Contig Data
morexGenes
Links



Map Locations of contig_1561038 (5039 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1561038

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11417 5 958 bp MLOC_11417.1 Available Available LOC_Os03g61810.1, FRAME:-1, EVALUE:7e-105, 13103.m06812 protein tRNA-specific adenosine deaminase, putative, expressed





CDS Structure of MLOC_11417






Contig Sequence (5039 bp)

>contig_1561038 5039 assembly3_WGSMorex_rbca.fasta
CATGCGACGTTCCCCAACAACCTTGACCTCCAACGAAACTAGACGCATCGCCAGAATGGC
GCGAGACGAGGAGAGCCTTATTCAATTTGCAGGGAGACATCATTGTCTCGTCTTCATAAA
CAGAATACAAACCCTAAACAAACTCATAAGAATACCTAGAAACGAAGAAGGTCCCTCACG
CCGGCAAGGACCGAGGTCCATGCCTCCATGGTCCTAGGGTCATCGGAGACGAGGCGGACC
GATTGTGGCGCTAACGGGAAGTAGAGGAATCCTAATTACTTTCTTGGACACGAGGTGAAG
GTGGCGGTTGAGTAAGGACACGCGAAGGAAAGCTTTCCCATTAAACAAATCTGCTTGTAT
TTTTTATCGGAAAAGTATCAAAACCACTTAAAAAAGATATGTTGGGCCCTTAAATAGTAT
GCACATCATCAACAGACATTAACAATAAACACATGCATGATCACTAACCCATACATGTGG
ATCATGTTGAGGCTCCCTCGCTAAACAGTGTGGTGCAGTAATGGCGGCAGGTGGCCATTG
GCGGGACGCGGCATTAGCGCAGATCCTTTTCCACTCGGCACAGGCGGATGCACCTGACCT
GAACGTGTTTTGGGCGCGCCATGCACGAGACTGAATAAATGGAGAAAGAGGGAGAGATCA
GGATCATCTTCAGGCTGCGCCAGAGGCTGGCATGTCGGGTCCTGGGCCTATTGGAAGTGA
GAGGAAGGGAGATGGGTGGCCAGATGCAAGATTTTGACCAGAGACCACATGGCAAATTCG
GGACAGATGGACAAACTTCGATGTTTGGCTCCAAATTACTTTGATCCAAAGGGGAAATGA
CGTGCACTGGGATTTACACGGTAAGGTTCATCTTCAGGATTATTTTGAGATTTTCCAAAT
GATTTGTTTCATCATCGCCATGTCCAGTTTTTTAGTTGGACCGATTTCTGGGAGCTTTGC
CTGCATCATCATCGTCTCATCTGTGTAGTCCTTCTTGTTGGGCGAGCCGGCGTAGGAATC
AACAAAGTGCTTGTATTTGTATTTCATGTTGGAATCCATTGCTTCAAAGAAGAAGGGACA
ATTTTTTTAGCTGGGGCAATTCACCGAACAATTGTCGGGCATGATGAGCAGAATAGGAGT
GGATGGTACATGCGTGGAGGAGCGGATGGTACCTGCGTGGCGGTTGGAGGAGAGTTGTGG
AACGATGGCGATGGAGAAGCGGCGTGAAGCCCGGGTGTATCGTTGGAGGTGACGGACTTG
TCGAGTTTCGACATGGGTGTGGCATGGTAGAGCGACGCCGAAGGCAAGATATGAGAGAAA
ATGGGAGGATGAAGGCACGGGTCTCAGATGGGTTTTGGATAGAGGGGGGGGGGATGTCGG
