Contig Data
morexGenes
Links



Map Locations of contig_1560150 (4329 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1560150

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10984 1 1026 bp MLOC_10984.1 Available Available None





CDS Structure of MLOC_10984






Contig Sequence (4329 bp)

>contig_1560150 4329 assembly3_WGSMorex_rbca.fasta
TCACCCAGTGACAAAGTAGGGGTCGCGAGGCACGTATTGCATTGTTCCCATCAAAGTTAA
AAAGATGGGGTTTTCATCATNNNNNNNNNNNNNATCCCTCTACATCATGGCATCTTACCT
ACAGTGTTACTTTGTTCTTCATGAACTTNNNNNNNNNNNNNNNNGCAAGAGTCGGTCGAT
GTGTGGAGTATTAGTAGTAGATGCAACATCGTTTCGGTCTACTTGACATGGATGCGATGC
CTATATGGATATTCATTGCCTTAGATATCTTCATAATTATTCGCTTTTCTATCAATTGTT
GGACAGTAATTTGTTTACCCATCGCATTTTTTCCTTCATGAGAGAAGCCTGTAGTGAAAC
CTATGTCCCCCTCGTCTATTTTCCATATTATACTTTNNNNNNNNNNNNNCAAAAATACCA
AAAATATATTGCTGACATTTATTTACTTTTTTCTTACTTTTCGTTCTAGCAATCTTTTAT
ATCTATCTCTATCAGATCTCATCATTGCAAATAACCGTGAAGGGATTGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTGTTTGATTGTTTGTGTAGGTGCGGAAATTGGGGCCTTGCTTGT
TCCTCCTNNNNNNNNNNNNNNNNNNNNNNCAACAAAATGAGGGAAATACTTATACAAAAT
GAGGGAAATACTTATGTACGTTGTTGCATCACCCTTTCCTCTTCAAGGGAATACCAACGC
AACATCAAGAAGTAGCAAGCCTCTAAGCATGGGGATGATTCCACTCAATGACACTATTAC
TATGAAGTGTGGATGCAAAGGGCGATTTTTTATTGCACATGCAGTTCGAGCCTCACTTGG
GCAACCATGTATGTGGGGCTAATAGGTACTAGAATGAAACCGGCATCCCATGATGTATGC
GATCAGTAAAAAGGAAAGAAATCCCACAATAGTTAGATGATGTGTGTATGTGTTACTACC
AATGTGATCAAATAAGACGGATGAGATACTGGTCAAAGCCATTTTCTACATATTGAACAC
AAGCGACAAATATGTTGTATAGAGATGTGTCAAATATGACGTGTGTGCGATTATGGATTG
TGCATCGTGACAAAGACCAACACCTTAATTTATGTTCATCCTCATCTTTGACCAGTTCAC
ACAATCTCGGATGAAATGGAACATGACACATTCAACACTTCGCGTTCCATGGATAGAGGA
GTTGGAGACATGCACACAATACAAGACCGCCAACAAACCTTGCGGTAATCTCTGCCTCTA
GCCACTACAAGTATTGACAGTCATCAAATTCCTCATCTTAGTATGGTCTACCAATGTGGA
GAGGAATTACATAATGACTACAGGTAGAAACAAGGGGGTGAACGCCGGTTTTGGTAGTAA
TGCTAAGAGTGAGATGGTTCCATCCATGAAAATGCCTCCTTTGGTTATCTCATAGATCTT
CGGGAAGTATGGAGGATTTGTATCGAAAGTGCTTAACATCATATTTTATAAATTAAAAAA
GATAATGAATCTAGACTTTTACACATGAAAGTATGTCAAACAACAATATGTAGCTCATTG
ATTTCATATGTCGAAGAAATAGGAAATATTGTTGAAGCCTCTTATTTGTTACTCCTTCCG
TTTCATCTCCCACTGATTTCTAGCATAATGGAAAATAACCCATATGCATGCACATGCCCT
AGGTCCTTTTCGTCTTGACAACACTGAGCTCCAACTCCTTGCGCTTGACCTGCAAACTAA
GTCGGTAGTTCTGTAGACGCATCTTCTCATTCTGCAACCGCATCTTCTTCAACTCCATTT
CCTCCATCAGGTCTTCTGTGGCCCAGCGCAATCGCTTCTCTGCCACCTCCAGTATCTCGT
TCTCTAGTGCTTTCTTCTTGTTCACGAGTGAGAGCAACCAGTATGGAGGGTTGGAGCACA
TACCATCCTCGGCAGGGGGTGCGATGGGATGAGGGTTGTCGTGGTCGTCGTCTTGCTTGT
