Contig Data
morexGenes
Links



Map Locations of contig_1560859 (4206 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1560859

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11340 1 680 bp AK369072 Available Available None





CDS Structure of MLOC_11340






Contig Sequence (4206 bp)

>contig_1560859 4206 assembly3_WGSMorex_rbca.fasta
CTGGCCATGGCAGACGGGGAGCTGCAGCGAACACCCCCCAGCAGGCCGCCGGTCGCGGCA
AGGTGCCCCCAGGCCGCCGCGGTGAGGGCGTGCCGCGCGTTGTTTGGAGAGCACGCCGAT
GACGACGACGAGGAAGGGGAGGAAGAGGAAGGCGATGCGACCCGGTTCTTCGACGAGCTG
CTGGAGAAAGACGCGGGCCTGAGGGGGTTGTACGAGGCGGAGCGGGAGACGGGGCGGTTC
CTGTGCCTGGTGTGCGAGGGGATCGGCGCCAGGGCGGGCAAGCGGTTCCCCGGCTGCGCC
GCGCTGGTGCAGCACGCCGGCTCGGTCGCCCGGACCAAGAGGAGGCTCGCGCACCGCGCC
TTTGCCGACGCCGTCGGCCGCCTGCTCGGCTGGGGCGCCGGCCGGACCACGCCTTTTCCG
GTAAACATTTTATTACCTGGTGAATGTCAAAATGTTGCTGAGTACCATGCCTATCACATT
GCTGAATGTGTTGTTGCAATCGTGCAAAATGCAGGCAGATTGTGACAACGATGGCGCTGT
TGATCAAGCTGAGCACTTGGATGCTTCTGAATGTGCAGAGATGGAGGCGGTCTAATTGAG
CTCATGGTGCCTAATTAGTGATTCTCTCTTGGTCAAAAACCCGGATGTATCGATAACCTT
GATGCTCGGTGTCAACATCTGCGTGTAATCTAGTTCGATGCTCTGGTAACCTAGATGCTT
ATTTTTAACATCTCAAGCTGGATCTAAAAGTTTCTGAATTGCAGTGCATCGTATTTCAGT
TCTTGATTCCTGATCTGTGTTGATCTTGAGTTTGCAGGAAACGAAAGTAAATATCCATCG
AGTCTAACTGCTGAGAAGTATATTCTGATTTTATTTTATTTCGAACTGAAGTAGTCTAAA
CCCTTTTTATATGCTCCCCCTATTAAACCAGCGACAAGAGGGAGTAGTGTTTTTTCTGAA
CCTAGGGTTGGAGGCCATTGTCTCCTTATCCTGAAAACAAATTCACGAATCACAACAGCT
GTCCGAAGTATTTCCTCCGCTCCTAAATATAAGTCTTTTATAAAGATTTTATTTGAAAAC
TACATACGGATGTACATAGTAGAATGGACGTTTGGAGGCCGAGCTACATAAGAATGAAAT
ACCTTGAAATATGATCTGCATAAAAAAGACAAATTCATGGTCTAGAACGATGAATAGTAT
CATGTATTAAAAAGCCTCAGATTTGTCTTTTTTGTACAGCCTTCATTTTAACATATATTT
TTTCTGAAAATTTACACACATGTGTATTACGCCTTCACTTATCTCTGTGTTTGTTTTCAC
AATTTTTGACATGTAAAAATATGAATTTTCATGAAATTTGAGTTTTAAATTTAAAGGCCT
TCATGAAGGCTGAGCTCCAAAAGCAATTTCCGTGTATATAGATATTTTAGAGTATAAATT
TACTCATTTTGCTTCGTATGTAGTCCTGTAATGAAATATCTAAAAAGGCTTATATTTAGA
AACGGAGAGAGTATGTATGAATATTCTGAACACATATCTACCTTATTTTTTACTTCCTTC
GTTTCATAATGTAAGATTTTTTTTAACACTGCACTAAGAACATCCTCAATTATGGGACGG
AGGGATTACATAAGGAGCAATCTACAATAATGTGATGACACAGCTTAAGAAAACATACCA
TCACCTGATAAAGAAAACTTTATATTAAGATTCATATCAGTCTCTTGTTAGAATTGATTT
TTTTTGCTGATTTTATCTTTTTCAAATGATCAAAATACTACTCCTATTTACTGTCCATTG
AAAAAACATCAAATTTTCCAAACTGAAGGATCACAGTACTGTCACCTCTACCAGTGCCGG
TGGAGTAATTACTTGGAAGTTCTAAACTGAAGAAGCCATAACCAGGCCATGGAAATTCAA
