Contig Data
morexGenes
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Map Locations of contig_1559746 (3949 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1559746

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10766 2 868 bp MLOC_10766.1 Available Available LOC_Os02g41904.1, FRAME:-3, EVALUE:9e-23, 13102.m04631 protein DEF7 - Defensin and Defensin-like DEFL family





CDS Structure of MLOC_10766






Contig Sequence (3949 bp)

>contig_1559746 3949 assembly3_WGSMorex_rbca.fasta
ACCCCCTTTTAGTCCCTAAAAGTCCCTCCTGTTTTTATTTCACATAGGAGTAAAAGGGGC
TTTTTTAAATCCCTAGAGCAAAAAGTCCCTGTAAAGAAACACCCCCTCACGTACATGCTG
CATGCAATGAATATAGTGTTGGGTCCGAAAAAGAAAAAACGAGCCTGATGTGTGCTACGT
GCTGAAAAACTATGTATCACCCACTCATAATCTATCTTGGTTCATGAGAATTTAGTTTTA
AGCCCTATAAACCGCAAATAAGGAAGTATGCAAGAGGGAAATGTCCCAAATACTAGAGTG
TCGTTGCTGTGTGTTTGAATGAACATTTGGGGTGGGGTACCACATCTTAATAGTTCACTT
AGTGCCAGTGTAGGATTTTTGTTTTCCTCTTGATCATTGTTGGTGCCTGTTTAGACTAGT
TAGGTTTCGTATCAGCAAAATCAAGTGATTAATTCTGTACGTCAAGATTATGAGCGCCCA
ATTGTATGCTCACACTAGTGTCCAGGGACGGAGCTGCATCTTCATCTACACTGCTGCACA
CGTTTGATCTAAGTGTTAAAGTACCAGTGCAAAACAACTTGACTCTGTTGCCCATGCAAC
AGGGTAGCCTCTTGATTTTGTTTTCCACAAAGCATCGGTACTTGTATAGCATAGACGCTT
ACTTAGTCACCTCAAAAAAAAAAACATCCGTGTTTAAAACATAATGTATTTTTTTTTCAA
GCAACTCTCTAGACATCTTATATTGTCTATGCTTAATTATAGTTTGACTCGATGGATGTA
TATACATCCTCCTATTCCCCCTGAACCCCACGCTAAGTCACCAACACATCCTTAATTATT
ACTTGGAGGAGTATCCAAAGCGCTTTATCAAAATATCTTCATAAGATAGAGCCTCGAGGC
TTCTGCAGCTTGGTTTGTTCTTTCAAGCAAATGGTGATCTATGCATGCCTTTCTTCGATG
TCCGTGTTCAATATTATTGATTAAAAGTGGAAAAAATAAACTTTGTAGACCAGGTTTAAT
AAAATTCCAATGCACATAAAAATTCCGCATAAGATAGTTTGTATGAGTACAAGAAGATCC
GTACTCATGTTAATGCTCTTTTTTTGCGGGGGTTATATATGTTAATGCTCTACTTTGTTA
TTTTCTTGCACAAAAAAGAAAACTCGTTGACAAGGTAATGCTCAACTTATACTTCTTCAC
CAGTTCATGTATACAAATGAAATGTTCATGCAGCTTCATTGGAAAAACGTCTCGTCACAT
AAAAATGTTGTAGTCACAATAATAGTCTCTTTGAAAATGATCACACTTACACATATATAT
AGAGAGAGAGGGGTAGAGAGGTAGATGCATTGCACACCATGCTGATATAACGCCACCATA
TTTATAACACCACCACACACAAATCAGGCACAAACACGACGTACAGCCAAGTAAACTACC
GAGACCCCGATTGGTTTTCTACTTTATTATGAGAGTTCCACTAAGCAGAACACACCGACG
AACAGAACATAGCTAGTTAACGGCACGGATGCTAGCTCTAGGTAAGAACTGTGACGACGA
ACGTGGACGCGTCGATCGGACGTCTCGGCGCTGGCCGGCGGGACGGACTAGCAGGGCCTC
TTGCAGAAGCACTTGCGCTCGACGTGCGGCGTGTGGCACTCGCCGCCGGGGAAGTTTTCG
GTGCGGCAGACGGCGGCGCAGTTGCTGCTGCTGAGGCATGCACCCTTGAAATTGTGGCTC
