Contig Data
morexGenes
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Map Locations of contig_1559845 (5362 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1559845

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10821 1 442 bp None Available Available None
MLOC_10820 1 540 bp MLOC_10820.1 Available Available None





CDS Structure of MLOC_10821






CDS Structure of MLOC_10820






Contig Sequence (5362 bp)

>contig_1559845 5362 assembly3_WGSMorex_rbca.fasta
ACCACCACAGAGCAACTCTGAGGGTGGCTGTAGTCATCAGCCTTTTGTCGTTCCTGCTCA
TTCCGTGTAACGCCCTCAGGCTGACAGGATCGCTCTGCCAAGAGCGTGCTGATAATGTGT
TAGAGTAAAACGAGATTGAATGAAAGTGAATGGACGATCAGTCCTGTTTCTATTGATTTT
CAAGTATATATATATCTGAAAAAGGTGCAAAGAAGAGGTGTCTGTTCGGAGGCATCCCTC
CAGAACAGGTGCCTGTTGGCAATAGAAAGACAGAGGAGACACGACTGTTCGGGTTGGATA
CATCCCTTGGATTAATGTACTAATTAATTTCTAAAAGTTTTGTTGTGGGAGTTTAGTCCA
CCCTCGTCTAAGGATGAGCGTCATAAATGATATAAATGGTAGAATGGTCTATCGGCATGA
CACGTACCAGGCCCACAGTGTCATGATGTGAGTTTTGCCGTTCGGGAGCTCATCCTGGCT
GCTAGCTACTACTACCCACATCATGGCACTTTGGGTCCGGTAATTTTTTTGAATAGGCCT
CACCTAAGGCCATCGCAGGGCACGTGTCAGTCCCCCGCGTTTTTCTGATCCGCGTGTAAT
ATTTGAAATATTTATTGCACTGCTAGGGTTTTAACGCTAGAAATTGCAGATTTGCAAGCA
GTGCGTAGGCCTTCTGCAGATGAGGGAGGGGGAGGCCTTGCCGTCGGAGGAAAAATTACC
TCGGTGGCATGCCTAATGCAAGCATTTAAATCCTCGAAAAATCATACGATGCAGGAAATC
CTCGGGATCTGGCACGGTGTCATCACATGGCCCCTGTAGGGTGTGGTAAAATTTTGGGCA
CGTTTCGAATAGGCCTCACCCGAGGCTGCTTGTAAACCGAACCATCTTCGAGCTAGTGTT
TGGGTATCGAATAAGGAATGTGTCCGGTTTGTGAAGGAAGTGCGGGTCTTGTTGCTTCGT
TGCCCCCGAAACTTCTACGCCTCTCACAGGATACCATCGCATGACACGTACTAGTAGGCC
CCCGTATGTTTCGGACCCGCGTGCAATATTTGAGACATTAATTGCATTGTTATAGTTTCA
ACGCCGAAAATTGCACATCTGCAAGGCGGCACATGGAATCATGCCCAAAAGCTGAATGGA
AAATCTTATTTGATGAATTTGCGACATGCATAGGCCTTGTGCAGATGACGGAGGGGCAGG
CCCTACCACCGGGGGGTGAAATTACCTCGGTGGCATGCCTGATGCAACCGATTAAATTCT
CAAAAAATTGTACAATGCCGGAAATCCTCGAGATCTGGCACGGCGTCATCACATGGCCCC
TGTAGGGTGTGATAAAATTTTGGGCGCGTTACGAATAGGCCTCACCTGAGGCTACATGTA
AACCGCACCATCACCGAGCTAGTCTCTCGGTATCAAGAGGGAATGTGTCCGGTTTGTGAA
GGAAGTGCGGGTCTTGTTCCTCTGTTGCCCTCGAAACTTCTAGGCCTCTCAAAGAAGGCC
