| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1560090
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_10958 |
1 |
2750 bp |
MLOC_10958.1 |
Available |
Available |
LOC_Os02g57290.4, FRAME:-3, EVALUE:3e-39, 13102.m06603 protein cytochrome P450, putative, expressed |
| MLOC_10974 |
4 |
4228 bp |
MLOC_10974.2 |
Available |
Available |
LOC_Os03g12620.1, FRAME:-3, EVALUE:0.0, 13103.m01447 protein glycosyl hydrolases family 17, putative, expressed |
| MLOC_10957 |
3 |
1930 bp |
MLOC_10957.1 |
Available |
Available |
LOC_Os02g57280.1, FRAME:+2, EVALUE:2e-84, 13102.m06592 protein CBS domain containing membrane protein, putative, expressed |
CDS Structure of MLOC_10958
CDS Structure of MLOC_10974
CDS Structure of MLOC_10957
Contig Sequence (4124 bp)
>contig_1560090 4124 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCGCCCGCCCCGCCGCGCCCCCGCCGCCCGCCGGGCCCCGCTCCGGCGGGCCA
CCGTTCCGAGGGGAAGCACCGCGTGTCCGGGAAACTCCACGTCAATCCACATCCGAGGAC
CAGAGATTCCGGGCAGGGACAAAAAAAACGCTCCAAGCCAACTTGCGATCAGATTCAGAC
TTCGGAGTTAGGTGCATATCCAGATCCATCACCCCTCATCCAGCCTCCATGAAATTCCCC
ACCCCACCCCACCCCACCCCAGCCCAGGGGTTAAAACGCCGTGATCAACCGTCCAGCTCC
AGCCACTCTTTGTCCCAAGGAATTCACTGCCATGATTCTACCTAGCTGAAGCGCACTGAT
CACACAGATATTTAGGCCTGTCAGCAGGCTCATCGGTCGCCAAGTCAAAGTGGGGATCTC
ACTGCCCGGCAGCACCAGTCACTCGCCCGCTGGTGGGCCCTCCCCATGCAAGCATGCCCA
TCCAGCTCAGCTCACTGACAATGGACATGGCAGCACCTCCAGCTTCACCCTCCTTATAAA
ATGGAGCCCTCCTCCTCCTGGGATCTGCAGGACAACACAGTCAGACAACATCCACAACAC
AAGACAAGGAGAATAGCATCCATGGCGTGCATCAATACCTTGCAGAGCTGCTCCATGTTC
AAGGGGGCCAAGGCCGAGGCCAGAAGGGGCAGCAGAGCCGGCAGCGGCGGGAGCTTCGGG
TGCCGGGCGTCCACGTTCATGGACGGGAGCGGGCTCCGGCTCGGGCTCGACGAGAACCCC
GACGCCATCATCTCCGGCGAGTGGCCCGAGAACTTCTCCCTCCTCAGCTACGACGACCTC
CGCGCATACCTCCAGTCCCAGTCCCAGCAGCAGCAGCAGCAGCAGCAACCACCTTCCCAC
GCCGGCGATCAGGTGCTTCTTCTTGCTGGTCCTGTAGTCTCTGTCCATCTCCTCTCTTGA
TTGGTGCTTCTTCTTCCTGCTGATCTTGTAGTCTCTGTCATCTCCTATCTTGGTGGTGCT
TCTTCTTCTTGAACTCTTGCTTGACTTCGAACCTTGTTGCTTGGTTGGTTGCAGCACCGA
GGGGCGCTCCTGCGCGAGGCCATGTCGACGCCCGTGCTGATGGCCACAGCGGACCAGGCA
CTGGTGGAGGTTGAAGGACACTTCCAGCTCGTGTCAGGCCTCCCGGTTGTCGACAGCGCC
CGCCGATGTGTCGGGGTCGTCGTCAAGAGCGATCGCGCGAGGGCTTCACATGGGGTCAGC
TCAGCTCCTCCCCCTTCTCTCTTCATCTGTTTTACACACAACTCTTGCCGCCTTTCGGAC
CGGGAGAAGAAGAAGAAAAAGACAGCTAATATACAAGTTGCTACATCAACAATATCACCA
CCATCTTGTGTTTGCTAATCTAGTTCCTATTTGCTGCAACAGTCAAGGACGAAGATTGCA
GATGTGATGACATCTCCAGCAATCACGCTATCATGCGATAAAACAGTGACCGGTAATTGT
TGTTCCCACTCATCATTTTTTTCCATATTCGTTTCCAGTTAATTTAATAGTGCACAATCG
TGTGATGCCAACAGATGCCGCAGCTCTGATGCTCAAGAAGAAGATCCACAGATTACCGAT
AGTAAACCAGGACAATCAAGTAATAGGTGAGTAACAGAAAACACGACAAAACCAGCAGCA
