Map Locations of contig_1559810 (6112 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1559810

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10811 1 2502 bp AK360154 Available Available None





CDS Structure of MLOC_10811






Contig Sequence (6112 bp)

>contig_1559810 6112 assembly3_WGSMorex_rbca.fasta
GTGGGGCCCACCCAGGCGGCCTTCCTCTGACCCATCTTCGGTGATCCAGAAGCTTCTGTT
TCGCTAATTTTTTATATATTTTTCTGGAATTTTTCGGGCTTCGAAAAATTGGTAAAAGCC
CCTGCAAAACCGGTACCGGAACCTCTGCGTTTCACAAGCGCCGGTTCGACTCGGCAAAAC
CGTCAGCACTCAGCAGCAAAGGTGAAAAGCCAAAAGCTTCAGCGCACAAGGTGATGAGTG
CAAGACCAAGACTCCTGCTCTGTTAAGCATTTCCCACGCCTACACTTTTTACATTACACT
GCAAACGATTTTACTTACAAGCTACGATCTTCTTTACAAGCAACAAACGCCAAGAATCGA
GTGGTAGCTGCATTTACCGTGTGAAAGAAATAAAGAACCCAAGGAAGGAATAAGCTGGTG
GAAAATGAAAACCTGACCACAAAACCCCGGCACAGCGAACAACACGACACTCGATGGTCA
ATATAAACCTCTGCTCCGTCTACTTCTGGTCGTCGCTGATGGACCCATCCTTGTGGAGCT
TCAGGCTGAGGTTGCTGAACCTCTGCCTCGAGTACTGCCGGGACGCCTTCCTCCAGTCCG
TCCCCGCCTTCATCATCGCCGCAAACTCGTCGTAGCTTATCTTCCCGTCCTGTAATAACA
TCCAAAGATCACGACACGCACATCAATGTCAGGGTTGAACTTAGGGGGGGTTGAACAAGT
CAAGCTTGCAGCTTTCAACCACAAATTGGATATTACATCATGTCATATTATATTTATCTT
TGTCTGGCTGGCATGTCGTTTACTTTGCAATGTTAAGCACTGTATTATTCTTGACTGTGT
GGTATGCCTTTGATCCTCAGGGGGGTTGAACAAGTCATACGCTGCTAATTTCATTATACC
AAGTCCGGTTAGGTTAAACGTTATCCTTGTCTGGTTGGTATATCGCTTATTTTATAGTGT
CCACCACTATCATTGACTGCCTGGTAAGACTTTGATTTCATAACATTATTATTATAGGTG
CAATGAAAGCAATCGTCAATATTTTAGTTGGCCTGAGGGAATCCTTTAAAAGAACAAGTC
TGGCAGTAGCATTCGACTCCTGACCACCGGCATGGGTCATATGCATGTGGCACAATTACA
GAAACTAGTATTCAAATCAGTTTTAAGTAGTAGGTTGGTTTCAGTTTTCAATAGCAGATC
AGTCATTAGCTTATGTTCTGACTTCTGAGAAAGATGTTGTACAGTTTAGTGGGTTGTTAA
GGTATGAGAGGGCTGACCTTGTCTGTATCTACATCATGAATGATGCCATTGATAATGTCT
TCATCGCAAGGTCCATCCACCTCATCGGTCAGTGCCACTCTAAGCTCTTCAATCTCTATG
TACCCACTCTTGTCTTGGTCAAAGTATGAGAAAGCCTTTTGGATGTGTTCATCATTGCCT
ATTTTTCTGACATGGATAGACACCGCAACAAATTCTCCATAATCTAGAGTGCCGTTTTTA
TCGACGTCAGCCTGCAAAAAGTAATGCAAGTAACTACCTTCAGATCTCTCAAAACCCAGA
TTCTTTTTTTATATAGAGAGTAGAATTTTTCGTTTAGTAACTCACAGCATCCATCAACAT
CTGAAGATCTGAATCATGCATTTTGTTTCCAAGTTTACGAAGGCCAGCCTTGAACTCATC
AAAGGTTAGTTGGCCCTTATTGTTTATGTCCATGTTATCAAACATTTTCTTTATGTCAGC
TACTTCTTCTAAAGACAAATGCTCGGCAATCACCTGCAAGGGTTAAAGCATGTAAGAGAA
