACATGAGGAGCAATCACT
TGCAGTTACACACATATATACTGGGTAATCCGCAGGTCCTTTTCTGCAGTTACTATGAAG
CTTAGGCAGGAATGGACACTGTTCTTCAAGTTCAGTAGAGTTTTAGCTGTGCATATTTAG
TCCGGTGAAGAACAGGGCTAATCTGAGTAACTAAGTGTGTCGGGTATCTTCCTCGATGTG
AGAGATCTCCTCCTCGTCATCGACAGTGATCGCGGTCAGTGCCTCGTCCAGGGACGATGC
CGACACAGTCCTTGACAGCGTGCACACCGTGTTGGTCTCGTGGTCGGTCTCATAGATGGT
CGTGTCGAGGGAGCAGACCGACCTCGACGTGAGTGTCCCGTTCCGCATGAAGAGCGGATT
GTGCCTCCTCTCTTTGATCCTCTTGCACCAGCTGTGGAGGGAGTCCCTCACGCTCTCGGA
GACCAGTGACTTCTTGAACTTGGAACCCATCTGCAAATTTCAACAAAGAAACAAGATAAG
TGAAAAGAAGACCAGCCTCGACATATTTCCTTCCTACCTTGTCGACTACAAACTGCATAA
AGAGGATATACTAAAAAAGCTTGATAATTAATGAGGGAAAAAAATATGGCCTACCAAGAA
AAGTATTCATCAGTACAGTAGGTTGACAGTCAATAATTCTGGCGAAATAAGTGGAGAATT
CACTAAGTGGCTCTCTTGATTCAAATTAGGTTTTATCATCCAAAAAATACCTGGGAGATA
ATCACGTTAAGAGGCAGCGTACTGTAGCTGCACCAAACTTGAACAAGCAACCTGCAGTGC
TCAGAGGGAATAAAAACAGCTGTATGAGTCCAGAGTCCAGGCGAATGCACTTCGTAAAGT
GTTTAATCCATATGATGGTGGGATTTTTCACTAGTCTACTACCAAAAATCAAACTTAATG
CAGTTCATGCATATAATTATATCTTCAGAATACAGATTTACTAAAGACATGTGATTCATA
AAGTAAATTGTCATAGACACACTGTTGTAAAAAATTGATATGTGGCAAGTTTCTCAAAAT
AATATGTCAAATGTATATTGAGATGCCAACATCTCTTCTAACTCGCAACATATTCTGATA
CGCAACTTACCCAGAAGCCAAGCGAATAACCACCATGTACTGGTTCTTCATGAAGCAAGA
ATTTGCACTCAGTTCCCACTGCACAGGATGAATGCAAAGTAGTAAACAACCAAAAGAAGC
AACAAAGAAATCCATTATATCCATTGGATTTATCATATATAAAGTGACGAGTCATGATAG
GTGATGATGTTCCCTTCTTTTGCCTTGCCTAGAAAGTTTTGCAACCACCATGCATTTAGC
ATTAATAGCCTAAGCTATGATATAGAATCAAAAAGATGTCATGAACCAGCATCTTCCTTA
CATCTCCTACAGTAATGCATGTTAATCCAACACAACATATAACTAATCACATAGTAAGGT
GATCCTCACCAGAGACCATAAGAATGTCGCCATCTCAAAGGCATTCTGGAAGCAAGGGTA
AATATTAGGATGTGGAAGATGTTCAAAGCATCACAACACAACATCATCTACATAGTAAGA
GAGTCAGAGACATTACCTGGAACGAGATGAACTGTATAAGCCACCACAGAACCCGAGGTT
TTCCAAACCAGAAGAGATCATCCCGCAGTTTCAGTTGCGTTCCGACATTTGTGGCTGTTG
CCTCAACAACCTCCAGTGCCAACTGAGCGATAACATGCTGCAGCTCAGTGCCCACAAGCA
GGACGAGCTTTGAACATTTTGAATATGTGTAATTAGGCCAGGACATAAATACCATTTTCA
GATAAAAAAAGGGAAAAACAATTAACTGCGATGAGCGCGTTGGTTCAGAAATATGGGTGA