AGTTCTACATGGCTGCTTCCCGGACCCCCACAAGCCACCCCGCGCGTTTGTTTCATAATC
ACCAAAAAAAGAATGTTCGGACCCATAAAAACCCGCGTTGGATGACTATACACGTACATC
CCGTTCAATCTAAATGGTAGCGGGCGGTTTGAGGGTCCGTTTTAAAGATGTCCTAAGTAA
TTAATCGTATGAAACTCATTAAAGCTCGCATCGTATATTTCTGTGAAGAAAAAGAAATAG
GACCAAAATGGCTGGCTAATGATGATGCGCACGACGTTTTAGCTCTCGGGAACATATCCT
CTAAACAGTAATTAAAAATGAATATCAAATTAAATTAAAAGGTTTTGAATATATTTTTTT
GTATATGTTCACGTCAGTGTCGAAAGTGTGAAACAAAGAAGAAATAGGACGAAAATGGCT
GACTACTACTGATGGGCACGGCATTTTAGCTCTCAGGGAGCATATGCTCCTGGGATGAAC
AATAAATTAAAAGCAAATGCCAAACTAAATTAAAAAGTTGTGTTTCTCTTTTGTACATGT
TCTTGTCGGTGTTGAAAGTGTGCATGACGCGGAACATAATAGTTGTAGTTCTGTTTTTCT
TTGTATATGTTCATGATAGTTTCCACAATTAATGTCTCAGAGTTAAGTAAGATCAAATGA
GAATCAAATGGTATATTTAAATTGACAGTTTGTAGTCCAGCACCAATGGCATAGTTTTGG
CAAATACATTATTTTTTCTGAGCATCAGGGGCTTCCGTGATGTCAAATCACGTCACGTCT
GTATGTACACATCATTTCAATCGAAATTTCCCCTTGGTGTTCTCAAAGACCTGTTCAGCA
AGCAGGGCTCCAATCCCATCTGCTCGCTTTATCTCCAGGTTGGGCGTATGGTAGTGCCCA
GTTCCTCTGAGAGCATCAGCAATGAAGGCATCAAATCCAATGGCAACGGCAGCTTCTGCC
TTGGCTCCGTACACCAGCCTCTGCAATGCAGCATTCAACATGATCTTCGATTAACCCTAC
CAGATGAAGAATGCTGAGGTAAGGGGCGCGCGAACCTTGATCCGGGATAGACGAACAGCG
CCAAAACACATCGGACAAGGTTCGCAGGATGCATACATTTCGCAATCTGACAAGTCGATC
TTCCCAAGCTTCCTGCAAGCCTAGAGTAAAAGCAAAACACTCATTATAGGACCAAACATT
GGAAATGAACTAGAAGAAAATACTAAGCATCAGAATTTAAACAGTAAGCATGCATGAGTG
CATATATTTACAGGGCACCTCAATCATGCACCTCTCGTATTGCAGTTACTTCAGCATGTG
CAGTTGGATCAGTGTTCTTCAAAACCATGTTATGGCAGCTGGCCACTACTTGGTCGTTGC
GGACCACGACTGCACCAAACGGGCGTCCATGGCCACAGTCGACTGCTCGGTAGGCTTCTT
CCACCGCTATCGATAAGAACTTGTGCTCCTTATCTTGTGCGGCTGTTCAAAGAAGCAAAG
CATACACAAGCTAGTCTTTTCTCTTTAAGAAAGTGTGTTTCTCCAATTGCAGAGAATAAC
AAAGATGTTCATTGGGCAAATACGTCATGTCTTGCAATGTGGTAATAAGTAGGGGGCAGT
ACCTTCCGGATGAGCAGGAAATGCAGAAGCAACCGAGGTGGCTCCGTCCTTGGACTCCAG
AACTAGAATTCGCCAGAGAGATTTTTTGCATGAGATTTACTTTACTTTACTTTGTGAAAA
GGTAGGATGAAATAGAATGAAGCACCTCGGTGGAGCAACTTAAGAAATGTATCGAGAAAT
