| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1561347
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_11559 |
3 |
2038 bp |
AK369050 |
Not available |
Available |
None |
CDS Structure of MLOC_11559
Contig Sequence (5543 bp)
>contig_1561347 5543 assembly3_WGSMorex_rbca.fasta
ACAATTCACGGTATATAGAAATAATCATACAGCTTCGAGATGCGTCTTGTAGTAGAGGAA
AGTACGACAAAATCATTAAATAAATAAAACACTGATAATAAGTCTACAAAACCACGTACA
AACCTGTAGCAGGTCATCTCGGACAGTATATATAGGAAGATATTGTCTTTGCTGAGAAAG
AGATTTAGATTTTGCAAAATCACTGACAGCTTCTGCTTTTTCCTTCAAGTGTTGCGAAAA
CTTCGCTTCCTCCTTGAAATCAATCTCCCCTTGATCACCAACAACAGCAGTATCTGCATC
GACCTGATTTTGCGGAAGTGAGTAGAACATATGGACAAGTCACAACACTTGACATGCAAA
GAAAATGTGGCAACAGTTTACCTGTTCAGTCGTTTTCTCAACACCCAATATATTTCCAAG
ATTAGATCCAGCAAGCTCCCAGAAGCGTTGCCGCGACTTGTTCTGGCTCTGCTTTTCGCG
AATTTCCCTAACCAAAACAGAACCCTTTCGTGCAATGATAGCCATGTCAGATGTTGGATC
CTTCAGTGGCATTACAGGCTCTGCTTGCTTTGTGTATACAACTCGCCCATCCAGGAACGG
AGGTTTCGTATCTGCCAAAAATTAAGCCATCGACAGGTTTTAAGTTCAAGTACATGGATG
TGCTGTAAACAAGCAGAAAAAATTGTTATCAAGAAAAAAACATCAAGGGCTTGCCAGGGC
CAAGCCCTATTCACTTCAAACCTAGCTACTATGTACTCCCTCCAGCTGGAATTACTTGTC
ACAAAAATGGATATAAATGGGGATGTATTTAGAACTAAAATACATCTAGATACATCAATT
CCTATGACAAGTAAATCCGGACGGAGGGAGTATTATGTAAAACAAAGAAACATAGAAGAA
TCATAAATATATGTTTCAAATTGACATATAAAGGATGGAAAGATGTGAGCAGTTTGATGC
TTGCTGTCATATAGAAGCTTTTGAGAGTGAATGATCAGAAAAGATCACAGGTTCACACTG
AACACTCATGTCAGTCAGCGCATATACCAGCAAATGGAGATGGGAGTACTTAGCCAGCAC
ATATACCAGCGAATCGAGATTGGACCCCTTAGCCAGCACATAAACCAACGAATGGAGATG
GGAAAGCAGACAAATAGCTATCAGCATTGTGCTGGTTAGTTTATATTACAAACATATTTG
ATGTTTCTCATCACTTCACACGAAGGAATAATCCTTGAAACTCTAATTCATGAGAAATGG
GGGGATGGTTTCACAAAAGGTTGGTGTGCTACTTGTTTTAGACGCAACTAACACAGCAAG
CAGAATATCATCAAAAAGAATTTCTGACAGGGAAAGAACATACCATGAACAAGAAGTATT
ACTTTACGCTCATCCTCATCATCAAATTCTGTCTGCACCTCCGTTCCTCTAACAGCTCCA
GACCTCAACAATTGTCTGTCCTCCCACTGAGCATTATCAGCAGTCATCTGTGATAATTTC
TTGCTCTGAGAAAGGGTCATCAGACTACCATCTTTACGAGTCTGCAACCAATAAAAATAG
TTTAAAAAACAGAATGTTAAATCGACAAGTAAATGTAAACTATCATATTCGCTGAAATGT
AGTTGAAATATGTGAATGTGATACTCCTGAATTAGCATCCTAATTTTTTATGTACACTAA
