Contig Data
morexGenes
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Map Locations of contig_1559699 (6545 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1559699

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10735 1 1853 bp AK358866 Available Available None





CDS Structure of MLOC_10735






Contig Sequence (6545 bp)

>contig_1559699 6545 assembly3_WGSMorex_rbca.fasta
GGAACATCCTCACATCCCTCGATCCGCCCCGCGAACCGTCCCGCGACCCGTCCCACGATC
CGCCCCGGTCCCGGGCCGCACCGCCGCCCCCCCCCCCACCAACAAGCACCGGCGCGCGGC
GGACGAGGACATCCGGGAGGAGGCGGCGCGGCACCGGGCCCCGGCCAACGACTTCTCCGC
CTGGTACGAGCCCTTCCCGCCGGGTCCCGGGTCCGCCGCCGACGAGCGCTACTCCCTGGA
CGAGATCGTGTACCGCTCCAGCTCGGGCGGCCTGCTCGACGTGCGCCACGACATTGCGGC
CCTGGCGCGCTACCCGGGGTCCTACTGGCGGGACCTCTTCGACTCCCGCGTCGGCCGCAC
CGTCTGGCCCTACGGCTCCGGCGTCTGGTCCAAGAAGGAGTTCGTGCTCCCCGGGATCCA
CCCGGACCACATCGTCTCCCTCTTCGAGGGCAACTCCAACCTCTTCTGGGCCGAGCGCCT
CGGCCGCGACCACCTCGCCGGGATGAAGGACCTCTGGGTCAAGCACTGCGGCATCTCCCA
CACGGGTTCCTTCAAGGACCTCGGCATGACCGTGCTCGTCAGCCAGGTCAACCGCCTCCG
CCGCGCCCCGCTCTCCCGCCCCATCGCCGGCGTCGGCTGCGCCTCCACGGGGGACACCTC
CGCCGCGCTCTCCGCATACTGCGCCGCCGCCGGGATCCCGGCTATTGTCTTCCTCCCGGC
CAACCGCATCTCGCTCGAGCAGCTCATCCAGCCCATTGCCAACGGCGCCACCGTGCTCTC
CCTCGACACCGACTTCGACGGCTGTATGAGGCTCATCAGGGAGGTGACCGCCGAGCTGCC
CATTTACCTTGCCAATTCGCTCAATTCCCTCAGGCTCGAGGGCCAGAAGACGGCGGCCAT
TGAGATACTGCAGCAGTTCGATTGGGAGGTCCCTGATTGGGTCATCGTTCCGGGAGGCAA
TCTTGGAAACATATATGCTTTCTACAAAGGATTCGAGATGTGCCGTGTTCTTGGCCTGGT
TGATCGGCTGCCACGGCTTGTCTGCGCGCAGGCCGCCAATGCCAACCCGCTGTACCACTA
CTACAAGTCAGGATGGACCCAATTCCAGCCACAGGTGGCCCAGCCGACATTTGCTTCCGC
GATTCAGATCGGCGACCCGGTGTCGGTCGACCGTGCGGTGGTCGCACTCAAGGCAACAAA
TGGCATCGTCGCAGAGGCCACGGAGGAGGAGCTCATGAATGCAATGTCCCTCGCCGATCG
CACAGGCATGTTTGCCTGCCCGCATACCGGGGTCGCGCTCGCGGCGCTCTTCAAGCTCCG
GGAAGAGGGCACCATCGGGGCGAATGACCGTACGGTGGTCGTCAGCACGGCGCACGGCCT
CAAGTTCTCCCAGTCCAAGATCGACTACCACGATCAGAAGATCGAGGACATGGCCTGCAA
GTATGCCAACCCTCCGGTCAGCGTGAAGGCCGACTTCGGCGCCGTCATGGACGTCCTCAA
GAAGAGGCTCAAGGGTAAGCTTTGAGCATGCCCTCGTCCTCCTGCTGCTGCTGACCCCTC
CGATTGGCTTCTGCGATTCGACTGTCTTGTGCATCTGATTCAAATGTGATTGGTTTGCTG
TGTGGAGCATTCAAACCCTTGATTTGAAATCTTGTAGGTGAGTGAGACTCTTGTAGGCGT
GTCCCTGGGAATGGTTAGGGGGTGGGGTTGATTATCTCTTGTACCGCGTTGTGTTCTACG
