Contig Data
morexGenes
Links



Map Locations of contig_1559874 (4138 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1559874

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10830 2 2340 bp MLOC_10830.2 Available Available LOC_Os01g56460.1, FRAME:+1, EVALUE:2e-25, 13101.m05974 protein mitochondrial glycoprotein, putative, expressed





CDS Structure of MLOC_10830






Contig Sequence (4138 bp)

>contig_1559874 4138 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCCAAATCATCCTGCACTCATCAATGCAACCTGAGACAACTATT
GGACTGTTAATTCACTGGATTTTAGATCAAACCCGTAATCCCAGATAGATATGCAGCAGG
GAGCTGGAGTCAGTCGATTCTTCGATAGCAGTCGGTTTTCTACACCGACTCCATTCCTCG
CTTGCAATGGAGCAAGGCAACTTTGGCGGCAGCAATGAGCGGGAGCAGCTGGGCGCAAAA
GAGAAGGGGAGGCACGAGAACGGAGAGGGGATAGAGAAGTTCAAACACTAAATACCTACC
TACTTGTTTCGGTCGAACCTAGTTGGATTTGACCCATTCGAGGCCAGCGTGTGCTGAGGC
AACGTCCACTCCGGAAGCATATTTCATGTTATTTTTGTTTAGTTCAGGGGCATTGCCATT
ATGACGGTCAGTTAGGGCGCTGAGAAGCTCAGGAAGCATTTGAGGCATCCTGTCACCAAT
GGGAAAAGGAGTGACCAGTGAGATTAAGCTGTTCTTAAGCTTTGGATTAGGGACAGCTTA
TGGCTTATTTGGACCTATAAGCTGTTCCAAATCCAGCCTTTTTGTCACTCGGATCTGGCC
AGTGGGCCAGGTAGGTCGGAATCGCTGTTGACTGAGATGTAACCATCTGTCACTTATGGT
TAAGTGTAACAAATTCCAAATTTTGTCGCTTTTTGGAACCTATGTCCCAATAGTTTGTGG
TTTCTTGATACTGAGTGGTGCTTCGGTACCCCCCACCCCCTAAAAACTTATGAAAGGGTA
CTTTCTAATCAAAACCAATTAAAATGTGGCGAGTAATTAGGTATATCTCTGGCCTGCCTA
GACCGGGGTGTGACTCCGTCGATGAAGTCGAGAGAAGAGAACAGGGGCAAGCAGGAAGTG
ATGGAAAGCTGGGAGGAGGGAGAGATGAGTAAGCTAATTCTGTCATACAATAGTCAGGCT
GAGCAGATGCCGACCTGCCTCTTTCCTCCTACAAGCCTGTGCTGGCGGCGGCACCATGAG
AGGCCCTCTGTTATACATCAACGTGGACGAGAACGAAAGGGAACTTGTGATGCAATATTT
TATTGACGGTAGTTCCAATTAGTACTCCGGCTACTTTCTAAAGAATCAGATGTGATCATA
ATAGCGCTGAAATTGCTGATCATTTCAGAAAACAGAAGCAGCGGGGGAACGTCCATGGCA
GCGGCACAACATCCTCACCTCTACCACTTAAAGTTCTTTATAGCAGCGACTAGTTAATTC
GTGAAAAGGAAAATCAGATCGACAAAGGGTGCTTGATCGCTGTTCTTGTAATTGGGGAAT
AACAGTCTTGTTTATTTGTCTAATGAGAGAGGGATAGATTAGACGGAATATGAGAGATAG
AAATTAACCGTAAAGAAATTCTGCTAGATTGCAACTTTTTTTGGGTTGGACCATCTAATT
AATCTGGGTAATGACCATACTACCCTTTTAGGTAAAGAGGTAAGCCCTGAGCTCCACTGT
AGACCTTACTCTAATTTTAAAGATCATTTACAGTGTTCTCCAGTGATTCAGTCACATCTG
GAAAAACCTTTTTGCGATAAAGGATGATTTGTCCTGTGTGCTGCTACCATTTTGCAACTT
TGATAGCTGGATTCTGGTTGCTTGTTTTCCTTGGTATGCAGAAGCGGTGTGATGTTCAAT
TGTCACTAATAGAGTAATTTGGTTTGTACTGGTGTTAGGCCTTATTTATGCATGATAATG
CTAACAACTGAACATATGCCATGTGTTAACTTCCTAGGTTTTATTTATAGTATACTGAAA
TTTGATTTTGAGTTGACAGAGAGTTGGATGAGAAGGTGCGCGATGCGTTCCATTTTTACA
