Contig Data
morexGenes
Links



Map Locations of contig_1559936 (4645 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1559936

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10855 2 1362 bp MLOC_10855.1 Available Available LOC_Os02g44630.2, FRAME:-2, EVALUE:0.0, 13102.m04992 protein aquaporin protein, putative, expressed





CDS Structure of MLOC_10855






Contig Sequence (4645 bp)

>contig_1559936 4645 assembly3_WGSMorex_rbca.fasta
TAGGCACGCCTGTACAGCTGCATACGCATGTTCAAAAGCCAACAGTATTTATGTGCAGTG
GAGAATGAACGTTTGGCTCCTGAGCACCATGGAGGCCTTTGAATTTGAAATTCAAATTTC
ATGAAAATTCATATTTTTACATTTCAAAAAATTCTGAAGAAAATACAGAGATATGTGAGG
GCGTAACACACATGTGTGTAAATTTCCAAGGCAAAATACGTTGAAATGAAAGATGTGCAA
AAAAGACAAATCTGAAGGTTTTTAACACACATGATACTATTAATCCTCTAAGGTCATGAA
TTTCTCTTTTTTGTACAGATCGTATTTTGACGTTTTTTCTTCTGAAATTTTACACACATA
TACGTAACATCCTTATTTACTTGCATAATTGTTTTCAGATTTTTTTTGAAACCAAAATTC
AAAAAAAAGGCTTCCATGGCGCTCGGGAGCCAAAAGCAATTTCTGGGTGACACTAATTAA
TGAGATTCACGGCTTAGATCTATTATATACTCCTATCTCTCATGTGAAAAGAGCTGGTAA
GAGGGAGTATGTTAAAAGTGTTCAATTTGTGCTTACTGTTTTCATTTAGCTGGTAAGAGG
GAGCATGTTAAAAGTGTTCAATTTCTGTTTCCTTGCTTTGGTGTATATAAGCTTGGCTAA
CATTATCCAGGGCAGTTTATATAAGCTTGGCTAACATTATCCAGAGCAATCTCAACAGTA
CTCATGTCAACGTTCCAAATGCAACAACGGGGAGTTGCTAAATGGAAACTACAGCAACCA
TAAATTATAACTTAAATCTTCCACAACAAGAACACACACAACTGTCACACTGAATTACAC
ACACGAGTCTGGATTCAGGTAGGAGAGAACATGTTCAGGAGCCAGGGATGGAGAATCGAC
GGCAGATGCGAAACAGGCTCGTTATTCCGATCGGCTTTGGTAGCGGAGTCGGCCTAGGAC
CTGCTCTTGTTGAACGGAATTGCTCTGATGATCACCTGGTGGTAGACGGCTGCCAGGGCG
GCGCCAACGAAGGGGCCCACCCAGAAGATCCACTGCAAAATGGAACTGGGTTAGGAATGA
AGTTTTCAGGGTATAGCCTCTGTTCCCTCCTCTCAGTGCTGACAGGTTAGGCATAGGCAT
GACTGCTTGAGAAAACAGGCTGACATGCTCACATAAATTGGGTGTGTTCAGCTACATATA
CTCAAGCGGCTCATTTTTCAGAACAAATCAGTATTAAACGCCTATCGATAATGCGCCACT
ATGTTTAGCGTCATTCAAGCTGTTAATTACTCCCTCCGTTCCTAAATATAAGTCTCTCTA
GAGGTTCAACTAATGGACTACANNNNNNNNNNNNTAGACATACTTTAAAGTATAGATTTA
TTCATTTTGCTCCGTATGTAGATATCTAGTGAAATATCTTAAAAGACTTATATTTAGGTA
GGGGGGGAGTATATGATTAGTTTGTGGTTGGTTAGTATACAACACCTAATCAGTTCAGAG
TCCCGAGAGCAAGAGGACATAACAAAACTGTGCATTAACTATGAACTAACATGCCCCAGC
CCCACCATGTTCGCATCATATCTGGAGGTACTTATTGAATCTGATATATTCGTCTGGAAG
AAGTTTGATTATTTAGAGGAGCAATTTGCTGAAAAGGGCAAGTAGGTGAGAGTGGGGTTT
CACTCACATGGTCATTCCAGGCATGGTCCCTGTTGTAGATGATGGCAGCCCCAAGGCTCC
TAGCTGGGTTGATGCCGGTGCCGGTGATGGGAATGGTGGCCAGGTGGACCAGGAACACCG
CGAACCCAATCGGCAGCGGGGCAAGGATCTGTTTTCACAAACAACGGATATAAATATGAC
TATATATGCACAATTTCGCCGAAGCAAGCAAGATGAAGAACCGGACGATATAAATTCTAG
GCATGAACTATACACCGCAGTACCACTTACAAGTTACTAGCACATGAGTTCACTGTGTTT
ACGTAGTGAAGACAAAATTAACTGATGAGAACGGTAACATTACATGGCTCCTCACGCCAA
ACTAATAACCAATGCCTTGCTAGCATGTAGCATCACATAGCAGACATAACTGGTGGAGCC
