Contig Data
morexGenes
Links



Map Locations of contig_1560980 (3835 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1560980

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11393 1 463 bp AK356178 Available Available None





CDS Structure of MLOC_11393






Contig Sequence (3835 bp)

>contig_1560980 3835 assembly3_WGSMorex_rbca.fasta
GAAGAAGAGGGGGAGGAGGGAGGAGACGAGGAGGAGGAGGGGAGGGTAGAAATGGAAATG
TTTATTTTGCCAAGCGGTTTTGACGAGGGTTTAAGGGAGGGGAGTGACACTGCCGGTGGG
CCCTGCTCACAGCGTGCCGCTGGGGAAACGGTTACCGGCGGATATGCGTGATCCAGTGGC
GAAGGCGCACTTTTTGTAGGGATAGAGATGCGCTTTGACACAAATTGTGTTTATAAAATT
CCTGACCTAAGTTGAAAATGAAGCGAAATATGTTGCCCAGAACAAAAATTTACATGTTAT
GTGTGTATTCTTAGTTCTTTGTGGCTACACCTCGGCTCAAGGAGCGCCGACGAGGAGGGG
AGGATGGAAAGTGGCGACCAAACGGTTTTGACGAGGGTTTGACACAAGGATGAAGGAGAG
ATAGCGTAACAGAAGCAAAGAAAGAGCATTATGATTGAGAAGGTAGTCAGTTTATGTCAC
TGTTTGAGTCGTATGCTTGTTGACCTTTTAATTGACCACTTACTTTCAAGTACGATTAAA
CTTTACTGAGTTACATAATGACACCTCATTAACTTGATACACTGATATGAACTGAGAAAT
CAACAAAACTTCGGGTCATGATCATATACATTCTACTTAAGAATGCCACCACTCACAAGG
TATAACAAATTTTTTGTTTATGTGTGCAAAATATGTTCAACTAATATAGAGACTTCCATT
CCCCCCCCCCCACAATGTACGTTGAGTCACAAACTTGGTAGGGTCTTTGTGTCTATAAGT
TCGGCCATTACGTTTCAATGTTCTGAATTCAGAGAACTACAAAGACAAGCAAAAAAGTAA
CTCCTCTCGTAGTGATTGTTGGTGGTCATTATTGGTTCTTTCTCCTTTTTGCTATGTTGG
AAGAGTTTTTAACATATCCATTAATCAATCCTCAAATCCTTTGTACATCATAAATGATCC
ATTTGACAGTTTTGACTTGAAGCCTTCAACATCTAGTCTAGCTCAAACAAATGAAACTTT
GATTAATACTTCAATTGTTGTTTTCTCCTCGTAAACTGAGGAAACGTTGAATTTCTATTG
TTTTTCATCACACAAAATAACTCATTTAAAAACAATATAGTGAACATTACGATCTTTTCA
CATATTGTGTGCTATGTGGTTCTTTTGAAAGCTATTGACATGTTTAGTCTCTTGTTGTGT
GGTTGCACGAGTGTTGTTGTGTGGTGTCGGTCTTTGATCGCCTCGTCTTAGTGATTAGCG
AACACTGCCAACAACCAGGCAATCCTTTTATTATTTTGTTGATCACTAATAGGACGTGTG
CATACTTTTATTGCTCACTAGCCGGATATATCCATAGTTTTATTAATCACTAGCTGGATG
TGCATAGTTTTGTTGGCAGGGTTTTATTTTATAGTCTCCTCGTGTGTGTACGATGTTCGA
GAAGTTGGAGAAGAAAAACTTCAACGTCATGCATTTTTTGTTGAACTTGAATGGACAACC
CAGGTTGAACATATACATGGACAAGACTGTCGCCCAAGTCACGGAGGAAGAAACCGGTGA
CCCAACCGATCCAATAAAAGAACCACACAAGAAGCTTAGAAGAGCGTTTCGGGGAAAGAA
GTGAGAGGAGGAGAGGGTGAAGCGAGAATAGAAGTTTGAGGACATCTTGTCCAAGAAAGA
GAAGGTATACGTCAAGCGCTCAGACATTAAAGAGGAAAAGATGGCGGTGAGGTTCAAACT