AAGGACTTTTATATACTACTAGATCTGTATCATCCCCTTAACATCGACTATTATTTGGAG
CAAGTTTCAAGCTAAACGGAATTTATTCTAAACAATGCTAACAGGTATAGTTACCCGCGA
TGACGTTCTTCGCGCGTTGGAGGCCATGCTGAAGTTTTAGAGGCGCAGGAGTCCATGCCC
GGTACTTGTGGATCTGTAAATATGTGTGTCCGCGGTACTTTTGAGTAGCAGGCAGATCCT
ATAGATGTAAAAGTGTTTGTAGCCTGTATCGCAAAAATATGCCTGGGAGCATTTAGGAGA
GCTTTTCCTTGTAAAGAAGCACGCCAGGAAGATTCTGTTCTGTACTGTACTGTTTGGTAT
CTGCGCATGAAAACGTTCCCATGAGCAATGACTTCCACATTACACAGCAAGAAAAATAAA
AGCTCATTGTAATATTTGAGAAGAATGGAGGCAATATGCTTTAAAAAGGTTATGCCTGAA
TTGATCATGGAATATAATTAGGGGTGCGGCCACGTATCTTCATACTTCATAGACAATGAT
GATATATCATTACGGTTTCCAGAAGCAGTACAATAGTTTTATCACCAAAGATGCATAGCA
CGATGTAATTTACTAAATAGAATATATGACTTCATGATTAACAACGACAAGTGCAAACGA
AGTTCCTTTGCCATAGCCACTTAACAGACGAGGACTATATGCCTTGGAGGACTTCATTTT
TTGAAGAAAAAGCAGTGCCTTTTATTTATTGGGCATACAAGATCTTTGAGCACTTAAGGT
AAATGAAGTGTGCCATGCGAAAACTACAGCAGGACAATGTAATTTACTAAATAAAATATA
TGACCTCATGATTAACAACAAGAAGTGCAAACAAAGTTTCTTTGCCCTAGACACTCAACA
GACAAGGACTATATGCCTTTATTTATTGGACATACAACATCTTTGAGCACTTCAGGTAAA
TAAAGTGTGTCACACGAAAACTACAGAAGGACAATGCAAGAGAAAGGAGGGGGAAGGCAA
ATGAATGCCCATACCAGAGAATATAACCAATTCAAATGTGAAGGAACTATAACTATTTAA
ATTTCCAAGTAGAACTGAGATGAGAACGTACTCATTATGTATCTCATTGCAATCTGAGCA
TCAAAAATGATAAATCACACTTGACTTGTCGACACCTCCACTTGTTGACCTTCTCCGGAT
GCAATACTAGCAGTAGAAACAGCCACTGACGCAGTAGAACTTGTGCTTCCTTCTGAATCG
GAAACGATTTTCATCTCTAAGTTTGGAATTACAGGTGGCTTTATCCTCCGAGTAACAGTC
ATGTTCAGTCCCTTAGTTGTGTGAATCGTTGCTCCGGTTGTCATCTCGACCTACAATAGA
GCTATGATAAATATATTTTATCAGCTATGATGAATCAGAAAGCTGGTGGGAAACATACCG
GAGGTGCTCCTGGAGCCATCTGAAAATCAAATCGCTTGACAAGCATTGCTGTTGCTACCA
CAGTCTGCACAGAAATTGCACAATGTAAGTAATTCTCCCAATAGGAACAAATGACTGTGG
GCAGTGCATCCCCTTGGTGCATAGGCTGGGATAGCAAAAAATCTTCGTTTTCACAAAAGA
AAGTCTCATATACCAAGAAGCCAAAAAAAGAAGCCCTTAATACGACTAAATCAAATTACT
AATAACCAGGAAACTTCATGAAATTGCAAAATGCTAGTTCGATATTATCAGCTGCAAACC
CCAAATAATCAAAATGGATTACCTCAAAAGTAGCAAACATATCACCTACACATTTCCTTG
GTCCGCCACCAAATGGCAAGTAACTGAAAATTCAACAAGACTATATGAATACAATTGAGT
TATAACTTAAAGCAGGTTTGTTGGGCATTAGATAAACAGTGTAGCAAACAGATGCCACCA
CTATTCTGAAGAAGGAAAGCTACCGTAGTCACACAATGGATCTCTAAGATTTTGACAATA
GCAACTACGATCTCAAGGTTTTTGCTGTTGTTGTCGTTTATTTGAAGTATGTGCTACCAT
AAGACAGATATGAATACCACAGTAGTAATGGTGCTGATGTAAGTAACAGAACATAGTGAC
ACAGAGAACCAGAAGCCAAAAAAACACAAGAACGTAGATGTATTGCATTTTTGTTTTTAC
TAATTTCGAGTTTCAGTGGATGCTTAGAAGGCGACTTTTATCTACTAAATGGTGACTCAT
CACTTCTTTATCAACCAATCTCTAATATTTCAAATTGTTAGATTCATTGCAGCTGAAGAT
AACACATAATCCATACTCTTAGAATTAGAAATGTATCGCATGTCCATTATAATTTATCAC
CTGTTATGACCGGTACGACGTACCAACGGAGGAGGTCCAATGGGCAGGGTTAGTTACGGG
CTTAGCCCAAATTATCTTAGCTATCTTAGAGTCCAAGTTATATT