ATTGATGACACATGCTAGTCCCCCGCATTTTCCGGACCCGCGTGCAATATTTGAGACATT
TATTGCACTACTAGGGTTTCAGCGCCGGAAATTGCAAATCTGCAAGGAGGCACATGGAAT
TATGCCCAGAAGCTGAATGGAAAATCTTATTTGATGTCTTTGTGACATGCGTAGGCCTTA
TGCAGATGAGGGAGGGGCAGGCCCTGCCATCGGGGGGTGAAATTACCTCGGTGCCATGCC
AGATGCAACAATTTAAATCCTGAGAAAATTGTACGATGCTGGAAATCCTCGGGATCTGGC
ACGACGCCATCACATTGAAGCGTAACACAACAGAAAACAAAAAAAATCCGACCTACGCTC
CAACCCAGGACCACTATGGAGACTGCATACAAGGTTTGATCATTTTCTTTACCGACTCGT
AGCGCGGCGGAAGTAGAGTCGATGATGATCGGCGGTGCAGATCCCCGCAGCTCGGATTTA
CAACCTCCCAACCACGAGGATGCATACCCTCATTAGCCCCTCGGACAGCCCTCCGGGAGG
CGGTCAGACAGTCCCCTGTACGGTTTCGCGGACAGCCCTTCGGGAGGTTCTTTTGAATCT
CGAACGGTCACTCGGACAACCCTTCGGGAGGACCTTCGAAACTCCGGCAGTCACTCGGAC
AGCCCTTCGGGAGGCACTCTTGAACTAAGGCCGAAACAACGATCTCTCTACACAGTTGCA
CACATACGGTGTCATCTATCTGGCAGGGCTTCGTCGTCCATAACTAGTTCTTGCCGGAAC
CCAAACAGCCTTTCGGCTCCACGAAACTATTTCGCTCGGAGGGAGAGAGAAGCCAGATAA
CATCAGATGGCATGTGTATGTGAGAAAGATTGAGTGTGGAGAGTGCCTCTCCACCTCTAT
TTATAGGAAAACCCAAGGGGTAGGGTGGCTCTCAAAAGACCAAAATGCCCATGAGGTGAG
CACACCACAAGGGCATAAAGGGAAAGCCTCCAAATAGTGTTGTCTGCATCACCATGCCTG
CATCATTATGCCTGCATCACCATGCCTGCATCATCCCCTAATAGTATTTCCACTATTTAC
AATAGTGTTTCCACTATATATATAGTGTTTCTACTATTCAAAATAGTGTTTTCGCTATTC
ATGAAGACATTTTTCTGCATCCGTTAAATCCCAAAGTATTTCTGTATGCCTAGGACAACT
CGAGTACCCACTGAAACAATTTTCGACGCGTTCTGAAACAATTCCGGAATAATGTTTTTC
TTCAGCGAAAAACTACCATAGCGGTTCCGGCTGCTCTGGAACACTTCCGGTTTTTTCTTC
GAAAAAATTTGAGAAGTTCCCAGAATCATTCTGGCACCCTCCAAGAATTTCCACACGTGT
GCCAAAACCATTTTTACTTAATGGTATATTGTGAAACAACTATTCATTTTTACCGAAACT
ATTCCAGTGTTCTGTGTGCGGAACTCTTACGTTGTCTTCGAAACATTTTCAGTGATTTTC
TCTCAGATTCCGTGTCTAGTATTCAGCAAATAGATGACCCTTAAGCGTGTGACCCTATAG
GTTTGATGAAGTACATACATGACCCGGAACCCCTTCCGATCAATGATCAACATCGGAGCC
GTCGACACCCATATTGACCTTATACCCACACGAATGAATATTCGAGTGAACCTCCGATTG
CCGTGTGCTATTCCTGTTGCTTCGCGATATGTTACAAATACCCGAGGTGAGACATGTTGG
CATCCCCGTGGATCAACAACTTGTCCACTATGCCAGTTACATCGTTACCGGTATTGTTCT
CTTTTCTCGTTACCGTGTTCCGGCATCCCCGTGATCGAATTACAAAGTGTCTGGCCAGAC
AATGATGGATACCGTAACACCAAGGGGTCCCAGACATATCTCTCCATCTTTGGAGGAGCA
