Contig Data
morexGenes
Links



Map Locations of contig_1560516 (5010 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1560516

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11158 2 1549 bp AK252536.1 Available Available None





CDS Structure of MLOC_11158






Contig Sequence (5010 bp)

>contig_1560516 5010 assembly3_WGSMorex_rbca.fasta
ATGCAACGTTCCCCAACACTTCCCCGCGCGAGAGGCCGCAAGAGGCTAAGGAAGACCCGA
TCTGAGATCGGTATCCAGACGACGCAATTGATGCTGACGCGCCAACTGATGGTACAAAAA
AATGTCAAATGCATTAGTAGGGGTTCCAGCATAGCTGGAAGTCTCACAGCGGTGGTTGCA
CATGTAATTTACCCAGGTCCAAGCCTCCGGAGATAATACCCTACATCCTGCTTGTGTTTG
CTATTTACGGGTGGGGGATATCTCATGTGAGGGGTTTCCAATGGTGTGTATAGATGACTA
CCGAGAGTTGTTTCTACGGGAGTACATGGGAACGAGAGCTCCCTAGCCTCGCCTTGTATG
CTCGATGAGGCTAGAGTTTTACATAGAGATTTTTTGTCTAGGGTTGTCACCGCACCAACT
TGGAGGTTAAGTTGATCGCGTGACATTTATCTTCTTCTTCAGGCTCACCTTTGTGACTGG
CCCCGGGGGCCCTCTAGTAGGCCTTTTGACGGTCTCCCCTTTGTCGTTGGGCCTTGTGGG
CTCTCTCGCAGGCCTTTTGTCCGGTTTCCCTCGATTAGCCACCACCGGTGTATGACATCG
TTGCCATCAATAGTTTGCACCACACTTCAAACAATCTATACGTTCAAAGAAAATAACCAA
TACTCAAATAACACCAAATTAGATCCAACAACAAATAAATAAATAAAACTCCAAAAATAG
AAGCATATTAGTAGGTATATACCGTCTACATGATAATAGGATCACATAGCAAAAGGAAAC
AAGTAAATTGGATAAACGATTCAAAAGATATGTCCTATGGAAGGTTAAATTCAAATTTGA
ATTTTGCTGAAGTGTGAAATTTGGGAGCTACATGATTCTCCTCGTGAATACGAGTACACA
CCATATACGGATAAAGTGCTAGATTAAAATTGACTAAAAATATGTCAAAACTATGCCATG
TAAGCGATTTGAGCTGTTATTGTGGCTGCTGAGAATTTGTCACGTGGCACGAGGGATTTT
GCTAGTGCCGTCTCACCTCTCAGCATCGCCCCACCATATGGAACCCATGACTTGTACGAC
TAGTGGTTATCAACCACACATGCCTCTGTGACAAGTCTTCGAAAGGAATTAGGATTGCAC
TTTCGGCGTGGACTATTTGGAAGCATCATAATGCTTGCATCTTTGAGGGCACTCAACCAT
CACACACCCACCTAGTAAACACCATCCAATAGGACGATCGCACCTGGGTCAAGGCTGGTG
ATCAAGGATTGAAGATGATCTTGCCTGTAATCTGATTTTGTGATTCTTGGGGCTAAACAT
CCCCATGTCTTCTGCTCAGCCGCGTCCTTGTCTGCAGATTGATACGCAATCTGTGTGTGT
GTGAAAATAAAACATTTACTTACTAGTGAAACTCCTTCAAGAAAATTCTGGAGGAATTTC
AACCCTTTTTGCAAGTAAATTACAACATTTAACTCAAAAAATATAGCAAAGGGCAGTATT
CACTTTTTAGTTAACTTTTGGACATTCACTATATAGCAAACTCGGAATGATAGGTTTGTA
CTGTACTGGTGTCAACTTTGAGAGGGCGCCAAAGTTGGATTTGTCTGCACATATAAAGGG
CTAAACGGAATGCCAGCTAGTGCTCGCGAGATAGAAACTGATAACACGGAACACATGGAT
CAAACCCCACGTTCTCAACACAGTGGCTAGCAAACCACGGGCGCATGCATATACTTACAT
CCGTTCTTGAGTTTATCTATATGAATAAAACATGCATCGATCCTTGAAACACTGAGAAAC
GTTGCATCACGAGAGAAGCCAGCACACAACAGAAAGCACGAGTGAACGGCATGCAGCAGG
GGAAAGCATCCAAAATGGAAAGCTGTATGCAGATGCAGATGCAGATGCAGCTATCTCTTC
CTGGCGTCGTTTCTGGTGCAGACACCAGACTGTTCACGCGCCCCTCAAGCCCTCAAGGCT
GCTGGTCCATAGATAAGCATGCTTGCATGGCCGGAGAGGTTTAGCAAGGGAACGTTGCCG
AGACGGCGAGTTCCAGGTGTAGTTGCGCCCAGTCTTTGCGTGAATTGGTGTGTCACGCAT
CGAGCCCTTTCTAGGATTTTAACACGAGCACTGCTTGTTTGCTTGGCTCTAGCGCACGTG
GAGACAAAAGTTGTTTCAGCAAAACAATGGAAAGATACATGCATGATGCTGAGGCTAAAG
CAAAACAAGAGTTCATACTGTACTGGCATCCCTCCCCGGGGTCCTATACTCCTATATAGA
GACCACCCTCCTGGTGCCCATCTCCCCACTCATCGCAATCACCTCTAAACTTCCAGATAA
AATATAGTGACCGATCGAGTTTGCAGTTTTGCTAAGGTAACACCTCTATCTTAGTTTGGT
TCTTGCATTTTACTCCTACGATTGAGCATTAACTGATCGACGGTACGTGCGTGCATGCAA
ACACAAACACAAACACAGGGTGATGGGGACCGAGAAAGGCGAGGAAGGAACGGGCGAGGA
GCGCGTGGAGGTGCGCACGGGGCCGAGGCCAGCGCTGCCGGCGCCGCAGCAGCGGGCGGT
GGACGAGTTCTGGAGGAAGCAGCAGGAGGAGATGGAGGCGACGGTGGACTTCAATGACCG
GATACTGCCCATGGCCCGCCTCAAGAGGGTCATCCGCGCCGAGGAGGACGGCATGATGAT
CGCCGCGGACACGCCGGCGTACCTGGCCAAGCTCTGCGAGCTCTTCGTGCAGGAGCTCGC
CTTGCGCGCCTGGGCGTGCGCCCAGTCCCACCACCGCCGCATCATACTCGACTCGGACAT
CGCCGAGGCCGTCGCCTACACCGAGTCCTACGACTTCCTCACCACCCTGCTCCTCGAGCA
CCAACGGGAGGCGCGGCTGGTCGGCCGTGCTACTGCTACGCCGGCCACGGCTCCGGCAAC
GGCGGCGAGGCTCATCACCAGGAAGCGCCACATGCCGGACCCGAATCCTCCGCGGCAGGT
GCATGGGGTGCGGATAATTCGTCCACGTGCGCTTCCTATCACGCCTACTCCGCCGCCGTT
GGACGTTCGCTACGTGCCGGTGCCGTTTCCGTTCCCCTCGGCGCCGATCGGAGCCACAGC
GACGGCGGAGGGGCTGATGATTCTCCCACCCATCAACCACGCGACCACGGGTCGCGCGTT
CTTCTTGGACCGGAACAGCGGCACTAGCTTCGAAGGTGAAAACTCTGCTGCTGAAACTAT
GGCATCTCCTCCTCAGGCAGGGCCGGCAGAAGCACTGGCGCTGCCCAGTGTCCATCCTGC
TGCTTACTACTTGTGCTCTTACCCGTTGACCAACGACGTTGAGGCCTTTGCCGTTGGCAA
CACTGATCCGATTGGCATCCCACCGGAGATTGTAGAGGGAAACGTCGTCGATGGCGACGG
CGACGGCGGACAGCAGCACCACCAGAGCGCAAACGTCGGTGGTCACCGCGAGAGTGTGGT
GGTGGAGGTGCAGCGAAGCAGTGATGTGCAGGATGCTGGTGCTGGCGGTGCAGGTGGGAT
GTTTCTGGAGGAGATCCTCATGGATGAAGACCTGCTGTTTCCCGACGCCGAGCTTTTCCC
GTTGGTGGGCGCTGCACCTGGTCCTGATCCGGAGGATTTCATCGTCGACCAAGATGTTCT
CGACGACGTCTTTGCCAACCCGAGCAGCAGCACTGGCAGCGACTGAACAGAAAGGAGATC
AGAGCGGGACGCAGCGTCGTTTGATTCATCTGTCCTCTCCCGACATTACTACATATGCCA
GCCGCTATGTATCAAATTTGGGAATAAGTTTGTGTTCGTGCGTGTGACGTGGAACTGTAT
GGTTCGCCCGGAATTTATCGTATTGCAATATATATAAGGGATGCTACTCATTCACCAGTC
CGTCATCGACGACCATCCGATCTAGACGTACCGTTCAATCTACAGGGCGCGGGGCACGGA
TCGGGCACCTAATAATTTCTAAAACGACGGTCGAGTTGCACAAACAATCACTTTGTTGTA
AAAAAGCTTCGGACCCATTAATTCCTGAAATAAAAGTCGAGTTACAGAAAAACCGCTTTG
TTGCGGAATTTTTTCTATGCCTTGGATTTTTCTTTGCAACAAAGGTCATGTTGCAGAAAA
CTTTTACAACATAGGTGAGGTTGCAGAATTTTTTTTGTCTTCGCCTTTATGCAACATAGG
TATTGTTGTGTCGTGTTCATGCAGCAAGTCATTCGTTGCAAAAAAATGCAATATACATTA
TGTTGCGAAAATTTGTCGCTGCACACCCGGTCGGAATGACCCGCCGCCGTCACAGCGAGC
TCCTTGACCCGCCCATGGCTGGCCGTCCTCCCCACGGCGAGCTCCACTACGTCGTCCTTC
CAGCGCAGTCTGCACGCCTTGACCCATGTCGTGGCCCTTGCATGCCTTCAAGGTGCACAC
ATGGTTGGTTGTCCTTCCAGCGCGGTCTGCATGCAGCAACCTTGCTATGGCCCTTGCATG
CCTTCAAGCAATACACGTGGGAGAGAGGAGAAGCTATGGGAGGAGCGGCACTCGTGGAGC
GAGGCGAAGAAGATGGTTGCTGCGAGGTGGGCCTTGACAAGAGGTGGATCTGGTGGCGGC
GTTTGTCGGGAAGTACTACCTGTCGCTCGCTGCAGCAGGGAACTCCTACCCGCCACTCGC
GGAAAACGTTATTTGTTGTGTTTTGCATCAAGAAGTCGCGGCTTCCACAGGGAGTGACGC
GATATGGGCCGGTCCATTACTGTTGCGGGGATCCTGATTTTGGGAACCTTCTAGACTTTC
CCAGCCGATTTTTTCGGTTTTGGAAAATTTCTACAAGGTTCCCTGACCCGGTTTTTCTTT
TTTTGTTTCCTTGTTTCATTATTATTATTTTTTCTGTTTTCAAAATGTTTTTGATTTTCA
AAAAATGTTTTAGATTTTCAAAAAATGTTTGGGATTTTCGAAAATTGTTGTGATCAATTA
TCAAAACCATCCTAGGGAGCAATTGTGCTT