ATCCGTTTCAAATGTGAGTTTTATTTGATGAAATCAATTCTGATTAAATGTTTTTGATCA
GTGAGGATACTGATGTAGTTGGAACTTGGAACTACAATGTAATGAGTCTTACCCTCAAGG
CTTTCTTCTTTAATTTGTTCATTGCAGAAAATTGCTGCAGTCTTGCTCGGACAGTATCGC
CAAGTTGAATGTCAGGATTCTTTTTCGAATCGTGTAACCATGGATGTTCTGCACATGCAA
CCAATGATGTCACAAAAGAAATAGGAAAAATTGTTTGATAGATGCAATTGGTAACCATGT
GAGTTAATTAGACATCAGTTGCTCACCACAAAGAAACAAAACAGGCATACCTCCATATAA
GATAAAAGAATATGATTCACCATTGAAATGAGAGCGAGACAGAATTATGTGTGCTGTTAT
GCAACGAAAAAGGGAATGTCATAATGCTCACCAAGTACTTGTGCTGCAGTAAGCCGCGTG
ATTGGGTTTGGATCGAGCATCCGCCTGACAAGATCTTTAGCAGGCTCGGATACTCTGGGC
CATGGGTCTCTTTTGAAATCCACAACAGAGCGTATAATTGCCTGTGCAACTCCCTGTTCA
GTTTCTGCCAAATATCACAGGAATTTGTAAGCTGATTTATAAGCTTCCTGCAACATACAT
TATGTCTAATCAAGGAAGGTAAGTACCTGCCCAAAATGGTGGCACACCACAAAGAAGTAT
GTAAAGTATAACTCCTGCACTCCAGACATCGATTTCAGGGCCATAATTGCGCTTCAGAAC
CTCTGGGGCCATGTAGTATGGACTGCCTACGATTTCACTAAACCGTTCACCTGCATACAG
AAGCCATCATCGATGATGAGTAACCCTTCAGTTTTGCGGCCAAAACATTGTACATGTATT
CTCAATAAACATTGTACATATATTCTCAATAATTTAGTAAGAGTTTCCATATTTGCTTTG
AGAGGCTTGAAATTCCAACATAAATCAGAGAAAAAAATGGGAAGATCTACATCGCTTATT
ATAGTATATTTAGATCATAAGGTGCAGAGTATGTTATTGAGCATCAGTTGTGTGCTGAGC
ATACCAGGCCTGAAGAACACAGAAAGCCCAAAATCAATTGCCTTTAGAGGAGAACTCTCC
TTCTTGTTCGCATATAAGAAGTTTTCCGGTTTGAGGTCCCGATGGATGACACCATTCCTG
TGGCACATCTGTCACCATACAATAGCAAGACTACATGTCAGATACTCAGATGTCACAAAA
CAACCGAATAATGCAAGAAATTGATGCAAACAATGGCAGTGTGCATCCTAGAGCCTGCAT
GAATATATGCTTTTAGGGCTGTATGCATCTCTCGATGCAGAGGCCGGGGCGTTGCCTCCT
TTTCTAAAAAATGAATATATGCTTAGAAATCAGGATACTACCATATTTGCAGTGTGCACT
AATTGCTGGTTCAGTTAAAGTTTAACACAAACAAAACCAATCCCCAACGTCTAAGAGGTT
ATCGATCCCGAACAACTGAACAATTAAATTCAGTTCTGTTTCTTAACAACAACAAAAAAA
TCACTAGTTCAGAAGCTTATCTGAAGCACATGAAAGCTATTAACATGAGTTCCTCTTCTT
TACTAATCTACTGCATAATAAATCGATGAACACAAAGCTCTAGTGCTAGCAACTAACTAG
TAGTATTAACATAGCTTGAGCAATAGCCAACAATCATAGCTAGCAACTATTAGTAAGGAG
TACAGTAGCAACCAAGAAAAGCAAGCATGCTGCTTGTTACCTGGACGACCTCGACGATGG
TGCGGGTGACGGCGGCGGCGGCGCGCTCGGTGTAGTGTCCCCGGGCGACGATCCTGTCGA
AGAGCTCGCCGCCCTCGCAGAGCTCCATGAGGAGGTGCACGGCGTCCTCGTCCTCGTAGG
CGGCGCTGAGGCTGACGATGTTGGGGTGCGGCGGCATGTGGCGCATGATCTCCACCTCGC
GGCGCACGTCCTCGACGTCGACGGGGGTGCGCAGCTTGCGCTTGGAGATGGACTTGCAGG
CCATCCGCGCGCCCGTGGCGGCCTCGGTGCAGAGGTAGGTGACGCCGAACTCGCCGCGGC
CAAGCTCGCCGCCCAGCACGTACTTGTCGTCCAGGTCCCGGCCCGTGGGGTCCCGCAGCA