TCCATACATGTTTGACCGTCACAAAAGGTGTTACATGAATCTTATAATATAAGATTAACT
TAATTATGTCCAGCCCACCAGAATCCGGAACTTAACAGAGGAAAATATTACAAACAGATG
ACCAGGGCAAATAAAAGCATATATCTAACGTGATATCTCTCTACTTGACTTCTTACAATG
CATTTTGACATGTAGAGGATATCAGGTGGTTAATTACAGGAAAACTGAAGCCACAATACA
TGACACTTTACTAGAACAAATTCCTGCTAGAAGATAAAGTACTAGACCCTACATGCAGTC
ATTTACCATATACACTGACATAGTTCTCTACTATGTGGTTGCAATAATATGTGCTGCTCC
TACTCCTATAAATAGAGCTGGTGAATGTTAGAATGAAGTACTTCAAAGTGTGATTATTAA
ACATTTAAAAAAATTACCAATTTTTTAGGCAATTGTGCTTCCTTCTTTTTGTAGGAACTA
TCATCTGCAGCATAATTATCACCATCAAACACGGTGTTGTGTTCTTCACAATCATACCTG
AAGAATTTGTGAAGGTTAGAAGAATGACTAGCTAAACTTGATTTTCTGGCGATATAAGAA
TGTTGAGTTGCTATTCATTTATAAACACTAGGATGTAACCGATTTCTAAAAGGATAAGTA
CCAAGCACGGTCAGCATTATAATCCATCTCTTGCATCATTTCCTCGGTAATCTCATAATT
CCTATCAGCAGCTGAGAGGCTTCTATCAGCTTCAGCATCCTGAAATAAGAGGGTAATGGT
TATAGGTACAATGACCATGGATCGAAGAAACAAAATCAGAGTTTAGAAGAAATTATAAAG
TGATCCGAGAAGAATCATGACTTACATTTGAAAAGGTGAGCTGATGAGATCTTCCACTGG
AACTTGAATACGAAGACCCTTTTGATGAACCTGAAGCCCTCACAGGAGCAGGCGAGGGAG
AAACATGATCCCAAGGGGATACTGGACATTTATAAAAGAACAAAGATAATATGGGTATAA
GTTATAGTCAGGTCACCGAGATATGAAGTACTCCCTCCATTCACAAATGTAAGGTGTTTT
AACTTATTTTCTGAATCGAATGTATATAGACATGTTTTAGTGTGTTCGTTTACTCATTTC
AGTGAGTATGTAGTCCATATTGAAATATCCAAAACATCTTATATTTTTCAACAGAGGGAG
TAACATATTTACTTTCACAGAAACAAAGTTAAATATCACAGAAGATAGAGCTGAACTGTC
TTTACCTGCGTAACGGGGTGTATGCCCGCCTAGCCAAGGAGAAACCAATCGTGCATCAGG
AGATGCAGCAGCCAGCATAGGAGATCGTGTTGGATGATATCTTTGGGAGCCAGGACGATC
ATCACGGTACTCGCGGCGAGGTGTGTCTTCCCATTCCCATCGGCCACTGTCCCAATCAGA
TCTTGCTGTAATTGCAACCACACTCCTGTCAGCTTGCATGTTAAGCCAGTCGAGAACCAA
AACATGGCAAAGAATACTATACCAACAAAATACCAGGTGTTCTTGAGCTTCTCGAGCTAT
AATCATCCCGACTTCTTTTGTTTGTGTAGTCAATAGATGTAGATCTGCTCCGTTCATTAC
GCCTACTATTTGATTCCCTGTCATCACGGTATCCTCGCTTTCCACTGCTACTATAACCAA
TGGATGCAGATGTCTCCCGTTCACCATGTTTGTCACGGGATCCTCTGTCATCATTGGGTT
CGTACCTAGAGGCGTGGGTCTGTAAGCAAGAAGCAAATAAATGTTGAATTGCTGACTATG
TTAGTAAGGTGAATACAAAGTGATGAAAATTCTAGACAGAGTAAGTCCTAAACCAAGAGA
GAATGTTGTTATTACTGACTTGTTGCCGATGGGATTCATCTCGATGTCTGGGTGTAAGAC
CCCTTTCATTCTCATCAGTGACTGTAGATTCTGAAACAGAGTATAAAGCTTTAGTTTGAC
TAAGACACGTCACTGAAAATGAATAGTCAGCATACAGCCATATAACACAGTAGGAGCATA
TACTAGTATCTTAGTAGATATTTTACACCAAAGCTGGAAATATGGTCAACGGATCAAGAG
AAGAAGAGGCACCTTTCGACGATGTTTTCTCACTGGAATTGGTTCCTCGATAACGACGAG
CCACGCTGCCACGGTCACCACCGGACAGGCTGCTTGCATCATTATCTGTAGATCCTGGCC
TCTCATCTTCATCCATAGAAGAAGCAGCCGTCACTACCTTCTCAGGAGGCCGCTTAAATG
AATTGGTACCATCCTTTTCTCTTTTCTTGTGTGCGAGCAGGTCCAAACCTGCAAGACAGA
CTAGTGATTAGCTCACTTTAAATCTCTAAACTCCTGGCATGGCTACAAGTGCTAAATACG
AAGTGGGATCAGCTCAGTAAGTCTACAAATCGCAAGTAGCGCCGAGTTAAACTACTACTC
GAATTTAACGGTTAGAAGATATACGGCCCAAGTATATCATACCTAGTGCAGATTTCCCCG
GTGGAGGCCGATACATGACCTTATCCTTGATGGGCAGTATCAGACCCTGCGCCGTGTCAT
CTTCCGGCCCGAGGGTGCTTGTGGTCGCGTCGAGGTCAAGCCTCCCGTCGGAACTCATCG
TGGGGAGGCGTCGTTGGAGCCGGAGAGGGAGGTGGCCGGGGTGAGGACTGAGCACGTTGG
CTCAATAGCGAGGTAGCGCCAGTAGACGCGTCGGGAGGGCGGCAGTGTCTCGCTCGCCGG
AGTTGGGGGCGGCTGTCCGGTGGAGGAGCTGCGGCGGCGGGATAGAGAGGAGGAGGCGCC
GGCTTGGGGAATCAGAGTTATGAAGAGCCAAAGAAGGCGTACGGGACGGGTTGGGTCGGT
TCGGGGCACTCAAGTCTCGAGGCGGTATGGGTCGAGCAGGTGGACTTCGTGCTCGGCTCG
GGCACGGAGTGGCATATTGACCGCGAGTTCCGGAGAAAGGGGATCTCCAATCTCTACTAC
CTAATCTTTCACTCTCGTAGGAGCATAGTTAATACGTACTGTATGATATTATCACGTCAT
GTATAGTCATCATTTATAATCATTTACTCCCTCCATAAACTAATATAAGAGCATTTAGAA
TATTACTTTAGTAATCTAAATACTCTAATATTAGTTTAGAGAGGGAGTACATAATAACCT
TAGCTATAAGGTTGGTTATGAGAGTATTATTTTTTTAATTTTTTTCTGTCTCTTTCTTCA
TATTTAATGCATTTGCCAGAAGTAACCATATAGCTAGGCTCTTGTATAAGAGCTCACTCC
TATCATTTTTTAGTCTCTCTTCTTCGCATAGACAAAAGTGCATGGTCATGGTGGTGAAAT
GGACTGATTCTTTTCATCAATCCCGCAGAGCCTCTTCCTCCCTTCCTCGTGTTCCCTTTG
CGCTCCCCGCTGGCGGCCACTCCGGCCCCGACGGTCACCCCTCCCGCGCATGTGACCACT
CGGTCCCGGCGCCCACGCTCTCATCGTCGCTACCATGGTATCTGGTTCGGCTAGCCCGAA
GTCGGTCTCCTCACGACAGCAGCCGGTGGTCTCGGGGCTAGGCCTCTCTAGCTCTGATGG
ATCTGCGAGCTCCTCGTCTAGGGCCGCTGGAGGTGGCGAGGTGGTGTTAGAGCATATATC
TCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATTTGTCCATAGGCACTTCTTGAGGTTCATCTGTTGGGTTTAAGGAGTTT
ATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAATGGTCATAGAGACACTAGG
TAGATCAAGATCTCAGACAAAGA