TGCGACACGCAATCCCGCGCCCCCGCCATCTTCACCCTCGTCGCCCCCATCTCTGCATGG
TGGCGTTATTATCAGTAAACATAATTGTGGCTCAACGAGACGACAGTAAGCAAAGCATAC
TCCATGGAGCAAACCCCCACAGCTCGCTCGGTGGGAAGATTAGTGTGTACCTGTGGCGAC
GAGGAGGACCAGCACGAGGAGGACGGACGCCGCCATGCGACGACGAGAGAGCGCCATCGA
TCTGCTCTGCTCCACCTTCACCCGAGACGACGACGTACTGGACGACGTACTGGACCGACC
AGTGAGGAACAGAATGTGCTGTTTATATAGGCGGACGGCAGATTAGTGGGCGTCGTGGGG
CGTAGTGTTCTTCTGAATTTAATTGCTCACCCATGCAGCCACACTCCACCAAAGCCATAA
AGTTGTGATAAATCCATTCCATTCTCAAAGTAGCGGAGTGGATGAGTGGTCATTTCACAG
TCTGGATTTGGTCCAGGGCTTCACAAACGCAGTTGCTGCTCACCAACCCGGTTGACGCCT
CCTAGTGCTGCTGCAGTGGCCCATTGCACGTTGCCACCCACGTCCATTATTTCATACCAT
TTCCATGTCGAAACCGGTGGATGGGGACTGGTCATTTCACGGGCTGGATTTCCTTACCAA
TGAATGGTCATCAAGATCACATGCTGCTCGTCGTCAGGCAGGCTGAGGATGGATTCCTTT
TCAAACTGGTGGGTAAGAAGTAACGAAGACATAGAAAAGATTTACAGAGAAGTGCTAGAG
TATGAAGAATCAAAGAGCATCCGTAAACCGCACACAAAACATGCACGGTGTTGGTAAGAA
GAACATGAAGATCTTTTGCGATGAGTATGTGTGCGAGCAATTATGACTACGCTAAACGAT
TTGTAGTAGCAAAAGAATATGGTCACGGAAAAACAAGCTATGATGATATAGCAAGCTAAA
GAGGATATATGTAAGAAGATTTTAAAGAAAATATATGGCGGTACTTGCATAATTATAAGG
AAAACTAATGAAAGGTCCTATCACTATATTTAATAGATGACCCAAACTTGACTAAATCAG
GAATTAAACCCATTAGGTGACACCACTCTGCAACCCAAATATTTTACCACAATGATAATT
ATCGATAGTGACATTGCTATATATGGGCAAGCGAAATAGTCAGGACATATGGGCACAATT
GTAGAATCTACTGAAATGCAAAACACGCACACCACATTCACAAACGCACACACAACTCAT
AACCAACTATGCATCTAACTAGATCTACAACCTCTACATGCATAACATGTTTTGAGAAAC
TTCCGAAGCAATTCAACTTTGAGAGTGGCGGGTACGTCGTCCTACATCTGGTCGTAGACG
TGTGGGGTACATGCATAAAAGGGAAAATACCCCGGGTGAGACAACCAAGAAAAATCCATG
GATTAACCTTGGGTGGGTTGCGTGTAATATGCACTTTTCATACCTATCTTCTTGTATTTT
GGCTATGAGATTGGCCCCAATAGGGGTCAAAGATGCCTTTAGACGTGCTGCTTCAACTAA
ACCCGACTATATTACATTTTATCTTAGCACCACATTCCCCAATGTTTAGCGCGAGCATGA
GTGTGTGCTAAGAAACCTTAGCATCCAATATCGACAAACATTGCTCATGTCATGCTAAGA
AAAAAAGTATTACCATCGGTTCTTGTTGAAGCACCGAGTCTAAAAGAATCTTCCCCGCTA
TAGGGGCCATGTCATAGCTAAAAACAAGATCAGGGGATGTTTCGGTGGGGAAAATGCATG
GAGAATAAAAATGGCTAGCGGGTCCCTAAAATATGTGCTATGAAAAGAGTATATTGAACA
AAAATATATTCTTATACTCAGTTTACTTTCATATTTTGTAGCACCGACACATTGATTTTG
CTTTAGGCCTCAAAGCCCACGATCAATTTGATGCACCAAATATTTTTTTTTGAAAAAAGA
GGTTGAAACCCCGACCTCTGCATCAAAAGATGCACACAATCATTTTTGTTAAATTATTCA
ATAAAGGCCTGGAGAAATATATATCAAACAACCCTAAATCATCATGCCACACACAATACT
AAACTCAATGATGGAGGATGCCATCACAACGCCCCATTAGTTAGATCCAAAGTCATCAAT
CTGATGCACCAAGTGTTTACACGATTCACAATGTATACAATAATGTCAC