CAGCACACACTCATAAACAAACAAGATCACCATTGAACTCTGAAAGATGGTGCAGGGCAG
GACAATGGAACACTGACAGACAGCGATCGGCGTCAATCATTGCTACGGTTTTGAAGCACC
TAAGCAGATGACAGTTTTGGTACTGACAGCCACCCCACCCATCGAGATCCAAGCCCGCCA
TCCCACGAGATGGCCAGCAGAGCGTACCTTTGGCTTCGTCCATGGCGAGGGATGGGTGGA
GGAGGGGAGCGGCGGAGCAAGGGGACGAGATGCCTCCGGTGATACTGATGTGGGTCCGTC
CGTCCGTCCGTGGGGATGGGGAGGAAAGGAAAGAGAGCCTGCCTGTTCTGGTGCTGGGTC
GTCGGCCGGAGCCGACGCCCAAGGCTGATGAAGCTGGAGCATGGGTCCACATCAGCGCTA
GTACAGCACTACAGCTTCTCACGCCGACCACGCGTAAATTTTATCGATTATCATGTACTC
CCTCCGTCCCAAATTCTTGTCTTACGTTCATCTATAAAAAATATGTATTTAAATACTAAA
ATATGACTAAACACATTCATATTTAGATAAATTTAAAACGAAGGAATATGTACGTATTAT
CAAACTTGCAATCTTGAGCAATCAGCACCACACCGCATAATCAATAATCTTTTCTCCTTC
TACAATATTACACTATGCAAGTTTCTAAAAAAATTACAAAGACTAGACTAAAAATGGTTT
CTTTTAATTCCTAGATACAGAAACAGAAGGAACTTTTTCTTAATGAATTAGAAAAAAACT
TTACTGAAAACGACTTTTTTCTTTAGCCACTGAAACTACAAAAATCTAGTTGCTTGAAAA
GAAACACCACCTCAATCTGCACACTCTAATCATCAAGAAACAGTCAGACCATCCACCCTA
TCCCTCGGTATAGGAGGGATGTGTTGCCTTGATACGGTCGCGCCACCTTTTGCCGGTTCG
GATGCGTCCTGCTCTTCTCCCCCTCTCCTCGCGTTCGCGCGGAGCTCGGTCGGAGGGATG
GATGGCCTCGATGCAGTCACGTCAACTATGCACCAATGGGTTAGTTAATTCTGAGTAAGT
CTATTGAACAAACGTTGGCTGGATTCGTTCTTGGCGCAACCCAACATCATCCGTCCAAGA
CGTGAGCGAATCTCAACACAAGGACAACCACGCAAACACCCCAAGCGCGGCCGTTCGCTC
CCAAGTCATTGAGTAGTCACGGGGCAGCTTATCATCATCTCGTCATTGTTGTTAGAAACC
AATTAGCAGTTAGTATCAGTTAACAGCAGTTAACATATAGCGTTAGACGTAGGCTAACTA
GGCAGTTATTAGATCTGGCGTTGTCCAAACGCTGTGTCGAGACACCACGACTGTTAGAAG
AGTCGTGATACCATTGTAACCGACGTTGTAAGCGCGTGTTCACGCAATATAAGAGCCCAT
GCGTCAAATCAATACAATAACTCATTCACTTCATTCCTCTCTACTCTCTTCACGTTATCA
TGCACGCATCGCTCTAATGCAGAGTAGGCTACAGGAGAGAAGAAAGGTGACAACAGATGG
ATTCTCTGTCGGACCTTGCTTTTGCTTTTGCCAGGTTCGTGGTCAGGGAGCACCATGGTT
TCCGCTTTCCTCGTCGGACCTTCGGTCTGGCCGCCGCTCGTCGCTGGAACTTCCGCCGCC
GCTATCAGCGTCGCCCGAACAGGAACGGTGGCCTCCGTCACCGTGGGGAACCATACCGTG
TTCCTTGCCGTCAATAGGGACCGAGTGGTGGCCTCCGCCGCCGCCATACCCATCGCCAGC
ACTTCCACCATGTGCATCGCCGAGTGGTAGTCGAGCCAAGGGAAGAGGCCCCGGTCATA