Map Locations of contig_1559991 (3651 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1559991

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10889 1 1707 bp AK356100 Available Available None





CDS Structure of MLOC_10889






Contig Sequence (3651 bp)

>contig_1559991 3651 assembly3_WGSMorex_rbca.fasta
ATCCTTGATATGTTATAGTTCACCATGAAGCTCTAGTAGCTTGGTGGNNNNNNNNTTGGA
GAACCATCATTATCTCATCTGAAAGATTAACTCCCACTTGATTCAAACGACTGTTGCACT
CATATAATCTGAGCACATGCTCAACGATTGAGCTTTTCTCCTTTACTTTGCAAACAAAGA
ATTTTGTCGGAGGTCTCANNNNNNNNNNNNAGGGCATGAGCATGAAATCCCAATTTTATC
TATTGAAACATCTCATATATATAGAGGCAACCAAGCAACTTGATAACATAATTTTTTGCC
TCATTTTTTCGAAACCAGGCCCTGCTCAGTCTGACTCACAGACCCAATGGCACTGCTAGT
CACTGTAGACGCCTCGTCACCGATAAGTCGTCGATAAAACGTCTCTTTCCATTAAATACG
CATCAATGAAAATTCTAAAATAAATCTAAAAAAAATGCAAACATCAGGATTTGAAATCTG
ATGGGCTAAAGATATCAGCACCCAACCAGGTGTTGGTTCGCTCGTGTAAGATGCTCATTA
CTACGATAAGTTCTCATTAGTTCGGTGCGTACACACTATGCAGGTAAAGGAAACGTGGAG
CAAAATATGTGCCATCCGCCCATCCCCTTTCAAACAACTAAATCATCGTGTGTATTCGGA
AAGGGTGTTCGGTAAAGGAGTTACGTTGCATGGATTACACCATTCTGCTGAAAGGTGTAA
TACGCTGGCATATACTACTCCCTCCGTTCATAAATACTTAGTTGGGAAGAACTAGACTAG
TTCTCCCCGACTACAAGTATTTAGGTACATATGGAGTATAACTCAAGTCTCAAAAGAGGA
AACACAAAATTTTCAAAATAACTACTAATAAGGTTACAAATACATTACACTTAACATCAT
GATCGCATTTGATTTTTCTAGTTGCAATACTAGTGTCGTTTGATGCTGAAATACACTATG
CCAGACATTTGACCATGTAAGGCCCCTCAAGTTCGTAGCCCAGCTTGCGGTAGTAGTGGC
GGGTTCCAACTCCTGAGATGACGGCCAGTTTCTTTGATCGATGCTCCTTACGGGCAATTC
TTTCTGCTTCTTCCATCAGGAGTGTCCCATACCCCTGGAAATGGTGATGAATGGAACAAA
TGTTAGCCAGCTGAAACAATCTAGCAGCACAGCCATCGTAAAAATCTGAATAATTAACTG
AGAAGGGGTAACCAACAATTACACAATGATAAAAGTCTAAGCACGGCCATGCTTAGCAAG
TATTCATTCAATCACTGCACACTACACCTGTGGGTCCTGTTTTTTTTTACTATTTTGAGC
ACAGCATGTATTCCAAGCATGATCATTTGAGGACAACTACCACACATGGTTGTTCGAGTA
AGAGATTAACCTGGTGTTGAAGTTTCTCCGCATCACGACCATGCACAGGGACTGCTGTTC
CGTAGACATGAAGTTCACGGACAATTGAACACCTCCCTACAAGTTCAGGGCCTGTAACAT
TGCGGCCACATTTACGCAAGCGCAACAGGCCAATAAGGATATCCTGTAGAATTTAGAGAA
GGAAAATGTGTGAATAATGTTACACAAGATCAAAAGGATAAGAGACCCGGTGCTAAACTC
TATGCACCAGCAGCAATCTCAGGAGCATACTATACAAGCAGAACAATTTAAAAATTTCTT