TACTTTTTCTTTGAGTTGGGGTGATACTTACAATGACAGGGGCAAATGATAGCCAGAAAT
ATATATTAAGACCTGCAATTAGTGAAACGTGGCAGGCCTAATGAGGACTAAAATAGACAA
CCAGATCTCTATGTTTGTATGAGAAAGTAAGGAGGTAATACCATGAACATTCACAAAGAT
GCATATTATTGCATAAACCCAAAGTGGCCAACTGTACAGCAAATGGGTGTTAGCACACAC
AAGAGAGAGCATAATATATTTATAAATCCTATGCAAACCACAAGCAAGTATCATATTATA
ATCAAAATCCAAGAAGGATAAATGCTAAGATTTCTTCATCTGTTAAGTTTGTTTGATCTT
TATGTGTAAGCACTTATATGATCAATGAAAAACAGATAATCTCAATGTTATGTTTTACCT
GATACCAACACTTCCATTGTAATCATCTTCCATGCTCCGTACCATGTATTTGTGGAAGTC
GTACGAATGCGGCAACTTATGATACTGATAAAGAAAATTAAAAATGCATTTAAGAAATGG
ATTATCACCAGGATTATAGTAGACAAGATCAAATAGAGGGATGAAGAGCACTTACCGTGA
TAAAGCCCAACCTTAATGCCATATAATCTGATTTTTTAATAGAACCCTTAAACTGGCGCA
GAAAGCACAGCTGCAACATTTGGTTACTAGCTCAGATTAGAAATGTCAAAAAATAAAATC
CATCGATCACAAAAGACATCATGTATCAATAAGCTATATGACGCAAAGCTTTTGCGGCCG
GAAAAAGTCGACATGTCGTCACAGAGAGCAAGTGTAGTTGGATACATATGGACATATTAC
CTATTTAAATAGCTACAATAGTACAGATACATGATTCATTTACACTTTTAGTCCAATAAT
ATTATTGGACTCTGTTCAATATCTATAAGTAAAGGTGAAAAGACTAAATTAACTGGGCAA
ATAAAGCAGGAAAGTTATAACTGTTAAGTCATTACTAACTGAAAAACTCACAAGGAAAAT
ATGCAATAAGAATCAGGGCAACCACAACACTGTTCTTGAAGCAACAGCGAACTTACCATC
CAGAGAAGTATTTTACTTTTGCTCCATGGGTGAGATGCATGATGAAAAACAAAGGTAGAT
TGCCTTCGCATAACCTTTCTCCTAGCTGAGAGGGAAAAACTTCTCAGGTAGAACAAAACA
TCATTATTAAGTGAATGTATCACTAGTACTACTATATGACCTAACGAGCATCCAATTTCA
CTTGACCTTACGTTGCAACTGCTCCCTTGAGAGTGTACATGCTTGAGTTTCCCACTTCCT
CCAGCTATATATCTGTAACAATCACCAAAAGAAGCATATTGGGCACTTCGAGACTGTGTT
GCTACATCAGATACTGAAATCAGTAACAAGTAAGGAAGACATACCTTAATCATTGAGAGA
ACCACTGTCACAAAACTGTAAAGCACATGAGTAAAACCAAGAATAAACAGAAAGCGATGC
AGCTGCTCAAGACCCTCATATGAAACAAAAGGTTCATGACCCTGCAAGCAGAGAAAGCGA
CAACAAGATGATTTATCTCATATGAAACAAAAGGTTTGATGGGAGATAGTCGATTCTGAC
ATTTACCTCATCACAAACATGCATCGACTGGCCACCAACTAGGATTCTAGCAATGTGGGT
GTTGTTAGCGGTGTGCTCTCCATGTTGATCCAGATCGTCGAAATCCTTCTCTGTGCACAT
ATAAAATTTGCTGGTGAAGAGCGTCGATGGCACGCAGATCTCCGATATCCACCTGGCTGT
CTGGCTCAGCAGCAGTGATATCACACCGAGCAGCATCAGTTCTGCAAGTGAGACATGGTT
CCCTCATTGAGGCGAAAATTCAAACACCTTACAAGCAAGAACAACAGTAGCACAAGAAAA
