| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_1560926
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_11364 |
2 |
780 bp |
None |
Available |
Available |
LOC_Os01g70020.1, FRAME:+3, EVALUE:2e-11, 13101.m07598 protein DEK C terminal domain containing protein, expressed |
CDS Structure of MLOC_11364
Contig Sequence (5392 bp)
>contig_1560926 5392 assembly3_WGSMorex_rbca.fasta
TCCCTTGAAAAGAAACACCACCTAAGTCTTTCTAGAGATTCCATTAATGGACTACATACG
GATATATATAGACATACTTTAGTGTGTATATTCACTCATTTTGCTTCGTATGTAGACGCC
TAGTGAAATCTCTTAAAAGACTTANATTTAGGAACAGAGGGAGTAGAAAGCTGTTATAAC
CAATGTTTCCATCTTCTCCAGGAAAAGGCAAGGTGGCCCCAACCACTAAACAGTTGCATG
CTGTTGTTAGTAACATATTGAAAGAAGTGGACTTCAATACGGTATGCAGATGCAGATTAC
TCCCTCTGTAAAGAAATACCCCCTCCATCCCAAAATAACTGTCTCAACTTTGTACTAGCT
TTAGTACAAAGTTGTATCAAGCTTAAGACACTTATTTTGGGACGGAGGGAGTATAAGAGT
GTTTAGATCCCTATTTTAGTGTTCTACATGCTCTTATGTTTCTTTATGGAGGGAGTATTA
TGTTATGTTGTGTTCATGTTGCATGTTTTTTGGTCCTTCATCATTCTGACCTGGCTACAT
TACCTTACCTTCATGTAGGCAACTCTGGCTGACATTCTCAAGAAATTAGGTATCCTGTTC
TTGCCATTTTCTAAAGTTTCATTGTAGTATCCCCTCTGTTGCATAATGTAGCGTGTATAG
ATTATTTGAAAAGTCAAACATCACAAAATTTGACTATGTTTAGAAAGTCTATGAACTACA
CTTTGGAACCGAGGGAGTAAAGGAGTCATGATGAACACAATTGTCTGGTGTAATGAATGC
ACTGACATTTTTCTGTGTTTTTTGCTATCACCTCAGGAGACCACTTTGACATGGACCTCA
TGGATAGGAAGTCGGAGGTGAAGCGCATCATAGAGGAAGTGATCAACAGCATGTCCGATG
ATGAAGGCGAGGAAGAAAACGAGGAAGAGGATGCAGAAGAGAATGGCAGGAAGGAAGAAG
ACTCAAAGGAGGATCCTGATGAAGAGAAGGATGAGAAATAAGCTGAGCTGGCCTGACGAG
ATGTGATATCCTGTATTTGTCGAGTGTTCTTCTTGGTTGCTGGCGCTGTTTTTCGCCTGT
ACAATGATGGCACCGCAACAACCATTTTGGTGGCCTGGGCAGTGCTAGAATGTTTGTTAA
CCATTTGGTGGCCCTGCATGCCTGGTTGTTGTGCTTGACTCGGTGTTATTGACCTGTAGT
CTCTTAGTTGCTGGTCATGTACAATAGCTGTTTGGTCATATGACTATGTTTCTTTCTTAG
GTAGCTAGCCCTGACTGTAATTTGCAGCATGCATACTTATCCTTGTTCTGTTCCTTGCAT
TTTATCCATGTAAAACAGTTGTATTCTTGTGGATTTCTTGCTTGCGCTGTCTGCAATTCA
TGCCTTTCTCACCATGTTACAAATGCAATGCGTCTTATGTTGATGTGTTATGACTTATGA
ACTATAGTAGTGTTGTTTTTGCTGTGACATTTTTGAAGTTGATAGGGGGTCTGATTTTTG
TTGTTTGAACGGTGAACGAACGCACCATGTTCATTCAGCTCAAATGCGTAGTACTGCATG
