| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1559938
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_10856 |
3 |
1891 bp |
MLOC_10856.1 |
Available |
Available |
LOC_Os05g06750.1, FRAME:-3, EVALUE:0.0, 13105.m00730 protein dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed |
CDS Structure of MLOC_10856
Contig Sequence (5160 bp)
>contig_1559938 5160 assembly3_WGSMorex_rbca.fasta
GAAACTTGATCCCCCTCCCCCCCCCCTAGTAATCCCTTGTGGATCTTGTTATTCTTGGGT
GTTNNNNNNCCCTAGACGGTTGAGATCACCTTGGAGCCACAATCCATTGTGGTGAAGCTT
TGTGATGGTGTTGGAAGCCTTCAATTTAGTTGTGAAGATTACCCCAACCTTGTTTGTGAA
GGTTCAGTTGTCGCCTTCAAGGACAACACTAGTGGAGTCACGACATCTTGCAATATGTGA
GGGCGTGAGCATAATACAGTGGCTCTAGCGCCTTTTTAAAAAACATTGTGCCTTCACATC
GCTCCAACAAAGACATACTTCCCCTCAAAGGGAAGGAATTTCGATAACACATCCTCGTCT
TCATCGGCTCCACTTGTGGTTACTTCTTACTTTTACTTTGTGCAACCTATATTAGTGGTT
TATCTTTTGCTTATTTGTATTATTGTTGTTGTTATCATTATATAGATTACTCACCTAGTT
GTATATCTATTCAACTATATCGATCCTTTCAGAAGAGCTGTGAATTGCTGGAGGGAAAGA
GGCATAAAAGAGGAGAAGAGTTTTTTGTGATGTTGTCCGAATACTGATGTGACCTTGTTT
TTGTCTTAATTATTGCAGGTCCAACGCTTGTGCTCCCCCAAAGTTAAAGCAAAAGAGAGG
GTAAAATGGAGTAGATAAATACTGTCATGTTTGGAAAGTGAGACAGTGAATGGCGCACGT
TAGTTGCTTAAAGGTTATACTCCTATTGAATAGTGAAATTTCATGTCAAAGAAATAGTGA
AAGTGACAGCGTATTTAGAATTCAGAGAAGACGCCAGGAAACATCCCAAATCAAATTCGT
TACTGAATTCAGAGTGCTTGTATCCTTCCAAACAAAACAAAATTCGTAAAGTTAGATGAG
TAGAAAAACGGGCCAGTCTACTCGGTGTACCTTTGTCGCATAAACGATTCGTTTTCAGGA
ACTAATCCTTACATGGTTCCTGAAAGGGCTGCGGTGCTCCATGTGACGATGTCATGGGAG
TAGTTTGCAGTAACGAAATACATATCAACATTCGCATCCCTGTATTCCAACAGTTATAAG
CATCGTGATTTCAACAGTTTATCACAAGAGTACAATGCATAGCTCCACATAGATGCGAAG
ACAGTAAAGTTTGGGCAACGGATAAAGGAAGGTGCAGCAATATGCACTGAAATGGCAACA
GAATATTTCCTCTCCCAGGTATCAACTGAAACAGAAGCTCTAATAACATCGACACCAGTT
TCACATAGTATTATTTAGGATTATGGAAACACGCGGCCACGGCAAGGAAAGAGAATTTAA
CATCATGTGGCTATAATCTCCAGCGAAGGTCGCAATTCACAGTTTCACATAGGAAACTAG
CCCGCAACAAAAGAAAAATAGATGTTTCTAGAACGCATCGATTCAAAATTATTTCAAAAA
