Contig Data
morexGenes
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Map Locations of contig_1561324 (5270 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1561324

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11548 3 2367 bp AK248526.1 Available Available None
MLOC_11549 1 882 bp MLOC_11549.1 Available Available None





CDS Structure of MLOC_11548






CDS Structure of MLOC_11549






Contig Sequence (5270 bp)

>contig_1561324 5270 assembly3_WGSMorex_rbca.fasta
CCCCCCCCGCGTGATCCGAGTCTTGTTACGGCGAATCCCCTCCGGCCGGAAATGAAGTTT
GATGGCGATTCCACCTCCTCCGCCCTCTGGAGGAGTTTTGTTGGTGCGTGTGTTTCGCAT
GGGCACGGCGAGATCATGCGATTTCGGTTCTGGTCTCGTGTGACTTAGGCATTAGTCGGC
AACTTGTTATCGCGATTGCAACTACAGTATTTAGGGTACGCTGTAAAGCATCTTTTCCTT
CCTTAACCCTGCCAACATATGGATTTCCTTCTAAAACCTTGTTTTTGAGCTTATTCAATA
ATACATCGATTGATGCAATGGTCGGAGGCTTCGTTCCTCATTTAAAAAAAAACATATGGA
GTTGCTTAGTTTTGAGATCGATATCCTGCTTCTGCCTTAGTATCGGTATCGCAGTGCTCG
TTTGCGTCACTCTGTTTCGTGACGTTGACGTTTCTTCGTCGTCTTCTCCATTCAAACACA
TGAATGATGACAATTTCCTTGTGTGCAATCAACCAACAGCGGGCACTCGCTGCTGAGGGA
CCCCCGGCATAACAAGGGGCTGGCCTTCTCCGAGGCGGAGCGCGACGCGCACTACCTCCG
GGGCCTCCTCCCCCCGGCCATCGTCTCCCAGGAGCACCAGGAGAAGAAGATCATGCACAA
CCTCCGCCAGTACACCGTGCCCCTCCAGCGCTACATCGCCATGATGGACCTCCAGGAGAG
GAACGAGAGGCTCTTCTACAAGCTCCTCATCGACAACGTCGAGGAGCTGCTCCCCGTCGT
GTACACGCCCGTCGTCGGCGAGGCCTGCCAGAAGTACGGCAGCATCTACCGCCGCCCGCA
GGGGCTCTACATCAGCCTCAAGGACAAGTGCGTCTCGTTGTCTTCCCTCTCTTCCCTACT
CTCTCTAGCGCGCCGTGCATTTCTCTCTGTTCAAGACCCGAGTACATGTCTGACATGTCA
AGCACTTTTCAGGGGCAAGGTGCTTGAGGTGCTCAAGAACTGGCCTGAGAGGAGCATCCA
GGTCATCGTCGTCACCGACGGCGAGCGCATTTTGGGCCTCGGAGATCTGGGTTGCCAGGT
ACTGCATAAATATGATCGATGATGATCCACCACCAACCTTTATATGATTCTGAATGCTCA
TGCATGTTGTGATGATCTTGTGCAGGGTATGGGGATTCCGGTTGGCAAGCTGTCTCTGTA
CACCGCCCTCGGAGGAGTTCGCCCATCAGCTGTAAGTGTGGCTCTGAATGTTCTGAAAGC
ACGCAAGGATCAAAACCAGTGGATCGTTCTGCTGACCGATTTATTATATTAATAATGCAA
CGATCGTGGTGCAGTGCCTGCCAATTACGATCGATGTTGGCACCAACAACGAGACATTGC
TCAACGACGAGTACTACATCGGGCTCCGTCAACGGCGTGCTACCGGCGACGAATACCATG