AAAGTGTAGAGAGTACTTACAGGAACATGCGAGTCCCTGGCATTCCTCTTGGCATCAGTG
GCGGAGAAGACGGTGTAGACCAGGACGAAGGTGCCAATGATCTCGGCACCAAGGCCATCG
CCCTTGGTGTAGCCACTGGCAACTACATTGGCGCCGCCACCGTTGCCCATGTACAGACCC
TGCTGGAAGCCCTTCACCACTCCAGCCCCACAGATGGCCCCTAGGCATTGCATGATTATG
TAGAAGATGGCCCTGGTCAGGGACAGCTTCCTGGCCAAGAACAGCCCAAAAGTCACTGCT
GGGTTGATGTGTCCTCCTGTCATTTTAGCACGTAATAGAGATTAGCGGTGTCCTCAACTT
TGATGGCGCTTTTGTTGTTACATTATGGTTGTTCTCTCACAATTTGACACTGGGATTAAC
CAGGCAGAATCTGATATTCAGGAGCAGTACTGAGAACTGGACCACAGAATTTACTGGCGC
AGTTATTTACTGAGAGACATTGTACAATTTGACAATAAAAGAGGTTTAGTGACTATTAAT
TGCTGTATTGCCCGTACCGAAGTTTAAGCAAACTGAATTTTTTGAAATGTTACTGCATAC
TATTTCTTACCTACAGTACAAGTGAAACAGAATCAGGATCAACTAATTAAATGATGTTTC
CGTGTGCGCCTTTTGAGGTTCGAATATCTAGAGTTGGACGTTACAGAAGCGCTGCATCTA
AAAACAGTGGATCGTGCCTTTGCAAAAGAAAAGAGAACTAGGTTTACATACTGCAGCAGT
ACAGTGTGCCGATGAAATGTCTGATACTGCTGGCTACTAGTACTAAATCACAACAAGACA
AAGACCCAGATTTTGTGCACATGGTCCTAAATTCTCTCTCTTCTGTTCCTATTTTTTGAT
TTTATGTGTTTTTTAAAAGAAAAGATCATACATATGCTCAACTGGGTGGTATATGTCAAC
ATACAAAAAATGGTGGGAAAATGTGACATTGTTCGTTCTGTGGCAAGAAAAGAGCAGATT
GGTACAGTCTCAGTGGTGAGCAGTACTAGCAGTCATGATGGAACTCTATATTTTTTTTCT
AAAAATGTTTATACACACAACTGTTTAAAGTGAACAAAAGAAGAGAGATAATTATAGTAC
GTTCGACACGCAACCCATTTCGCTTTGGAAGCCGAAGCCTTTAGATGCGTTGCGTGCAAT
AACAACAAAAAGGTACAGTGCTAACGGGCAGCTGCTTCAGCTGTGAAGCAACAGTCAGCT
ACAGTAGTATCAAGCCAAGAAGAGAGAGAGAGAGAGAGAGAGAGACCTGAGATTCCGGCG
GTGCAGTAGACGAGCGCGAAGATCATGCCGCCGAAGGACCAGGCGATGCCCTGGACGCCG
ACGGTGGCGCACTTGGAGGGGGCCTTGGAGACGCCCATGACGGTGAGCACGGTGACGTAG
AGGAAGAGGAAGGTGGCGATGAACTCGGCGATGCCGGCGCGGTAGAAGGACCAGGACTTG
AGCTCCCCGGGCTCGAAGAGCGGCGCCGGCGGCGGCTCCTTGTAGTCCTTGTCGTCCCCG
CCGCCCTGCGCCGCCGTCCCGATGGGCTGCCGCTCCGAGTACCTGTTGGCGCCCAGCCGC
ACGTCCTCCTCCTTCCCCTCCATTATCCTCTCTCTCTCTGGCTGGCTGCTCCGGTGGGTG
CGTTGTGAGCTATGGGGTGGTGGAGTACAGGCGAGTTATAAAGGCATGAGCGGGGGTGAG
TGAGTGAGTGAGTGAGGAAGGTGGCTCTGGAAAGCGGCGAGGAGGGTGATGAATGAGGGA
GGAGCACGGGAGTGTCGAGTGGGGCAGTCCAATGGAGTGCAGGTGCAGTGGTAGTTGGTT
GCGTCGGGCGCCTTTTCCGCTTTATGGTTTGTCTCCGAACTTATCCAATTCGAGGGTTCG
CATCATTGTTTCATCAATAAGCAGAGAATAATATATTATTTACAAATACAACAGAGTATA
GAATAATATATACTTCCTTCGTTTTAAAATACTCCTAAATAACTCAACTTTATACCAAAG
TTAATACAAAGCTGAGTTACTTATTTTGAGACGGGGGAGTATTATTTGACGAAAGGAGAA
AGAAACGCTCCTCCATGCGAATCTGAATCCTGATGGAGAGTCTGTGTGTAGGCTGTCCGA
GTGTGATGTCCATTTCTCTTCTCTTGCTTCTTGGTAAATTCAGTGGATTCTCCCTTGCAT
GTTACACTCTTTTTGCTGCACTCGATCTTTCTTGACACGGCCGCGTAGCTTTTTCCTCGC
TTCCAAGGATTCTTTGCTTTGGCTTTTGCCCTGCCCGGGGCCCACCAAAGCTTAAGCTGC
CATCAATCAGTCCTCCGGGAGAGAGATAGAGGACAAGGAGCACCAGCACAAACACAACAA
AGACGGCGATGGGACTACGGGAGCACGCCATGTATTCAGGCAAAATTGACAAAATTAACC
TCTAAAGTGAAAGAATTTACAAAGTGAACCCGAACGAAAAAAAATTCACTCGGCGGACCC
TTTCGTGTGGCGCCCGACACCTAGG