CTCGCCAATTGTTTCGAGCTGGCAGCTGAACTCACATCAGAAATCACATGTGGATCGCCT
TGTCGTAGGTGTTCATGCACGCCTCCTTCAGGGCCTCGCTCACTGTCGGATGTGCGTGGC
ACGTGCGGGCAATGTCCTCGCTGGATGCTCCATACTGAAGGGCAAGCACAGCCTCGTGGA
TGATCTCGCCCGCACCAGGGGACATTATGTGTACACCGAGGATTCTGTCAGTTTCCTTCT
CAGATATCACCTTCACCATCCCTTCGGCATCATCGATTGCCTTCGCCCGACTGTTTGCCA
GCAGGGGGAACTTGCCAACCTGGTAGGCTACACCAGATGCCTTGACCTGTTCCTCTGTCT
TGCCAACGGAGGCCACCTCTGGGTGTGTGTACACCACCCCAGGTACAGTGTCATAGTCAA
CATGGCCCTCCTTCCCTGCAATAAATTCAACACATGCAACACCATCCTCCTCAGCCTTAT
GTGCAAGCATCGGTCCAGGGATCGCATCTCCAATCGCGTATACGCCCTTGACATTTGTCA
TAAAGCGCTTGTCAACAAAGACCCTTCCGCCCTTGTCTGTCTCAACGCCAATGGCATGCA
ACCCAATACCAGCAGTGTATGGGACTCTGCCAGCAGATACAAGGACAACATCAGCCTCAA
TGACACTCTGCTCTCCACCAGCTGCAGGCTCCACAGTTAGCTTGACACCACTTCCAGAAG
TATCAACCCCAACTACCTTTGTCTTGAGCATGAACTTAAACTTTTGCTTCTCCAGCATAC
GCTGAAACTGCTTCCTTATCTCTCCATCCATTGATGGGACAATATCAGGGGCAAATTCAA
CCACAGTGACTTCAGACCCTAGCCTGTTCCAGACAGAACCCATTTCTAGACCTATGTATC
CAGCTCCAATGACCACCAACTTCTTTGGTATTTCTGTAAGTGCAAGAGCCCCGGTAGATG
ACACAATCTTCTTCTCATCAATTGTAACTCCAGGGAGCGATTTCACATCTGAGCCAGTGG
CAACAATTATGTTCTTCCCTTTGACGATAGTGCTACCACCATCAACTAAATCCACAGATA
CCTCTGACGGAGAGACAAGCTTCCCAAACCCTTTAACATACTCAACCTTGTTCTTCTTGA
ACAGGCCTTCGATGCCCTTTGTAAGCCCAGAAACAGCCTTGTCTTTCTGAGCCATCATTG
CAGGTAGATCTACCTCCAGATTGGAGAACTTGACGCCATGGTGTGCAAACGAAGACTTCG
CCTCATGGTACATATGCGACGAATGCAGAAGAGCCTGGAATGGTCAAGAAGGAACACAAA
TTATATTGCAGTTTTATAGATTTTCAACAGCTAGCTTCAAAAGCTACAAACAAGCAAAAA
AATACAGAAATACAACAGATTTTACAGCAGTTTTTGATGAACCACCTCCCAGTATATTTA
TCTGGCTTCGCCAAGGTTTACAGACAAGTTTCACATACAAAGGTGACAATACATACTAAC
TATAATCTGAAAACCACACCCAAGAAGTTGACCAAGCTAGAATTAGCAAAAAGGCTTGAA
ACGCTGAGCTGAGCGACTAAAAAAATAACTACAGAACAGTAAACATGGTGTTTCAATGCA
CATAAGCTTGCAGACGATCCGCAATTGAATTTAAGCACTGTCAAGAGTCAAGACGAGATC
TGAAGGCTCTATTTGAGCAAAGATCGTCTGACTAACATCGTTGAGAAGCTAGAGCAAGAA
AGTAATAACTACAGATTCACTTTAATAAAATGGAGTCAGAGCGGTACCACTTCTATTAAA
AAAAGGTAATAACTGCAGAAGACAGAAACTAAGCCAGAAAGCTTGAGCTCTGAAAAAATA