GCACCTCAAATGCTCGTGCCATCGTGCCAACTTATTATCTAGAGCCAACGAGCTCGGGGT
GCTGAGTTTCTCTGCCTCCTGTGGATCTATTGTGAGAGGGCCCTGAAAGTTGCAGTGTAT
TCTTTTCCGAAACTGCTCTGCACACGACAGTGCACGGACGAAATCTGCATGATGCCTATC
CTTAACGGTGCTGACTGTGAAACGAGGTAATCTAATGGATGATTTGATCCATCGTTCACA
AATCGTGTGAAAAACTATCATCTGTATAGCACTGCTCATTCGTTTCGGTCCACATTATCT
ACATAATTTGTATTCATAGGACACTTGTCTAATTTCAGAATTGCCGCTCGAAGCCAGTGT
CCTTGTTTGCTTGCTTAGAGCATCTTCAACAGTTACGCAAAATTCGGCGTGCTTGGAAAA
ACGCGAGTTAGGCGCGAGAGGCAGCACGAGGTGCTTCAGCAGGTGTGCGAAATAAACTGG
GCCATGTGCGGGAAAAGCGGTAGTGGCAGTGGAGTTTTGCTGCACGACGTCCAACACGTT
GGGTTAAAAAGTTACGTGCCTGCGCCCACCAACCGCCAGAAACTTCCTTCCCGCCACACC
TTCTCCCTTCGCCTCTTCTAGTGCCCTGTCGCCGCGCCTTGTCCCCCTCCCGTCTCTTCC
AACGCCTCGCCGCCGCTGTGCCTTCTCCCCCGTCTGTTCCCGCGCGACCCTGCCGCCGCT
GCACCCCCGAAGCAGCTCTAGGTACCGCGCGTCCGCCTCTGTCCCTCTAGCATGTATTAC
GCTGAGATCCACTACGACGATACACGCCCCAAGCTCGGAACATTTACCGCCCACGAGGCC
GTTCTCTCGTACGACGTGGTGACATGGCACCTTCGACGTGTGGACGCGTCAGCAGGCGCA
GGATCTCGCGCCTCCCCCACGACTAATTAGCGACGAGGATAGTCGCCTCCAGCAAAAGCG
GGAGGGCCGTTTCCTCATCGCCCAGGCGGACGAGAACGCCATGACGGTGTGGCGTGAGCG
ACTTCTCGCAGGATGTCACCGTCGAGTACGAATTCTGTGCGGAGCGAGCCGCGCATCGGG
CGGACAAGCGTGCGCTGAAGGAATTGACGGAAGCCCTGCTCGAGAACCCGATGTCGACCT
CGGACGATGATGATCCTTGATGGCTCGACGCGTGACACTACACCACCGAGGAGGACGAGG
AGTAGTCTAGCATTGTTATATCTATTTTTATTTAGCAGCATATGAACTTGCTTACGGTTT
GGGGCTTGAACTATGCTATGAATTTGAACTATGAATGTTTCCATATGCGTTGTTCATATT
TTTTCCAAGCGCGCGCTGGATATTACTGTGCCAAGTGAAGCGCTACAGTGGTGCACTAAA
TTTTGCAGCGTGTGGAAAAGAAACCACCCTCTGACGGTGTAGTGAGAACCACGGCCTCAC
AAACCTTCTAGGCATGGGGTCTTGTCAATCTAGGGCTGTTGCAAGGCAGTCCCCACAAAA
AGTGAGTCTTGTCGGCAGGCAATGCATCCTGCAAGCACAACATCAACTAGCAAGAGCAAG
AGCTCGTTGGAGGGGAGCTTCCCCCCGACAACACATCTTCCCGGCAAGACAAGACCCGGC
AAGCCAAAGCCGGCAAAACTAGACTTCCAGATGGGCCGACAAGCTCCCTACCACCTCTGC
ACACACACCGTCCTGGACACATGGTGCGCACGCAGAACTCTGTCGACAAGTGGCAGACGC
GCAGTCGATTAGGTAGAGCATGTCGGCTACGTGCCGGACCACCGCCCCAGAATCAACTTT
ATCGACACACGTCCCTGTATGTGTCGTCACCAGCATTCACCCCATGTAATTACCATTTTA
GCCATTGTGGTGTCCCCTTAGTCTATAAGAGAAGGCTCATGGGGACCTTTAAAGGGGGGA
ATCCAAGTCCCCTTAGTCCTACCTCTTCCTCCTTTGCGCGGAAGATTTCACCTCTCTTCT
GAACAACTATGGCGAAGCACAGGTGGATCGAGGCATCCGTGTAAGCTGCCGCTCGCCCTA
GATAAGTCACTTATTATTTGCGGACGACAGCCTCATATTCATGCAGGGGAAGGCTTCGAG
TGGACACCACCTGAATGACATCCTGCGAATTTACGATGAGTGCTCGGGAGAGTCTGTTAA
CAAGGAGAGGAGTTCCATGTGACAGCCTGAGACCGACGTTCTAGATGATTCCCCTTTATT
TCCGTTTCCGTNNNNNNNNNNNNNNNNNNNNNNNNNTCATCATCGCATCATGAGCATCAT
ATGCAT