GATAATAAACGATTGTGTTGCCGTTCATTGAATAAAATCATTCGGTCTGTTTGCTCCATG
TTGCACTGGCTTGCTGGGAATGTCCAGTATTTGAAGTTTCTTCCGAAGGGCAGCACCTGT
CCTCAATAATCTTTTCATAGAAACATTTGTCCTCATAGTTTCATGTTCCTCATCGCACCA
GCAGCATTGATCATATTCTGCAGATTTTGCAAGAACATGAGCTGTCTCATTGCTATAACA
TTACATGAATAAAATTAAAATTACTACTCCGTAGAGAAAAACATTGATGCTATATTCTTT
ATCCCTTGGACTTTGCACCTTATTTATCATAGATAGGCGGATGGTCTGAACTACCTCTGA
AAACTCTGAACTACTACATGTATCTTATGAAAACCTGAACTCCTGGCAAAAGACGATAGC
GATGCAAGGGCTTCAGCCACTTCTGAGATTCCAACATGGTGAATAGCACCCCGATTCACT
TCCTGCACCGATCCATGAACACCGGCGCCTAGACCATCAACATTTATCTGCAAGACTGCA
ACACATCTTCCTGTGGCGGAGACCATTTTCTGTTTCATGATGATGTCAGAGGTCAGGTAA
GGTTTTGATTTTTATTGGAGCTGTTCCTGTTTCCCCAAATACCGCATCGTCTAGTTGTTG
CCAGGGCCATATATAGCATGGAAATCTGAAGCTTAGCCGGTTCAGAATTTCAGACCAATA
TCCATGGCCTGATAACAACAAAGCTTGTTAGCTTCAGGAAAATACCATATGCTTATTTTA
TTTCCCTAAAAAAATACGTATTTTATTTTTTCCCATCCATAGCTCTTGGGTATATTGGCA
ATGTAATAAGAAAAACAATGATCCATCTCTTCCTTATACGATTACAATAACAACAGTCGT
ACCTGATCTGACTTGGAGTTGAGAACCTGTGCCAGCCCTTGCGGGCAGACAAGTATGGGC
CAGCCTCCAAAGCACCACGTTCATCTTGTTAGGGCACTGAATTTTGAGCCATGGCTTCTC
CATAGCCTTCAGGTGTGACGAGAAACCCTTGCCTGAGGAGCGGCGTTCAGACCCGAAAAA
AGAGTGTTCTGGCCAGGTTGTAAGCCTGAGAAAATCTCAAGCTTTCCTCTGAGTTTAGAT
GGTAGGAGTGACTTCCCCTCTTCGCCTCGTTCTTCCTTGTAGTTTTAAAGCTGGTGTCTG
TGGCCTATTTTTTTATTTTTATTTATAAACAAGGCAAAAGATTTGTCATTTTCATCGATT
AGAAGAGAAGTTTTAGAGGTTAAGGTCCAAGGCCGAATTACAACAATCACTCGCGTGGCA
TTACGTTACTCAAGTGCCTTGCTACGCAATGCTACAAAGATAGGTCTCATCCTAGCGACG
ATGACTCCCACTGAAACGGTTTTATTACAAAAGATTTGCGTATTCATCTCTTTCCACAAC
CCCCAAGAGATTAGCAACATCAAGGAAGCAAGCGGCCTTCATGATTGTGTCTTCTTGGTA
TCATTGTTGCTCCACCTCTCTTTAGCGGAAGTCGCGTCACCCCAGTCAGAAGGATGTACT
TCATGGAGTTCAATACAATCTTTGACCATGCGCCAAACTCTGATAGTGTGGACCATCTTG
CACAGTTGGCCACCCACGACGATGAAGCCTGACTGCCGTCCAAATCCTATTTTTGATTGC
CATTTTTGCGAAGAACTTGCATTTAGAAGGTGCCCAAATCTTCCAAACGGTCGGGATCAT
GGCCCTATCAGTTTGGCCAAAGAATTGTGCCTTGTATGCCGATGCAGCCGAGTAGTGTCC
GTCAGTAGTGAACGTCCAAGTGATAGTGTGAGGCGTGTCGATGTTAAGGTGGACGTGGGA
GAGCCTCTCCGAGAGGGTGACAAACTCAAAACCATGTTCTACGGTGATGCCTTGAAGAAT
GTCCACCTGGAAGTCCAGTAATTGTCATGCAAATCCATTTGAACAAATCAATTTTCTTCT
TCAACAAGTCATAGATTTTTGGAGCCGCGTCTTTGGGTCTAATCCCATTGAGCCAAGGTG
ACTCCCGGAACTTGGCATACCCAACTTGGACCTTGGTATCCATGACAAAGATATCTTGGT
CATTGACATCACAAGGGGTTCCCAAGCTAACCCATCGCTTGTCCGGGTGAAGCCACTCAG