GTCCCTTTTAAAAGGTTGGTCAATCACTATGCTATAAGGTTTCATCAAGGTATGGAACCA
CATCTACAGTGGGAGTCCCTATCTACTTTCGATTCCCGTCTTATAAAGTGATGAAACTAC
AAATCGTGACGACCTTGGAGTGAACATGGTTATTATTTGTAAACAGTAAAAACCGCGTTA
AGATTAACGGCTTAAAGATAGTCAAACTGAGGTAGGCGACAAATTTCCAGAGTTTCTATC
GTGGGGTGCCACCTTCGCGGATCTTCTCGAGTGCGGCGAGCATGGCCTTCCGCTTCGTCT
TCCGCAGCCACTGCGCATCAACCAATGAAAAGATCAGCTACGCGTGCCAGCTTCCACTAA
GCAAGCTGCCGGACGAAGGTTACCTTGGCGAGGCGTGAGAGAGAGCGCTCGATGAGGAAG
CATGTGGCCACCATGAGCGTGGTGACCGTGGCCACCGACCACGTCGGCGTCTCCGCCAGC
GACCTCCCCTCCTCCTCCATCCGCCTCCACCGCTCTTCCTTCTTCACGCCTGCCGCGATG
TGCAGCTAGCTCCGACGCCTCCACCGCATTGACAAGGAGGAGGCGGCGGCACCGGAAGAG
GGAGTAGTTAATGCGGATCGAGGGAGGAGGAGGTGGGCGCGGTCGGCGCCGGATCGGAGG
AAGCAGCACGTGAAGGGCCGAACACAGAATCTGGAAATGGAGCCGCTAAGTTTGACTTCG
AGAATGAAACTGGAATGGCCGAATTCGGTAAAAAATACCCAGCTTTTTTGCTCGGATTGG
CATTAACCTGAACGAGCTGCCCCTGGTCAGTACGAGCTGGATTGGGTGGGAGCAGTTACT
GATTGAAGAATTGCTTTCGGGTTTAACGAATTTGGGGGGTTAGCTAGAGCCTAGAGCTAA
TAGCTGGTGGTGAGTGAATGAGCAAGGTACCGATACAGTGAAGGGTGGTCGAGCAGTGGC
ACATGTGCAACGTCGCTGATGTGATGTTTGTCTTAATGGATTCTAGAAGATTAGCAATGT
TGCTGACACAACGAAGTTGGGCAGATAAAGCGGCACGGATAACCAAACCGTCCGTAAATA
TTTAGACCAAACACTTTTAGACTCATCTTAAATGTTTAAGATGATTTGAACCTCTGGCGT
CTCCTAAACCGGTACTAAACCGAGAGGAGATTTGAGTGAGTCTAAACGTCCGTTGCGTTG
GACCGAGATCCAAGCCCTATCCAAAACCGAGACGAAGCTCGCGCATTCTGACAATCATGT
CACTCTTTTCATGCGAAAGTCCATCCCTCTCCCTATCTCTGCCCACACCCTCCATCATGT
CATTCCTCCATCCATCGTCATAAAAGAACCGCCAAAGAAGCTAAAGACAATGTTCGTTCT
CTGCAGGACCTAAACCCGGAGGAGGTTGCCCTCAAGGTCATGCCCCCCGAGTGCTAAGGA
AGGCGAAGAAGAAGGCAATAGAGACCGTTCAGGCTGTAACTCATCATCCAAAGCACACCG
TCGGACCAGTGTCACCAGATCAATCGTAGTTATGGTGTGCCTAGGTGAAGTTGTCCTACT
ACTACACCACTGTACGCTTGGCGCGCAGCAATCGCCGCAACAGCCAACGGCCTCCTTCAC
CTCCGGCCATCGAGCGTCGTTCACCGTCAAACTCAACAACGACCACTTCGTCATGGAGCA
GCCGACGCTTTTCGGTCACTAATTTCCGCTATAGAGCTCACGTTCGTCGGTGCTAGATTA
TTGTTTGTTGGAATGCCTCAACCAAGCACGATGGCGGAAAAACGACGAGGCAATGATGAA
CATTATCCATGACAAAGACGGATACGAAGACGGACGAGTGGATGACTCCCAGTTGGAGTA
AAATCCAGCTAGAGGACACCCAGCTGACACACACCCATCTGGCGTACAGTAAGCAGTCGC