GTGGCACCTCATTGATGTCGATGGAAAGATGGCGGCGCCGCGTGCTCTCTCTAGCTTCAT
CGCCACCATGGTCTTCATGGTTGACTATTTGCTTGCCCTTGAAATTTCTCTGCTGTGCCT
GATGCAACGACGCTCCCTTACATCGATAGCTAAGCTGCTCATCATGGTCGCTTGGTGCTG
AGCGCTTGATGCCAATGGCAGAGATGGGTGCCATCAGATCTATGGTGGTCGGCAGTGTGT
TGTGATGAAACTGGGGTTGCAAGGGCTAAGGCGTTCCTACGGCTGGAGGTATGCTAGTAG
TTAAATAGATGGGGGATGGGTGGCCCTCACCTAACTTCTTTGTTCTCTTATACTTCATTT
CACTCCTCAAATAGCAACCAAACAATTATGTTGGCTCAGTTAGTTGTCTTTATTTTTTGG
GTCATACTTGAGCTGGAATATATTTGGCTCGGGTTGCACATGCGGTAAGTTTCCCTTCTC
CTACTCCTAGTTTTGAAAGAATGATAGTGGTGGAGGATGCCCAACAATTGCAAAGTGACG
GGGACTTCCAAATTGCATGAAAAATGGTCGCGACTGCTTCATGTCAAAGTTTTTCAAGAA
TTTGTAGGAAATATAACATATATGCATTTTCTAACATGTAAAATGAAAAAAAATGCGTTA
ATAATGGAAGTTATAAGAGCATATTTGCAATGAGTCCTGTCACATATAAGATTCAAGACT
ACATTTTCAAATATATGAAAAAACTATGGTTGTAATGCGCATCCACAACACTGAAACAAG
AAACAAAGAAAATGAAAAATTGTATCATGCATACTACATCAAAGAATTCTTATATTATCA
GATAATGCGATATGGGTCAAATATATTTACTACATCATGAGTACAAGCAACAAAGATGAC
TCACATGTGTCCGTTAAGTGTCATATGTGCGTGGTTTATAATTGTACATCACCACAAAAA
CTGACATCTTACTCTAACTTCCTCTTTTACTTGGTTCACTTCAAACCCTCTCAAAGTACA
TAGATGATAGCACATTCGAAGTCTCTCTTGTCATCTATAATGAAGAAGAAACCAAAGATG
TAATAGTCAACCATATTGGAACTGTTTTTTAATATATTACAAACTGTGTCATATACAATA
AACTAAATAATTATATTCAATGTGTTACCCCAATCGCCACCCCAAAGCATCAAAGTTTGA
ATATCTTCCAACAATTCGTAGTATTCTAAAAATACTTTGTAACACCAGCAAAAAATATAG
TCTCACAATGATAATTCAGCCCTTTCAACAAATACTTTCCATTTTCACATTGGTTATGAA
ACTTATTGCTTTTGTTGATATTGCTGTTGTGGATTATCTATAAGTTATAGATGGAATAAT
TCACCAAAAACATTATGTACTATAGGGTTTCTTACATCTAAGCATAATCACATTTCACCA
CCGAATTATTGTCCAAGTAATTTAATCAGGTCTTAGTAGGAAAATGGTCAAATCACCCCC
TTTACGCCCCAACTATACAAACTAGAAATCTCCGAAAGTGTAAATCAAGAATGTGGATCG
AGCATATTTTGGAAATATGTGGATATGTTATTAATGATACAGATTACAAAGATATGTATC
AAACATATCTTGGACATTTATTTGCCATCAATTACTCTAGGGCATATTAGAAATAGCAAA
TTGAAAATACAACATACTTTTAATGACATGAGTTATTGTGCTATAGAATACAAATAAGGA
AATAAAGTAGATTTCCAATTTATAACCAATAATTAATGTGGATGTACAAATATGTAGATC
GAGAAGATTTATGAAATTAATTGCCATTATTTATTCTGGGTATAGACTAGAACTATGTGA
AATCATGAATACTTAGGGAATATAGTTAATAGTACATGCAGAATAATCGTATAAATAATG
TTGGAGTACCCACCTTCCTAGGCTTGTCAAACACAAGATGGCCCTCTTGGTCATCCGTTG
CTAGCTGGCATGACACAAGAGCCTTTTGCGGAGGATGCAAGTCATCTGATTTGTTTGGAC
GAGTCACACCTGAGCATCCTAATACCTCTCAAATGTATCTATAATTTTTNNNNGTTCCAT
GCTAATATATTATCATTCCAGAATACTTTTGGGGTATTTATTTACGAGTTTATATTATAT
TTGAGCACAAACCTATTGACCCAGTGCCCAATGCCATTCGTTGTTTTCTACGTGTTTTTT
ACTTTTCAAGTTTTCCATACGAAACGAAGTCCAATTGCCATGAAACTTTTTGTTGATTTT
TATGGACCAAAAGAAGACGAACGAGCATCGGAAGAAGGCTGGAGGCCTCATGAGGGCACA
ACAAGCCAA