AATCCCAATCTTGAGCTATCAAGTTACTTGACATACTTTCCCATGAACCCGCAAGCCGTC
GTAATAGCCATCCAGTTACGGATGATGTTTAACAAACCCCAAAGTTCATGAATCAAGCAT
GAAGAAACTCGATACTCTCATGGTCTGAGAAATCATGGAAACTTAACCATCTCTGTGTTA
TTGCCCATTTAACTTGTGATGAATGTATCTCATAGCATAACATCAATTCGGGTCGATTCA
ACACAAATGTTCTTCTAACATTGTGCCCTCAAAGTTGCTGGCATAGACATGCCCATGATC
AGGAAAACAGAACCATCATGCAACACTTGAGCTAGTCTTAGAGGCCAGACTAGGAATACA
TTTTACCGTTTATTATTCCACACGTGCATATGAGTCTTCCTCCAAGCCTCGTGGTTATTG
TAGACTCGAGAACTATAGCAGTTATAGCATGAAACATAAACCTAATTATGAACAGGGAGA
TAATCAATAACATTTAGTATTGCCTCTAGCGCATTTCTCCTACACACACGACCCCGGTAG
GGTGTCGTAAAATTTTGGTTGTGTTTCAAATAGGCCTCACCTTAGTCTGCTTGTAAACCG
CACTATCTCCAAGCTAGTCTCTGGGTATCGAGAGGGAACGTGTCTGGTTTGTGAAGGAGG
TGCGGGTCTTGTTGCTCCGTTGCCCTCGAAACTGCTAGGCCTCTCAAAGGAGGCCATCAC
ATGACATGTGCTACGCTCCCGCATTTTCCGGACCCACGTGCAATATTTGAGATATTTATT
GCATTGCTAGGGTTTCAACGCCGAAAGTTGCAGATCTGCAAGGAGGCACATGGAATCATG
CCGAGAAGATGAATGGAAAATCCTATGTGATGCAAGATTAGATGAAAGAGGCACAAATGA
TGCTGACTACTCATTTTGGTGACTATTCATTTTCCTGACTACTCATTTTGCCGGGAGTAG
CAATCGGTATGCATGCCTTTTCCGAGAGCTTCTCTCGGTAAAAGAAAAAAAAATCCTATA
TCTAGATTTGAAATCCTTTTCCGAGAGTCAATCTCGGCAGACTTGTGTTTTCCGAGTGCG
GCACTCGGTAAAGGTGAAAACGTAGATCTTGGTTTTCACCTTTACCGAGTGTCGCACCGG
CGCTCGGCAAAGGCAGCACGGGACACTTAAGTGAATTCCCTACGCTCTCTCTCTCTTCAT
TTTGGTGCGCGTCCACACTTTCCTCCTCTCCTCTCTGCCAACGCCCTCCCCCTTAGCCGC
CCCACCCACCGATCGGCTCCCCTAAGCCCCCCAGCCGGTGCCCCCTCTAGCCGGCAGGAA
ACAGCCTCCCCGCACCGTCCCTGAGCTCCTCCCTTCCGACCTCCTTGGTGATCTTGCCCC
TGCTGCTCCTCTCTTCCTTCCTCGGTGGATAGATGAATAGATGGATGGATGGATGGATGG
ATAGATGGATGGATATATAGATGAATAGATGGATGGATTGATTTTGGAGAATTTGATGAT
GTTGTATGGATGGATAGATGGATGGATGATGTCTAGATGTATGGATGGATAGATTAATGG
ATGCTATATAAATCAATTTTGTCGTTCTTGTGTAGGTATGGTAGTTTTAGTTGTGTGTAG
TAGTTTTAGTTCTATGTAGTAGTTTTTGTATTAGTTTTTATTTAGTAGTTTTTATATTGA
GCGAGTGTCCACCATATTTGACACATGAGGGATGTTTTCAGAGGAATGGTATCAATGTCA
CGCACAATGGACTCGCCCAGCTTGACCATCACCGAAAGTAGAAATACCCGTGAGAGAATG
TCCACCATATATACAACCAGCAGAGAGAGTGTCCACCATATTTGAGAGATGAGAGATGTT
ACTGGTAACTCACAAGTGTAGGGGATCGCAACAGTTTTCGAGGGTAGATTATTCAATCCA
AATTTATTGATTTGACTCAAGG