GGTACAAGTGAAACCAATAAGGCAATAACTATGTGGATAAGTTAAAAAAAAAATCCCACC
CATGTAAAAGGAAATTGAGCATAATTAAGTGGAAAAAATATGCCTATTCAGGAACACAGC
ATAAACCATAGCATTTTTTCACATCCCAGCGGTGAAATGAATAGGCTGGCAAGCTGTTGA
GTACCTGTCTTGTATCCTCGTATGAGAGAAAGGTCTCCCAGCCATCATTTGCGGCATAAT
CACGCCTGACAAGCTCTACTTCATCAGGCCTGATCTTGTGATGGATATCCTGTGTGGAGA
AGCACAACGAGAACAATGAGGACATGTACTTCATCGATTATAAGCACATGGCAGTGACTT
CACAGAATCCCATATTTACCTGAATTCCAGCCTCACGGGTTCTGACATCTCTGCATTTCA
AGCCCAGGTCTTCCATTCGAGCCAAAGCAAGCTCACGCAGGTTACCTTTCTCGACACCAG
AAGTAACAAGAGGCATAGGGATATCTCTCTGGACCCGATAGACTCGTGTCCATGGTGGTA
CCATCGACAGAATCCTCGCTACAATATCCACTAGCAGCTCTGGTGGGTAGTTTCTATACC
TGCAACACAACAAATGTCACCAGTATATAAGTTCTCAATTCTCACTAAAACTTTAGAGAA
CCAAAAGACTGATCATAATATCAAGCAGGAAATAAAATATCAAGCGCTGGATAAATGTAA
TACCTTCCAGTTTTCCACAGCTCATAAAGACCAGTTCCACGAATCACAAGAGTTGGATAG
ATCTTTAGACCATCTGCTCGGAATGCTGGATTTTCAAAAAATTCTCTGAAACTTTCCATA
TCTCTCTCAACTCCAACATTAGGTAAATCTGGCATCATGTGCGCAACCACCTATCATGTA
AATCATCTTGTATTAGGACAACTGCGCAAGTCATAACCCAAGCTAGAATACACCTCATTT
TCTTAAATGAGGCTACCATTCAAGCAACAAGGAACTTAATTGAACAACTGGACTTAGAGG
ACCGGTGAGCAATAACCTTAAAACCAGCATCTTTTGCTAATGAAAAACAATCAGCAACAG
CAGCTACAGTATGGCCTCTGTTTGTGTCACGTGCAACGTCCTCATATGTACTCTGAACAC
CAATTTCTAAGCGGGTACATCCATAAGATAGCATCTGCCGCAAATGAGGCCCCAGGCAAT
AATCAGGTCTCCTGGAATAAAAAAGACTAATTAGATGCTGTTTCATGGGGAAAATAACAG
AAGATTTTCAAATGCAACCAAGAAGGATGGACACATGTTGAATGACCCTTACGTCTCAAT
TGTCATACCGATACATTTGACAGCGCTATGTTCTGAATAACAAACTGCCTCCTCAACATT
AGCAGAAGTATGCCCCGATAAAGCATCATGGAGATTTCTGATGAAATAATCACGATAATC
AGCCGGCAATGACATGAAAGTCCCACCCATCAAAATGAACTCGACCTGCACAAGAGTATA
TTTGAATTACTTTGCACTTAGAATGCATCAAGTATAAGTAGATTGAACATGAAATCACTC
AAATCAATATGGAATAGTTTTTTGGGCTAGGGGCAAACCTTATCCGCGCTATGTCCGAGC
CTTTTGAGCTGATCTATCCTGCTCCGGGCCTGCACATATGGATTGTACCTACAGTTGCAA
ATTCAGACCAGTAACAATTTTTCAAAAGCATATGTACAAAGCAGTCAAAATGATAATAGT
ACTTGTATGGCTACATAGCTGAACACAACCTGTGGCTCTTAATTTTTCATGTGCAGAGAT
TAAGTAGATGGTGGGGTTGTGTTCTCCACTAGGGAGGTGGTGGGTTCGATCCCCCTCTCC
CTCTTTAAAAAAACTCCGCCTATGTTGTCTCAGCATAGCCGGTCCCAAGCCCGGGTAAAG
GAGGAGGGTTGTGGTAGGCGTGGCGAGCCAACGTGAAAAACCCAGCCACTC