GTTGATGGAGACGAGCGAGAAGAAGCTAGCACTCGAAAAGAAAAGGGCCATGATCAAAGA
GAATAAGGCCATGCCCGAAAAAAAGAAGGTGAAAATCGCCTACAATGCGGAGGACGCCGA
GATGTTGTCCTTGAATTTGGAGTCTTTGGATGCCTGCGTAAGGATGATTGTGCAAGTCGT
CCGCTACAAGATGTTATGACAGCAGCAGAAAGATGAGCTGAAGGCGGCGATGAGGGAGGA
TGAGGAGGCGGCGGAGGCAGGGGTAGGCTGCATATGGGGCGGCGGCGACACCTTGAGCAT
GAAGGCTTGGATTGCAGTTTCTGACATGACAGAAAATCTTAATTTTCTGCACGAACTAAT
ATTCTTTCGTGGTCGGACATTTAAAAACTTAAGAATACTTGTCTCATTTTGGTTGTGATT
GGGTATGTGTTCCCGCGCTGGTGTGATCTTGTGCGGCGGGTCGACATTTTTTAAATTTGA
AATTGCTCTTTATTGACAGACATATAGAGGATCGTATTGGATGGCGGCCTTCGACACTAA
TGTCCGTGGATTGATCTCTATCCGTGAAGGTATGTAGAACGAAATTTATGGGTCAAATGT
TGGAGATACTCCTACATACTACTCCCTCCGTCCCAAAATAAGTGTTTCAAGCTTAGTACA
ACTTTGTACTATAGCTAGTACAAAGTTGAGACACTTATTTTAAGACGGAGGTAGTACTTT
CGAGTTTAATGTGGGGCAACGTTTGAATAACGATAATTCACTCCGAAGCCCGGGTTTAGT
GAACACGGTGAATAGTAACGCGACTAAAAATGAAAAAAAATTACAAAAAATCCTTTTTTT
GTGCTGTAAGATGTTCTTGTGCGTAAACTCCTTTCAAAATTTTCAAAAGTTTGGACACTA
TAAGATCTCCTGGCATAAAAGACAAAATCAGACGTGAACAGTGCTATTTTCGATAGTTTT
TCCGACATCCAAAATTTGTCTTTTTTACCACAAGCTCCTTGAATGTCCGAACTTCACAAA
ATTTTACACGCAGTTTGCGTACAAAAGCATCTTGCACCACAAAAAAAAAAGATTTTTTTA
AACTATTTTTAATTCAAAATTGTGGGTACTGGTCAACCCGGGCTCATCTGAGCCCGGGCA
CCAAAACGCCGCTCCCAATAACGATAATTCATAGCATGTGCATGTGATGCCAACCTTGGT
ACTACACGCCCTTGCTCCCAATGACGGTAAGTTTGATGTACGAGCGAATGGGTGCAGCTG
CATTTGCCTGATTCGTGCTGCAGCAGGTTAGAACCAGATTTGAATCGAAGAACACACTAG
TAATTCTACTGCCCAAGATTTTGGTATCTCTAACAGCAATGCTCCAACTCCACCACAGTT
GTTACAGTGGGCTAAGATGGTCAGAAAACAGAACACGCGCCAGCATGTAATTTATACGGA
GCCTGAAACGAGCGCAAGAAGCAGCAGCAGCCAAGCCTAGGACGAGGTGAAGTTGGTGCC
CGGCCCATGACGCTAGCCAAGTCTGAAGCTGGCTCATTTTTCTCAAAAACAACTTGCAAC
ATTCAGTTCAAGAACCTGGTAAAAATTAAATCGGCCGCACAGAAATGAATCATCGTTAAT
AGATCTCTGTTTGCGCTACAGAATTCAGTTCTTATGACCAGCGAGCGAGCCGAAGCGTCG
GCAGGCATTCAGCTATTCCCATAAATTCAGTAATGATGTACTCCTACTGAATGGCCCGAA
CAACTAAAATACAAATGGCCAAACATTTCAGAAGATCAGACAAGCAAACATCAGCAAGAC
CATCACCCATCCAGGTATAGTACCACCACAACTTCAGTTCTAGATAGATTTCAGTCTGCC
AAAACCAACAACTTCAGTTCTTGCAACCAATTAGCCAACAAACCGTTGGCAATCACCCAG
CACACGTACCACTACTACCACCACTACTTGCAGAGAGATAGGCAGAGTCAAGAGCACAGA
TACAGATACAGAGACCAACTACAGGGAGGTGACGGACGCATCAGTCTAGGAGGAGGTGAA
CTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGG