Contig Data
morexGenes
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Map Locations of contig_1560377 (1912 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1560377

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11097 4 1073 bp MLOC_11097.2 Available Available LOC_Os02g17780.1, FRAME:-2, EVALUE:3e-163, 13102.m01986 protein ent-kaurene synthase, chloroplast precursor, putative, expressed





CDS Structure of MLOC_11097






Contig Sequence (1912 bp)

>contig_1560377 1912 assembly3_WGSMorex_rbca.fasta
GCGACGACACATGTGAGTTCGTCGGACTGGTTTGTGCCCCGGACCCGGTATGTGGCTCGG
TCAGGGTCTTCGGCTTTAGATGTTAGGCTTAGATGAGAGGTGTGGATATTTGGTCCAGCT
TGCACCCCTTCATCATATGGATAGGAGTAACGAGAGATGTTGCCAAGATGACGGATTTAG
GCACATTGTTGTACTGCCTTGTAAAGTCCTCGAGAATAATTAATAAAATGACCGCATGCA
GAGACCGAGGGTCATCCTCTTTTTCAAAAAAAAATATATAAGGTTATTTTGTTTCGGTGT
TTAAAATAGTTATCTATTGTGATATCAACTGCAATCCCTCCCTAGGTACGGTGTGGAGAG
CTACATTAATTCTTTACATCCCATCAATTCTATCTAAAGTAATTGATTCGTAGGATGGAG
GTGTTTGCTTACGTACCTCGCCTGGTAGATCCTTTGAAATGATCCATTTGTCTCGGATCG
CGCCCTGGGCCTCCCTTTCTCTAAGGAACTCATAGGAGAATCTCCCAGCACGCTCCAGCA
CGTCCTCTCCGGGAAATCTTACCTGAGAGGCCCTGTTCAGGTTGTACATCCCAGTTACCG
CCTGTGTTGATTGCCCCACGAAACAGAAGAACTCCCCATCCTTCTCAAAGTTGTCGAACA
CACCTGCGGATGGGCATCGGTGTTCTTTGTGACGCGACGTAAAAAAATTACACACGCTCG
TCGGGAGAGAATGCACAACATGACAGCACCACTATCTTGATTTAGAAGACGGAAAACTAT
GGTTCGTACTTGCGGATACGTTGTAACGGTGCAGCCGCAGCAGCCTGAACGCCATGGATG
TGTCATCCACGTCTATTACTGTGGAGTTCCTCGCCCAGCATATCCCCCCCTCACTCCAGT
GCCTACAACATATATACACGAGTACAGAGGTCGTTAGAAGAAACTTTGGTCATGGAGGGA
GAAGAGGTTTGAGGTCAGGACACCGATCAATGTTTAGCAAAACCCCGGTTATGATGGAGG
AATCAAACCTGTGGACATAGTCCAAGCACTGTTTGATTTCTTGCTTGAAGTAGCGCGAGA
TCCCAAGGCGCTCCAACCGATCGACGGCCCAGATGTGCTCGAAGAGATCGACCGGGTAAA
CATTGGGAACTGAAAAATGCATGGTCAGAGTCAGACAAGATGAACAATGTACTGCATGCA
ATCCAACACCAGTGCTGCATGCATCGAACCGAACGGGTTTCATTCGTCCATCTCTTACCC
CCTCCGTCGAATTTCTTCACGATCCTGTCTATATACTCGAAGCATTTTGTGTCACCGGTC
TGCATGAGGGCAGAGGCTGTAGCCGAGGGGGAAAACAGGATGGACCCATCGCTGGACTGG
AGCCTGAGGATCTTGCGCCAGTCCACCCCGGGCATCCCTTCAAGGGAGTGCAGTATCGTC
GTCGGAATGCTGTGCATCATCTCCATCGGAATCCTGCGGCAAATCAATCAACAATGTACT
GTAGTTCATTGCACAAAAGCCCGGTCGATCTCCATCCATATGGAAACGAATTGAAGCAGG
CAAAGGCGCTGCACTTGTCTAGGAGGATATGTACTTGTTGAGCTTCACTTCTCTGTTGGC
ATATATGCGCTGCAGAGCATGGTGGTCATACGGGAACACAACGTCCAACCTCCTGGCCGC
CTCAAGGAGAGAAGGGAAGGCGATCTCGAAGCCGATGGGCATCGACTCCGAGTCCTCCTC
GGCCAGCCTCCACATGTTGTCCTCCAGAAAAACCAGCCCTGATCGATCGAGTAAACAAAA
CAAGACAAGATGCATGCATCACACCTTCAGTTTCACCAAACGCAATGCTGGTTCAGTGGG
TTTTTTTTTTTTTTTTTTTNNNNNTTTTTTTTTTTTTTGGGTTTGGTTTTTT