AATTACAAAATCATGAAGATGAACTCCGGAGATTCTTGTATACCTGTGAGTTGAACAACC
AGAGAAAACTGAAAATATTTGGAATGGTGGCATGAGGATGATCATCAGTAAGCAGCTTCA
TATTGGACTTCCATCCTCAAGATGATCCCTAAACCCTAACATGCCAAGGAGAATCGAGCA
GCCCTCCTCATACCAGAGCCTTGCGAAGTAGCCTCCATGCACGCTTGTTTGGCTGATTTT
GAGTGCCGTGCAAACAAGGCTACCTTCACAAAGCAGTGCATCAAGGTGTGTTCCAGGCAG
AAATTTCACCTTGGGTAATGTGTTGAAAGTAGCGAGCTTTCAGTTTACGGATCATCTTGA
GGATGGAAGTCCAATATGAAGATTTTGGCAAGCTAGATCTAACTGTCCAAAGTGAGGAGT
CAGGGAAATATTTAGACTTGCTTCAATTCTCCAGACAGTAGAAAGTATTAGACCCTGATT
CATAGGCTGTAGATTTTCGGTACAGCAATCCTTCCTCATGTTTTTGGATGAGCAATGTCT
TTCCAAGCTCTGAGACAAAGGCTTCTCGAGGAGCTAAGATCAAACCTAAATGGACGGCGA
TTTTGTTTGCTTTTCGTTTATTTGGCTTGTCCGCTGGCTTGTTCATGTCCGCTTTTTTAA
ACAAATTAAATAAGCAGACAGAGGTAGGTGGATGGTTGTGTGACAAGTGAGTCAGGCTGG
CCACATGCGGACATCAAGGGGGTCGGCACGGACTTGAATTAATTAATTTCAGTCCCAAAT
TTGAGCAGCTCCTCCTCCTCCTCTTGACCGCCCATCTCCTTCCTGCCGGGGTTTTCTCCT
CGGGTGGCGTACGCTCCGGTAAGAATGAAATTTTGTGTTTGCTCGTAGATGTGTACATTA
GGGTTTTCATCATTAGCATGCATTGGAATGGATTTGAGTCGATTTGATTCGAATCGAATC
AAATCAAATCGATTGGATTCGATTCCTTCTTGCGCGGTACTGTTCTTGGGCAGGATAGTA
GTGTTCTTCCTAGTTAGGTGTTTGATGTGCATGCTTAGTAGTCTTCCTAGGCAGGATAGT
TGTGTTCATAGGCATGCTAGATTGTTGTGTGTTTCATGTTCAAGCGTAGTGCATACTGCT
TAGTGCTTAGTGTTGCTCTTGATGTACACCATATTCATGGGCATGGTAGATAGTTTTTGT
GTTTCATATTTATGTTTAGTGCTCATGCGCAAGAATGTGTTAGTCATACTAGTTAGGTGC
TGTTTTTGATGTTCATGCTTAGGGTTCATGAAGCAAGTTATGTAGATAGGTGTTGTGTTC
GATGTTCATGCTTAGGGTACATGTGCTAGTTAGCTATATTGGTGTTGTCTCGGACGTTCA
TGATTTGTGTTCATGCGCTAGTTAGCTATATTGGTGTTGGCTTTGATGTTCATGCTTCGT
GTTCATGTGCATATTAGCTAGATTGGTGCTAGAATGGGTATTCTTTGTTGCATGATTTCG
CTACGTGCATGGTATTCATGGTAGGTAGGACCAATGTGTTTGTTACTTTAGGTAGTATTG
GTACAAATGTAGCATGCCATTGCCAATGTTATTAATGGTTGTCATCTTACCCGACAAGGT
GGTGAAGACGGAGTGGGACATGGCCAGAGGAGGAGCCCATGCCATTGCCTGCGTCGAGGC
CGCCGTGGACTTCATCCCCATGAACCGTTGGCTCAAGAGGGTGAACCTGCTTGACAGGGT
TGCCTTCATGAGCCTTCCACATTCAAGGGGACGATCTCCTAGGACTAGCCATGAGGAGGG
GTCCCGAGAGCCCCTTCAATTCTACCTGCAAATCCGAGATGAGGAGCATCTCGCCATGCT
CGTCATCCCTCCCAAGTTCATGGAGGTGATGAAGGAGTGGCTCACGGTCAAGATCGTGCG