AGCTTCTTCAAGAGTTCATGACCGCAGTCAAGCAAAACTACGGCGAGAAAGTCCTGGTCC
AGTTTGAGGACTTTGCCAACCACAATGCATTCGATTTGCTCGCAAAGTACAGCAAGAGCC
ATCTCGTCTTCAATGATGATATCCAGGTGCTTCATTCATTCCCACACTGTTCCTACCAAG
CAGTGGTCTGGTCACCACGAGGTGAACCATTTGGTTATTTTTATTGTCTTTTATCTTCAG
AGTTACTGAACGGGAAATGGTGATATTGCAGGGCACAGCATCAGTGGTCCTCGCAGGCCT
CTTGGCGGCGCTCAAGGTGATCGGTGGAGGCCTTGTGGATCAGACTTACCTCTTTCTTGG
TGCTGGAGAGGCTGGAACTGGCATTGCAGAACTCATTGCGCTTGAGATGTCCAAACACGT
AAGACAGCAAGCTCTGCATTGTTTATGGATCAGTCGGTCGATGGTGTATTACTACCTATC
ACTGACATCGAGTTGCTGTTTTTACAGACTGATCTCCCTGTCGACGACTGCCGCAAGAAG
ATCTGGCTGGTGGACTCGAAGGTTGGTTGCTCATCTCATCCCAGAAACCATGCATGCATC
TAGATTTTTTTCTCTGACACGTAGGGCTCTGTGTCGTGGTATTGTGCAGGGTCTGCTTGT
GGAGTCTAGAAAAGAGTCTCTGCAGCACTTCAAGAAGCCGTTCGCTCATGAGCATGAAGA
ACTGAAGACCCTGCTGGAGGCCGTCCAGTCCATCAAGCCAACCGTGCTGATCGGAACATC
TGGCGTCGGGAAGACCTTCACCCAAGAAGTGATCGAGGCCATGGCCTCCTTCAACGAGGT
AGGACGCAGACCTGTCAGCTCGATTTATTGCTTCATTTGAGGTGCAGGAACGCTAAACAG
AGGCCGTGTGAAAAATGCAGAAACCTGTCATCTTCTCGCTGTCGAACCCGACGTCGCACT
CGGAGTGCACGGCCGAGGAAGCCTACACCTGGAGCAAGGGCACCGCCGTGTTCGCGAGCG
GGAGCCCGTTCGACCCCGTGGAGTACGAGGGGAAGACGTACGTGCCCGGGCAGTCCAACA
ACGCCTACGTGTTCCCCGGGTTCGGGCTCGGCGTCGTCATCTCCGGCGCCATCCGCGTCC
ACGACGACATGCTCCTCGCCGCCTGTAAGTATCTGCATCTCCTCGCACGCGTTTGCGGTG
GATGGTGATTGAATCTGAATCTGATGGTGAATGGTGTTTGGTTGGGTGCAGCGGAGGCGC
TGGCGGAGCAGGTGACCCAGGAGAACTTCGACAAGGGGCTCATCTTCCCGCCCTTCACCA
ACATCCGCAAGATCTCGGCCAACATCGCCGCCAAGGTGGCCGCAAAGGCCTATGACCTGG
GCCTGGCGAGCCGGCTGCCGCGGCCCGACGACTTGGTCAAGTACGCCGAGAGCTGCATGT
ACACCCCGCTCTACCGCAGCTACAGGTGAGCGTGGCGGCAGCCTTGCGGTGCGGCGAGGA
CGGAGCCAACCAATAAAATCAAATTCCCCTCCCCATATGCCAGCTCAAGCTTCACCGACG
CAACCTAAAACATAGGCTTGTTTTCTTCTGTGTCCGTCTATGCGTATGTATACTCTTGTG
GTGTTCTACTTTACTCTACTCTACTCTACTCTACTCTACTCTACTGTTTACGGGAGCACG
GCATGCGCCTGTCTATCTGTGTCGAGGATCGATTCTTTTGTCAGATTTTGAGTTAAACGA
GTGTAATAGTTTGATGATTTGTGTCACCAGGATTGCTCATTCAGTTCTCACGCTCGACGA
ATTGTTTGATGTTTTTTTTTGAAAAGTTGTTTGATGTGTTTGGTCCTCTTTCAAACATGC
ATCAAACATGTTTCTGTTGCGTCAACAATTCGTCGCTGGTGAACATCCATCAAACATGTG
TTGGTCCTCTCTCAAGGCCCGGCTCCAAGATTTGAGCAACCGCTCGCCTGTCCGTTAAGT
TTTTTTTAGGCCTTGTTTAAAACCACAATAGATTATGATAATCTGGATTACGAAGGTAGA
TTATATAATCTGGTTTATAAAAATAATTCAGGTGGACATGTTTGGAGGCCAAATTATATA
AACTGTAATCCAGGTTTTATATTGCATAATGATCGGTCTGTCCTCTGTTCTTTTTTAAAA
TAGGAGGGTGGCGGTGGTAGAAATGTCTTCAACTTTACAAGGGTAATGGATCATTAGCAA
ACCATAATCTGATTTTAGCTGTTGTAGAGTAGATTATGAGTTTTTAATAATCTGTCCATT
TAGTTTTTATAATTTGCACCATAATCTGTCTTGTTCGAAGACAGAATAGATTATAAAAAC
TGAATTATATAATCTGAGTGATTCTAAACAGGGCCTTAGTGTAATTTTCATCACATTACG
GAACTTTCTAATTTTCCCAAACTGCCCTCCACCGCTTGCCCACTCACACTCGAACCCATC
GCTCGCTCTCCAGAAGCTCCCTCCCTCTCCCTGTCGCTCTCTTCCTCTCAGATCAGCTCG
TCGGTGGCCTCTCTCTCTTGACGTCGGGCTCCCGTGTGCCTCTCCCTCTTGACGTTGCAG
TCCTCTTCCACCACCCACTTTCTCCCCATCACCCCGCAACTCAATCTATGATGTGTGTGT
CCGTCGGTGAAAAGATCGTTTTTTTTGCACCGTTGATGAGCTTCTACGCGACGGAGGCGT
GCGTCGATGTTGTGTGTGCGATGGAGGCGTTGGATGTGGAGCGACGGACCTAGAGCACAG
ACCAAGCGTTGGATCTAGAGCGACGGTGGAGCAGCGGAGCAACGAAGCGCTGGAGCGATG
GAGCAGCGGAGCACCTGACGGTAGCGCGACCCCTGCCCCGCCACGCCACGGCGGCAGGTC
ATCGTCGTCCGCATGGTAATATCCTCGTCTTCTCATCAAGCTTCAGTAGCTGTAGCACTA
AGTTGCACTAATTTGGAGTAGCAGTAGTTGTAGCACCGACTTACACTAATTTTGAGTAGT
TGCAGTAAATCATGGATTAATCCAATGTGCAGAAATTTACTGATTTGGAGTAGTTCTAGC
TTGATGTAGTAGGCCTGCTTCTTTGATCTGCAGTTTGGAAGGAGATTGATAGAGACACAC
CAGTGTTCTGTCTCACCTGCTGCATTGTTTTGATCACAACTTGCCCGGGGGAAACAATCT
CAAGGAATGAGGCTCTCGAAACCGAGTGAGACTCCGACAATTAGTCACCGATCAAGAAAC
AGGGCGACCGAAGCAAGAGAAGCGCCAAATCATCAGATTCAAGGCAAATAAGAAGGTATA
CAGAGATCAAGCATGTATCTTGTTGAACTTTTGTAGCTTAGTCATGAACATTGTTTGAGT
TTCTGTAGTCATGAACATGCTGCTTTCATGGTTTGGATGTGCATCTTGTTGAACTTGCAA
TTTCAGGAGTTAAATGTGTAGTTTTTGTTAGTCATGAACATTTGTTAATCTTGCAGTTCC
CTTGCTAGTCATGAATGTTCATTGCTTCGGTGAGGGAACTTCTGTATCTTAGTCATGTTA
ATCTTATGAAAATTGTCCAACTTCTTAAGAGAGGAGTAGTTTTTATAAAATTGTCTTAGA
AATGAATGTGTAGCTTCTCTAGCTGAAAATATCCAGTGATTCACTGAAGTTTTATGTGAA
AATATTGAGTGATTCAAGAGAGGAGTAAATCTGAAATCAAAATAAGTAGTGCTTGCTTAG
GCCCTGTTTGGTTTCAAATAAGTCACCAACTTATAAGTTGAAAAGTGTAAAAAGTGACTT
ATTTTACCAAACAGACCCAACTTATAAGTCACCCCAACTTATAAGTCATA