ATTTTTAGGAAATCGTCTACTCGAACAAGGAGGATGATTTCACCTGTGAGGAAGAGTTGG
CCGCTAGTGCGTATTCGTTTCATGGCATGAAGCAAAAGGGTACGACATTTTGGTAAAGTT
TGCATGATTGACTTCATGAGCAAAAGTGATACAATCCCTATTGCGGGAAAGTGGTCCATG
GTCACAATCCAAAGTCACTAGCCAAGCGATGCTACATCATTCAAGAGGATGTCAACAAGT
TTTGCAGCTCATGCCAACAAGTGTGAAACCAATGCCCAAGTGGCACATCACTCCTCAAGC
TCGTAAGTTTTGTGGCTTGATTCTCTATATGTTGGTCATTTGGTTGATTTGTTCAATGCT
GCAACTTGTTAACCATTTTATTGTCTTCCTTTGGTAGCCCGCATGTGGATGGATGTTGTA
CCAAAAGACGGAAATAAGCACTTCATATTTATACATTCTTGGGTGAAATTAAATGAGCAA
AGCAAGTGACCCGCCTTCATTGCCAATTCCCTCAATACCACCATGGCCAATGAAGATGAA
TGTGGTGATCCAACAAAAGAAGGGCTTGATCTAGCCACTCATGTGCCTAGAAACTAGCTT
AGGAAGTGGGAGATGGAGGAGGAGAAGCAAGAAGGGAGGGGGCGCACAAGATGACGGAGA
ATGCCAAGAAGGAGGAGGCATGTGCCAAGCTGAAAGTGCAATCATTCCCTTAATCATATT
TTGATGTTGATGAAAACATATATCTTAGGTTTTAGTCCCCAAGGAATTATGTGTGGATCA
TGACTACATAAGTGTGTATTGCTCAAGAGCGAGGAAACAAGACAAATATCTTAGACTTTA
CAGTTTATTCTTGAGTATAGGGATCCTGCACTATTAAGAGGGGACCATTGGGACTTTTGA
ATGATTTTCTCAAAAACACGGTTGCTTCAAAAACATTTCTCTCGTTATTCATCTTTTGTC
ACTCATACACCCACAAATTACTACTAGGCACTTCACCATGTGACCCACTAGTCATTCCCG
AGGATGAGCTCTTTTTGTATCTGTCTCATCGGGCGATCGGTATCTACCGGACGTATGGTC
ACTCATTGCTCTTCGGACGTCTAGTACCTACCAAAAATCCAGTGCATCTCAATAGATTGA
AACTATTGAATTTCTGGTCCGCACCGGAAATCCACTCTATCATGTGCATAGCCAACTTGT
TGGACGCCTGATCCTCATTATACGTCATGTCTTCCTATGCCATCGGACGTGCGACAACGC
CCAAAAATATGGTGTGAACCAACAAAGTAAAGATGGATGGTACTCACCCCAGGTTCGGTG
CCTTCCAAGACACGGATGACCGGCAAGTACGAGTCGTCCGACAAATCCTCCTTAGCCATT
TGCACTACACTTATCCATCAACTCGGGACAGCCACTGGATGAACGGTGATTCCATCGGAT
GTCCCGTGCTTGTTTTGACACCGGACGTCCGGTAACCCACGAGTCGCCCGGCATATTTAC
AACATAAGTTGTTCCAATAGGAAAATTTGAGTTGGACTATAAATACCCCTCTACCACTGC
GACAGAGGGTTGACCATTCACTTTGAATCAACCTTAGAACACACGCTACTCTCTGATACG
TCTTCGACGTATCTATAATTTTTTATTGTNNNNNNNNNTTATATTATCAATCTTGGATGC
TTTACATGCAATTATATGCTATTTTATATCATTTTTTGGGACTAACCTAGTAATCGAGTA
TCCAATGCAATTTTCCTTTTTTGCGTGGTTGAAAGGACGTGCATGTCGTCTAGAGGAGGG
GGAATGGGTGCTTTAAAATAATTATGGTTTAGNNNTGAACAAATGTGGAATAAAACTAAC
ATTTAATTAGTCAGGCACAAAACCTAAAACAA