CCAGATTGCATGCATTTGACAACTAACCTCTCTTCAAGGAAATTATGAATTCAATTAACA
TTTTTTACCCCATGAATAGAGTAAATTATAAACAAGTGGTATTGCAATATTGCATTGGAT
GAATATGACAGCATTAGAAATCAACTTTCGAGGTTCATGGTCCACTCCTAGGTTCAATTT
CCTTGAACTTCAGAAATCACTGTAACTATTTTCTTTCCTAGCTTTAAATTTATTTGAACA
CCAGAAAAACGTTGCAGACCTAGTTTCAACCAGTAATGTGGAGTTGCGGACCCCGGAGGC
TTGGTCCCTAAGCCAACAGCAATCAGCAAGACCACAGTGCTAACCATCAACCATACAATG
TTCGACAAATGGTATGGTGCATTAACTAATGAAGAAGCCGAGAACACTATACTTATGCAG
AACATGCGCATAAGAAGCAAAATAACCAAACTCATCATGTAAAGAAATATTTATACAAAA
ACAACCAATGGTCTGGTTGAGTTCTATCAGATATTCACACACCATGCTATTGTCATTAGA
GTAAACCAGCAAATGCCTAGAGTTGTAGGCTTGTAGCACGTTGGCATATGAGAAATCAAC
AAACAACAAAAACCCACACCCGTTGGTCTATAAGCTCACAAAATTGGTACGCCAACAAGA
GCTGTCCCCTATATTTAACACATTTACCCCAAGTGTGTATAGTTCTGAAGCCCTTGACCA
AGCTAAACAAACTGATATCTAAACAAGCTACAACACAAGCTCCATAAACCGCACAAGCGA
CAGCAGGTACAGAACTAAACCCATGAATCACACTCCAATTCTGCAACTCACCCGCAGATA
AGTAATGGCAATGGCATCACATCTCATCAGCCCCAAAGCAAACCCTAGCTACCTACATTT
CTCACCATGGAAATTGGGAAACTCCACAACGTAATCAGTAATCACACAAAAAAACTAGAA
CAAAGTCAACAACCCGACGCCCAAATTGATGATTAAGGGTAAGCTTCCGTACCCTATGGG
CCCGCGCCCCGCAAACCCTAGCGCCGAAATCGTGGTACGATGCGTACGGATCTACGACCT
CCGGGCTATCTCCAGCAGCACGAACGCACCCATCGGGATCGCATATCGAGAAGGGAAGGG
GTAGAGGGGAGGAGGAGGCGGCGGCGATAGATGCATACCTTGGACGGGATGCAGCCGACG
TTGAGGCAGGTCCCCCCGAGCGCGCCCCTCTTCTCGATGCAGGTGGTCTTAAGGCCGAGC
TGCGCCGCCTTGATGGCCGCCACGTACCCGCCGGGCCCGCCGCCGATCACGACGACGTCG
CTCTCCTCCCCCGACGTCGCGTACCCACGGCACGCGGACGCCCACGCCGCCGCGTGGGGC
CGCCGCAGCAGCACCGCCTCCACCGCGCGCCTCCTCGCCAAGCTCGCCATCGCCATCTCG
CGGACTCCTCCTCGCTTCGATTTACTTTTAAGAAGAAAATGGTATGGAAATTCCAAATTC
TCCTCTCTTTCCCTTCCGCGCAAGAAAGAAGATGGGGGCGAAGAGAATGGCTGAGTTGTG
AATTCCAAACACGAAGGGTCAAATAATACGGGGTACCACCAACCAATACGCCCACGAGAA
GTGGGGTACCCCGTTCTAGTGCTGACAGGTGGGCCATTCGTTATAGGATGCCGGGCTTGC
TTGCTTGCTCCCTTTGTCTATTTTCATATAGTAGTCTATATACCTACCTAATAATAAAGC
GGCTATNGCTTCCGTCGAAAAACCCACCGCGACATTTTTATAAAAGAGCCCCTGTAATTT
TTGTATTCAACCCGTGCTCCATCATTTATCTGCAACGTAAAAGGAAAAAACGATTCGCTG
