Contig Data
morexGenes
Links



Map Locations of contig_1561258 (3666 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1561258

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11507 2 1451 bp AK356528 Available Available None





CDS Structure of MLOC_11507






Contig Sequence (3666 bp)

>contig_1561258 3666 assembly3_WGSMorex_rbca.fasta
ATACATCCGTATGTAGTCCTTTAATGAAATCTTTAAAAAGACTTATATTATGGAACGGAG
GGAGCAGGTCCTTTAGTGGAATCTTTAAAAAGACTTATATTATGGAACGGAGGGAGTAGA
CGGAAGTGGAAATTCAAATGGGGCGCTCTTCTATTTGACGCAAGCTTCGGAGATTTGGAT
CACACCGTCCGGTCATCCGCCTCCTATTCTTTATCTTCACATCATACATTAGAAATTTCA
TGCTCCTGCTATGCAATTTGGGCTTGAGAACAATTTATCACGAACTTTGTAGGGCCATAA
AGAACTCAAGTTCTCATCCATAGTTTACACCAAAATCGCTACCTAAGTAAAGATGTAACT
GACAGAACAGAAGAAATTAAGATATGTCATTCATGCACATCATCAAGCATACACAAACAC
AACTCAAAATATTTGGTAACGTCGCCGCGGGACGGATCTTTTACGACATTGGTTTTCAAG
CAATACGTTTATAGGACTACAATAGAAAACAAAGCGCATCCAACACATCACTCATCTCCA
TTGGAGACAAGACTGACTGGAACTAGATTTGTATAACAAAATTGATGGTGTCAACCATGT
GGATTGCCAACCAGCAGTGATCCACTACCGCTTGCACTTGGCTTTCGCCATTTTCTTCCT
CTTCTTCTTATCAGCCTTGGGGATCTTCTTCTTGCGAGTTTCCCTCTTCTCTTCCTTCAC
TTTCTTCTTGTTTTCCTTGCGAGCAGCCTTCCTTTCCTCGGGCCCCAACTTTGTGGACTC
GTGCCACGAACCGTCTTCATCAGAACTAGAGCAGGACTCGCTGTCACCCGGTTCATCTTC
CTCATTGTTCTCCAAGGAGCACTTGGTTTGCAGGTCCAAGGGTTCTTCCAGTACATTTTG
GGACGGTCGTGCTTCCTGGTTTTCGGTAGGCTCGTTTTTAGCCCGCACAAATCCTAACAG
TGGCTGGTCATAAAGCTTATCTGCTGTTGGCTCGTAACCAACGGATGGGCGTTGCATCAT
TGACATGCTGACAATGTCTGCCTCACATTGCTTCACGTAATCCAACGTCTATCAAAAAGA
GCAAAGCAGATAATATTATTAGTATGTGAACTGTACAACACACAGCACAAACATATGAAA
GAAACAAAATAAACACAAAATAGTTACGAACTTGTGTAAGAGATCTGGGAGACAAGACTA
ATTTGAATCAACATACTAAATTGTGTAATGGCAAGCAAGAGATCTCGGGAGACAAGACTA
ACTGGAATCAACATACTAAATTGTGTAATGGCAATACCTTAAATCAAAACATAGTACTCT
ATTAGGGTCACTGCTTTAGTACTATATTTGTACAAAATTTACGACACTTATTTTGAGACG
GGGGGAGTATAAAATAGTGATGATTGATGAGTAACAGATATATGCAACAAACAAACGTGT
GCCTCACATATTAGGGTCCCTCACCGAAGAAGTGAAGATGCTCACTGTTGTCAAATATAT
TTCTGGCAAAGCTGCACAAACGCATAGTAATAATAACAACAATCATATTCCTACCTGCAC
CAAGACTGTCGGAGCAATTTCATCATCATCTGCAGCTGTATCTTCATTTTCCAAAATCTT
TTGCTGAATCTGTTGTAACCACAATATAGTTAACCCATCAGATCTTCTGTCCAAGGATGA