CGTGGTCAAGCTCTCGGTGAAAAAAGTGGTGCGAGTTCTGGGTGCAAGTCCAGAACTTCG
AGGGGCATATGGTGCTTGGCGGGGGCTGGCACTACTTCTACCGCCGTCACAGGATCATCC
CCGGCGACCTCGTCATGATGCGCATCTATGGCTTCGGCCTCAAGGTTCAAATCTACAACC
ATGAAAGCTCCATCGGGTGCAGGATGCGCTGCATCACACAAAACTATGTCGGTGATGTTG
CTTTCGCCCTCTGAACTATGTTAGTATGGACTTGTAGTTAGTTAGCTGTGGTGATGGGAG
AATTGCTGTGAAACTGTTAATATTTTGTCCAGGGTTCAACACCCTGTGGTGAAACAGGGG
GCATGGGATGCCCGTGCTATACTAAAACATACTTTGTTAGCAGTATGAATGCTAGCTACT
AAGAAGTATGGGTTTATCTGCTTGGTTGTGTGATGTTTGCTCCTGTTAAGCTACTTGTTT
AGCTGTTGTTAGTGATGGGGAATGTTGCATAGGAAACATTTTTTTTTCTACGCACATGCA
AGATCTATCCATGGAGATGCATAGCTACGAGAGGGAGAGTGTNNNNNNNNNNNCTTGTAG
ATCGCTAAGCGGAAGCACTAAAAACGCGATTGATGTAGTTGTACGTCTTCACAATCCAAT
CGCGATCCGTCCCGATCAAGCGCTGAACGGACGACACCTCCGTGTTCAGCACACGTGCAG
ATTGATAACGTCTCTACCTCCTCGATCCAACGAGCGAGAGCGGAGTAGTAGATGAGTTCT
CCGATAGCACGACGACGTGGCGATGATGGTGGTGGAGCAATCTTAGCAGGGCTTCGCCAA
GCACTATTGTAGATGCGATCAGAGGAGAAAACAAGACAAGGAGAGAGGGAGGGATGCGCC
AAGGGCTTGGGTGCGACTGCCCCCTCCTCCACTATATATAGGGGCAAGGGAGGGGGGCGA
CCCCTCTAGGTCCCACTTAGGGGTGGGGACGGCGCTCTAGGGGCTACCTTGGCCCTATAC
CTGGCCATGGCATACCCGACACGGTCGGCCCGACTCGACCTGATCCGACCTTACCCACGA
GACGGGCCCGGGCTTGGGCGTGGCATTTCTCCAATTTAGGGAAGAGCCCGACTCGATGAC
CCGAGGCCTGACAGGATTTGCCTCTCATGGGTCGGGCTTGGGCCTCAAATTCAGGCCCGA
CGACCGGGCCAGGCCGGGCTCGGGCCTGGGTTTTTTGCCGTCGGCTTTGTCACGCCCGAC
CCGAGGTACGACGAGGTATACTTGGCCCCCAAGGCAAGGGGGGCAGCCGCCACCCTAGGG
TTTCCCACCCTTGACCGCATGTGCCTTAGGGAGGTGGGTGCCCAACTTACGAGGGGCTGC
TGCACCACCCCAGCCCATGGGCCCCTCCGGGGCAGGTGGACGCCCTCGGTGGACCCCCAG
AACCCTTTCAACATTCGTGACAAAACCCCGGTAAATCCCGGAACCTTTCGAGAACCAGAA
TACCAACTTTCCACATATGACTCTTTACCTTCGAATTATTCCGCAGCTCCTCGTCATGTT
CGGGATCTAATCCGGGGCTCCGAACAATATTAGGTCACCAACATACATAACCAAATAATA
TTATATCGTCATCAAACGCTAAGCGTGCGGACCCTACAGATTCGATAATCATGTAGACAT
GAGCGAGACACCTCTCCGGTCAATAACCAATAGCGGGACCTGGATACTCATATTGGTTCG
TACATATTCCACGAAGATTTTCATTAGTCAAACCAAGATGCCAATGAATCATTCAATCCC
GTATGCAATTCCCTTTNNNNNNNNNNNNNNNNNNNNNNCGAGATTCGATCATCGGTATGT
CCATACCTAGTTCAATCTCGTTACTCACAAGTCTATTTACTCGTTCTATAAT