CCACCAGCCCCGCCCGCGCCGGCGGCCCCGCCGCGCCGCGGTTGTACGCGACGGTGTAGG
GGTTGGCCTTGGCCTTCCTCCGGTTGTTCTTCCGCTCGCCGCCCCCCTGCGTCGACGGCG
CGCCGCAGCAGTTGCCCATGGCGGCGTCAGAGGCCCGGCGGCTACGGCCGATTAAGGGGC
GGACGGCCGGCGGCGGGAGGTAGATTCAGCGGACGGGGGCGGCTGACGGCGGCCGTGGAG
AAAAAAGAAGAGGAAATCGAGGGGAAACCAAATGGAATCCGGGGAGGAACTGCTGCGCGC
TTTGTATGTAGCGGTGCTGCTCGGGAGGGGCCTGGCGTGTGGGCTGGGGCGGGGAGTCCG
CGGACTCCGCCGGCCGGCTGGCTGGCTGGATGCGTTGTGGGGCGCTTCTAGAGGAAGGCA
GCCATTAACAGCGGCGGCGCAGCAAGCTTTTGCACTAAGCAAAGAAAGATGAAATCTTTG
TGGCTCGCTGGTGATGGTAATGATGGTGTGGAGAAGATCCAAGCCTTTAGGGGTGGAGAT
TTTGCGGGAATTTGAGAGGGATTAACTACTAGTAGTAGTACGTACTGTAGAGTAGTAGAA
GGAGGAGGATAATGGGGCAGTTGGTGCCGTGTTTCTAGAAGTTGGGCAGTTATTGTCCGA
GAAATAGCGCAAGTGCCCATCCCTCCTCGTTTCCGTTTCGAAAGTCCACACGGAATTTCC
ATGCCAGATTCTCATGTTTTCATACTACTCCCTCCGTCCTCTCAACTTTGTAGTACTATA
AAGCGATCTAAACAAATTTTATATTACTTCCTTCGTTTCAAAATAAGTATCTCAACTTTA
TACTAGATCTTATTCTGAGACGGAGAAAGTGTTAGTTTATAGAGGAAGATTTTTTTAACT
CAATATAGATGCAACATATACATACATATATTTGATACATCTGTATTTAAATGCCCCATG
CCAAGCGCGGCATAACTTTAGTGATTTACAAGTACAAAATGTCGGCTAAAGCGATATATC
AACCTGTACAAATCCCTCTTTTTAAAAAGGGAATCTTTGTGGAATGGTGTCAGAATAGTA
TAGGATCGGTGGGGGAATTCCCTGATGCTGTTTTAAACGACCATTTTGCAATTCGGTTTG
TGGTTAGCTGGCAGAGACACATTGGACTGATGACGATAAAATAAAGTAAGTAAAGCATGT
GTGAAGGAGGCCTGGTGGCACTAGTAGAAAAATGGGACGAGGACTTTTTCTGCAGCTGGA
CCAGACGGCGACAAGCGGGCCAAGAAAACGAGCCTGGGAGGAGGAGGGTTCGGTGAGGGC
GATAGCGAGATCCTTTGCCTCCTCGTTGAGCCTGCCCCGTTCGTTACGCAGTTTTGCGGA
TAAAAATCTTACGGAGGAGTCGTCTGATTATGATTATTCTAGCGGTAGTTTAATCTGCGG
TCGTCTGCTGACCGGGAGCGTCGTTGCTTGACGAGATCAACGACGAGCGAGTAGGTGTGC
GGGGAAACGGATGGCCGAGTTGAGTTGTTTAGACTTGACTGGGTAAGGAGCTGATGACGC
GTTTGCTTTTCATCTCTGTTTTTTTTCTTTTTCTTTTGACACTTTGTATACTTGCTTTAA
CTGGGTCTGTTTGAGATAATGAAAACCAAAAACCAAGTTCGGTTGCATGTATGTAAGTTA
GCTGCATCGAGGAAACAATTTTGAGCACCGTGTTTGGTTGATCCACTCGCGTTTGTTAGA
CAAACTAATACGTTGTTTGGTTGCGGACGATGTATTGTGTGATCAACACTTCTCACTAAT
AATGATCTTAACGCATACGGCTTCAACATTATCTCGGTTCTAGCTAGAAAACAAATGACA
ATTCATCTCAATTACTAAGAAATGGCACTACTTAAGAGCCACATGGCTGAATAGGGGGGA
ATCACCGATACTAAGTACTAGAAGTCCATCGTTTTCCTCCTTTTCTTCTTCTATTGATGT
TTCTTCTGTTGTTGTTGTTTCTTCTCATTTTATGTTGTTGCATTTTCTTTCTTTTTAGAT
ATTTGTCTAACTATTCACTAGTAGAAAACAGACCTTACGTTTGGATCATTAGTTCCGGTT
TGATTTCGACCCGGGACTAATGTGACCATTAGTCCCGATTTCAACGGCTAGG