GCCTATAGTATCACACAAAAGTCAATGATTGCAAAGTAATGTAACTGCTGAAAGTAAAAA
TAAGGACATACCTTCTCCAGGTAATCATCAACATCTTCATCGGCGATATTTTGGTCCACA
ACGAAATTAAATAGCTCTGTTACTGTCATGACAGCAATGCCTCGTTTTTCAAAGAAATCC
TGAAAACAGCATTGCCCACGTATTAAATACCACGAGTTGTCCATGTCTCATCAATTTTAA
TTTAATTTTACTCACATTAACATGCAAGCAATCTTCCTTCAGGAAATCCAAAGCTGAAGG
ATGGTCAAGATCGACAGACTGTGAAACATCAATGATGTACAAGTGTCCCTGCACAACAAG
CAAATAAGAATGAGGAACCTCCTTAACTAGGAAATGAAAGAGGTTAAAAAGGCTTAATAA
AAAGTGTTCAACTACCTCATAATAAAGAATGTTGTATTCACTCAAATCACCATGGACAAG
CTTGCACTTTTGGTAAAGTGTCCGCATCGTTGTAACAATCTGAAAATAAGCTGCAGTAAG
TATATTGGAAAATGGTACGATAAAAGTACCCAAAATCTAATGTTTGGGTACTATGTGGTT
CCTTGTTCATTCTTCTATAGGTAAAAGACCATATTCAGCTGACATTTCAACTGGTAGTTA
ATCTTTGCATGCGTCATGTACCTCAAAGTAGGTTTCACGCAACTTGTCATCCGACAAAGC
AGCATCCTTCAGACGAGGAGCAGCCCAACCTCCTTTTCCTGAAGGAGAACCAACTCAAAT
TTATTAGACGCACTGATAATACCTTTGAAGTACTGTTCTGTGGAATGTTCTGCTACAAGA
CGTATGTTTTGAACAATTATTAGTCCACGATATGAAACCATTTCTATAGGAAAATGTTGA
TAGGCATTGAATAAGCAAATGTCACCACAAGATTTACCTATAAATTCCATCACCAAAACA
TGAAGCCTCAAGAGCAACGGCTTCGGGCATCGGATTCCTTCTGCTCTAACTCTGAACAAG
GGAAAGAAGTGTAAATCTTTTTATTTCAATGACTGAAAGAATTTTGCGAAGTATTGCAGA
AGATAAAAATTATATATGGTGCAAATTTAATTTAGAGAGAGACAGAACAAAATATAGGAT
AGCAACAGCTTATGCCTCCAAATGCATCCTCTTTTTCCACAAAAACAATAAGAACACAGT
TCAACAACAGGATCATTGAGAAATATCTTGCCAAATTACTGGAATGAAAATCATGAACAA
AGCATGCTTAATGAGAGTATTTCATACCGTAAAAGATTTCGCATTTCCTTTTCAGCCCAG
GTCTTTACCATTTTCCGAGGATTATGCTTGCAGTAACCATGCCTAAAACGATAATCTCCT
TGAACGTATCGATCTCTATCCCTGCAACAAGGAAGTGTGTACTTTGTTCACATGGAAACC
TTTTTTAATCAAAATACTGAAAGGATACAACAAAATGCCCATAAACAGCATTCTGATGTA
GCTTTGAGTATCCAGTTGTTATAAGACAGAGCAAGTATAAAATCCATATCTTACTTAAAA
ACAAGCACTGAAGTTTTATAGACTTTGATTGCTAACTCACTGCCATCTGTCTTTGTTGCA
TGATATACGTTTGCCTACAAAGAATAAAAAATGCCACAGTTAATATTGAGTGTGTTATTC
TAATTATAGATATATAGAATGATGAATTAAAAATGCAACTTGTAGTATGGGATGCCTTCT
CTATTTTCCTCTGTCAACAGCTAAAGTGGGGCTATGCTCCACATACTTTTCTGCTAATAT
TATTTTTAGATCAGCGGGTGCAATGAAACCATTGAGGCAAGGAGGCAAGGCGATGAGCCC
TGATTGTATCCCCATTGAGGTGTGGAGAGGCCTCGGGGACATAGCAATAGTATGGCTAAC
CAAACTTTTCAACCTCATTTTTGGGCAAACAAGATGCCAAAAGAATGGAGACGGAGTATA
TTAGTA