Contig Data
morexGenes
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Map Locations of contig_1560250 (3170 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1560250

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_11047 1 145 bp None Available Available None
MLOC_11046 2 1649 bp AK354763 Available Available None





CDS Structure of MLOC_11047






CDS Structure of MLOC_11046






Contig Sequence (3170 bp)

>contig_1560250 3170 assembly3_WGSMorex_rbca.fasta
AGCCACGGCCGCGGCCGCGGGGGTGGGCGCGCCGACGAGGGGGGGCGGGCGGGGCGCGCC
GGTCGCGCGGCCGCCGCTCCGGGAGGCCGGCTCGACGCCCTCGATGCCGCCGATGCTCCA
GGAGCCCGGGTCGAGGCCTAGGCCCTACATGCCGTCCCTCTGCTCCACGCCCCGCAACCC
TGCCGTCAAGTGCTATGTGAGTCCCCGATCGATCCCGTTCCCCCACTTCGTTTGTGTTGT
CCTGTGCGCGCGCGCGCGCGCGCGCTGGCCGTTCGACGGAATGGCTGAACGGGTGTGAAT
CTGCTTGTTTGTCTGGCAGGGCGACAGGTTCATCCCGGACAGGTCGGCGATGGACATGGA
CATGGCGCACTACCTCCTGACGGAGCCGAGGAAGGACAGCAAGAACGCGGTGACGCCGTC
GCCGGCCAAGGAGGCGTACCGGAAGCTGCTGGCGGAGAAGCTGCTCAACAACCGCACCAG
GATTCTCGCTTTCAGGAACAAGCCGCCGGAGCCTGAGAACAGCATGCTCATGGAGCTCCA
TGCTGATGCGGCCTCCATCCAGGCCAGACCGGTGAAGAAGCGTCGATACATCCCTCAGGT
ACGGCACGCTTTGTTGAATTGTTGTGGCATTGCTCTCATTAGTGTTGCAGTTGTAGTGCT
CACTGACTGGTGATGATTAATGACTTGATGTACATTGCAAACCTGATGCAGTCCGCAGAG
AGGACTCTGGATGCGCCAGACATCGTTGACGATTACTACCTCAACCTGCTGGACTGGGGA
AGCGCCAATGTGCTGTCCATTGCACTGGGGAACACGGTATACCTCTGGGACGCTGCAAGT
GGGTCTACATCCGAGCTTGTTACCATTGGTGAGGACGATGGCCCTGTCACTAGTGTTAGC
TGGGCTCCTGATGGCAACCACATTGCTATTGGCCTCAACTCCTCAGCCGTCCAGATCTGG
GATTCTAGCTCTAGCCAACTGGTTGGTACTTCTTGGCCTCTCTCTCCTGTTCATTCTCTA
TTAGCAACATCATTCGTGTTGTTTAGTTGCTGATCACGATTCATTCAACATTGTTCGGGT
TTTTAGTTGCTGATCATGATTCATTGTGCAGCTGAGGACACTGCAAGGTGTGCATGAGTT
GAGAGTCGGTTCACTGGCGTGGAACAAGAACATCCTGACCGCTGGTGGTATGGACGGCAA
GATTGTGAACAATGATTTGAGGATTAGGAACCATGCTGTGCAGACATACCGCGGGCACGA
GCAGGAGGTGTGTGGCCTCAAATGGTCCGGATCAGGGCAGCAGCTGGCCAGTGGTGGCAA
TGACAACCTCCTCCACATATGGGATGTGTCTATGGCATCCACTGCACAATCTGCAGGCCG
CACCCAATGGTTACACAGGATGGAAGACCACTCAGCTGCTGTGAAGGCGCTTGCATGGTG
CCCGTTCCAGAGCAACCTGCTGGCATCAGGTGGTGGCGCAAATGACCGTTGCATCAAGTT
CTGGAACACACACACGGGCGCATGCCTCAACTCAGTCGACACCGGGTCACAAGTGTGCGC
ACTGCTCTGGAACAAGAACGACAGAGAGCTGTTGAGCTCGCATGGATTCACTCAGAACCA
GCTCACGTTGTGGAAGTACCCGTCGATGACTAAGATGGCCGAGCTCAATGGCCATACTTC
CCGTGTCCTCTTCATGGCTCAGGTAATCTTTTTGCCCCATATATGCTTTGTAGCTAAGTT
TGAAACGCATATTGCGTGCACAGATGGATGGCTTATGGTTGTGCTTTGTTGAACCTTTGT
AGAGCCCTGATGGTTGCACGGTGGCATCTGCGGCCGCAGACGAGACCCTGCGCTTCTGGA
ATGTGTTTGGGACTCCTGATGCTCCCAAGTCTGCAGTGAAAGTGAAGACCCCCCAGAGCA
GAATGTTCAACAGTTACAATCACCTACGCTAGGGAGGGATCAGGTCCCGGCAAGTGCTGC
AACGCTGACAAGAATTAGCAGGCTGATTTTACGTAGAAATTCTTTGTGTGTACTGAAGTG
TTTTGTGCGTGCTTCAGTATGCTGGTAACTTTAGTTGGTATATTTTACATTGATCCGGAT
GAACATCAAGACCAGTTTGATGTATGTTATACATACATATGTCGATTATATATAAGTATA
ATGACATTGGTGTTTTTTTATCAACTGTTGTTGCCTCACAAACTATGCTCTCTTGCTTCT
GATGTTCCCTGTTGACTGGTTTTGATGTTGACGTGGGGTCTGGAGGGTGCTTCTCTTTTG
GTTGCCTTCTTTATGCAACTTGAGGTGCCTCTCTGTTGGTTGCTTTCTTTATGCAACTTG
AAGCCACCACCAGTTGTGACCACTATTTTATCATGTACTCCTCTGTACCGAAATATTTGT
AGTTTTAGTAGGTACAGAGGGAGTAGTAGTGTAATTCTTTTCGGGAAATACACGGACCTG
CTTCTGCAATGGAACCTGTGTGTGTACTCCGGGCCTAGCAAAAATGGAACAGAGTTTCAC
ATCCAGGTTAGATGTGTTTTGTGAGCTTGAGATGTCGGAGGATCTTCTGTCTTGTGCCAA
GTTTGGAGTGGCAAACCATATGTTACCCTCTTATGCTTCTTTCAGTCAAAGAAATGCATC
TCGGTGGTTGGTTGGTTCAGTGTCAGATGACGCTTGTGCCCATCAGATTACAAGATTACA
ACCAAACATTCGCAAAATTAGATTAGCAGTGCCTTTACCCCATGAGATTACCAGTGAGAT
TTACCATTTCCTCAACCAAAAGTAGCACCACAGTAAAAGATTAGCGGCGCATTGACACAG
GCTGTGGTACCGGTGCGTTTGCAGCCGGTGCCATATCGGCCGTCAGATCTCACCGGAGTC
GATCCTGGCCGTCCGATGGTAGCACACATGTGGCTCCTCTCCCTGCCTACCCACCGGCCA
TCACCACCACCAAAAGTGGCCCTTTCGCCCACCTCGCCGCCCACTCCCTCTGCTCCCCTC
CCTCCCCGCACGCGCGCGCCCTCCGCCCGGCAGGCCGACGACCTCGCCGTCGAGGTGGCC
GCCGTCCGCCGCGAGGGCCCGCCGCTCCCCGGGCGCGGGGGGGCCGCCGGCGGCACCGCC
GCGCCCGCCTCCCCCCCCCCCACACCGAACAGCGCCACCCCGCCCGCTGG