TTGAGGCCCGCGGCATAAATGAAAAGCTCTTCCCGTTTCTACAAGCCTGGCTCTATGTGA
AGGATCACCGCAACCTGATGCGCTGGTTTAAGAGTGTGGGTGCAGCCGTCAGCGAGCCAA
AGCCCGAGTAAGGTGTGTTACTGTTTTCCTCTGTGCATTGCACCTTGTAATATCTCGTCC
GCCACATCTTTCTTACATCTTAAGTTCATGGGAATGAGTATTGCTATCAGTATAAAACAG
TGTCCGGTGTTGAAACTCAGCATGCGTCCTGTTACATAATCGGGTGGTAATATTATGTCT
GTTCATGAGAAAAGTAGTCGGAGCATTGTCTCGCTACTACAACGAGGAATCAATTTGAAA
TACAATCACAAGTATGAGCTGTTGTAACCTCATAGTTTTAATGTGAGATCTAAACTGCTG
TTTTATGCTTTTCAGATGACAAGAACGCCGCCTCTGCTCAAGATCACCCGTAAGGTGCTA
CTGCAGAAGTGTTTGCCTGTTGGGAGAACCCAGAGGATTGAGAGTAGTGCTAGTAGTATA
AAGTTGGCTTGGGTACAAGATAGTGCCATCAACTAATATATATTGCCTTGTCTTCAGTTT
TGACTGTACCCCTTGGAGTTTTGGAGGATGCATGATAGTGCCGCTGGAGGGCGAAATTGG
ATGGGTGTTCATCGCATGTCGTTAGCCTCTGTGATCCGCTGCCGTATCACATCCTGAGGT
GGTTGTTAGGTTCTCAATTATTCCACGACCATGGGCCAGTTCACTTGTGCATTGCAATCA
TTCATCATTTTTGTGAAAAGACGCCTACATTTCTGATAAACATTTTTCTCTTGCTTTCTC
CGGCATTGTGTGGGTAGGCTCAACGACCGGATGATGCCGTGCCTTCCAAAAAAAGAAAAA
CTATCATCACCGTGCAATTATGCACCTGTTTTGCCGCCTGAATGGAGCTTTAGTTCAGTC
CTTTGGATATTTATATGGCTCATATAAAATATCTCAAGACAGCATTATTGTAGACCAGAC
GCTATCAACATTTGACTACGGTTTCAACCGGAGAACCGACGTTTGGGATCTTCATGGACC
TTGAAATTAAAAAAAAAATCAAATTTTAATTTTTTTGGTTCTAAAAAAATCTGAAAAATA
TGCAAGTAAAGAAGGATGTTATGCGTGTGTAAAATTTTAGGATGAAATACCTTGAAATAC
AATCTGCACAAAAAAGATAATTTCATGACCTGAAACGATGAATAGTATCATGTGTTAAAA
AGCTTTAGATTTTTTTACACAACCCTTATTTAAACGTATTTTTTCTGAAAATTTACATAC
ATGTGTGCTACGCCTTCACTTATCTTTATATTTCTTTTAATTTTTTTCAAAAATATAAAA
ATATGAATTTTCATGAATTTTGATTTAAATATTTAGAATCCTCCATGAAGCCGAGCTCCA
AAAACAATTTCCGGTTTAAACCGGAGCAATCCTAGACTTATGCTCATTTCCATCTGGGAT
ACGATTAATGCCAGGCTCACTCCTTGCAGCCCAGGCCATTTCTCAGCTTTCGGGTTCTGG
ATCGATGCTTAATTTCTGGGCTTCCACGCTCAGGGTTGAGGGTTAACTTTGGGTAATGAC
TCGACCCCAAAGAGCATCTACAACCTGGTTGCCTAAGAGCATCTTGAGCCGCCCCTCAAC
AGCCCCTCCCCTCCTCTCCGGTTTTTTTTTTTCTGTTGACGAAAAAAACCCGGCCCAGTC
GTGTCCCGAGGAGCCCGTTATTCGTCAGCTCGGCTAAAATTGGCACCGGCGGTCCCATGC
CGAACCCAACTCTCTCGGGGTCGCCCAGGAGCGCCGGCGAAAAATTCTTTGGCACGAAAA
ACGATGGGTCTGCCGAGTCAGTTACTAGGCGTGTGGTCGTCGTCCTCGTCGCCTCGTTTT
CCACGGGAATCAATGCGAAGGCTGTTATTGATTCACGGGCGGCGCAGTGAAGACGCGGTG
ACTCACGTCCCATCGGTTTCTGCCACGGCGACGCACGCCCCGTCGTTTCCTGCCACGCGT
TGACACGACGCCGCAACGCATGCCCGCCCGCCCGCGGCTATATAAGACGACCTTCCCCCT
GGTGGCCACACACCTCTCTCGCCGACCCTCTCTCCTCTCCTTTTTCGTCACTGACGCATT
CTTCCCTCTTCTTCCTAAAAAAGATGGTTTAACGCTACCCCGACGACGAAACGGCCGCCA
ATGGCTTCTGCCGTCGGCACCTCCGCGAGGACGAGACCTGCCTCCTCTACGAGGCGGA