CCCACAAACACCGGAGGCGAAGGGCAGTGGAAAACTTGTCGAGATTTAGGATTCTGAGGA
CTTCATGCAGTTTGGAATTTCACACTTGCTCCCAATTTATCTTTCATTTTCCATCTATGA
CCTTATCACAACCCACCTAAAGGAAAGCACGTCTAGGGCATCGATCTTCTTCTTGACTTC
CACGGGTAAATATAACACCGTCATGCAGTAGATAGCAATCTCTATGAGGACCGACTTGAC
CTAGACCGCACAACCCGCTAAGGTAATATGCCCTCAGACCCAGGAGTGATATGACTATCA
CTCTTGTCCTCAAGGGGCTTATCATGAGTTCTCTTCAACCTCTTGACAGCCAAAGGCAAA
GAAATGTATATTCATCGGAAAGGAGTATGCTTGGCCGACTAGGACTGGTGGATGCCTGGA
AGATCCACATTTTCACAGCAGATTGGGGAGATAAAACTTTTGTAACAATTTGTGACAAGG
CTCGTGACATCCCCAAAGTGCTTGAGAATACTCGCGAAAAACTGGACATCCTCCTTAATG
GGTCAAAGAAAAACAATGGTGTGTTGTCCACGTAAATAGAAGTATGGATACGCATAGCAT
TCCCACCTAGGGGATGAGGGTTTCTCTGAGCCGTGGCCTTTACCAGAATGTAGTGTAGGG
CGTTGATGACGAGCATGAATAGCGGCGGCACGGGGGCAGGTTCCCCCTGCCTCAACCCAT
GCCCAAGCTTTATGGGATCGTCGGGCACACCATTGAGCAGAACACGCGACAAAGCCGAGG
GCAACAGTGTAGAAACCAACCTATGAAGTGAAGCGGGAAACCAATGTCTCGAAGAGGTTC
GGGAAGGAAGGGCCACCGAGCTGAGTCAAAGGCTTTTTAAAATACCAAATTTGAAGAGTA
ATGATGGTGTTTTTCCTATGGTAGAAGCGTCTCGCGAGATTGCACACATACATGTGTTAA
ACATGTGTCAACATGTCACTTTGCATATGGCACATCCATCATCTTGTGTAACAAGTCTTG
GGTAGTTAGAGATAGATTCTATTCATGTTTATCTTCCTATCCATTCTCCCTATCCCACAT
GTATCTCCTCTCAGTTTGTTCGCTGGTAACAACCTATCGATGTAACACCACGATACATCT
CCCGTCCAGATCAATACAATATATGTGCGGGCTCTCCCTGTATGGAGATTCGAGACGCTT
CCATAATATTTCACATGGTATCAGAACTACCCTTTCCCTCTTCGTATAGCCATCATGTCC
ATCCTTGATTCGACTATGTCAACATCCACCTCGATTGTCTCCTCCGGCCTCAACAACAAT
GTCTCTGAACCCCTCACCAGATCCAACTACGTCCTCTCGCGTGCTCAAGCTCGTTCCTAG
ATCATGGGGGCGGGTCTCTCTGGGTACGTTGACAAAACCGCAGAACAACCTCCCAAAACC
ATAACCAGCAAGAATGTCGAGGGAAAAGATCAGGTTGTCTCGAACCCTACCTATGCGCCT
TGTCTAATCCAAGATCAACAAATCATTGCATACCTCCCGTGCGATCTTTCCAAAGAAGTT
TTAGTCCAAGTCGCATATTTGGAAACCTCCCATGCCATCTGGTCAGCCCTCGCCAATAAG
TTCTCTGCCCAGTATCGAATTCAGCACAACCACATCCGCACAGCTCTCAACACAGCCCAG
AAGGGAACTAAATCCGTTGTTGCCTACTTCGGTCACATGTGTGTCCTTGCTGATGATATA
GGAGCGACAAAAACCATAGATGGAGATGAGCTTGTGTCCCACATCATATCTGGGCTTGAT
ATGGACTATGAGCCCATTATCAACACTTAAGATGTACGTGTTGATCCGATCATGGTCGAC
GAACTCTTCGGCATGATGGCCTCATTAGACCAATGAGACGAGATGTTCCAAGGCATATGT
GCTAGTGCCTTCAAGTCATCGGCCAATGCTGCTTCCCGTGACCGTGGTGGCGGCTCTCGT
CGTGGTGGGAACGGCGACGACGACGACGAAGACCACTACTCCAACCCCAATGGCGCCAGC
CACTACTCCAACTCTAACGATGGTGGTGGCGTAGGCCACTATGGTGATGGTGGTAGCCAC
TACGATGGTGGCCACTACCCCAACTCAGACGGAAGTGGTGGACCAAACTACAACAACAAT
GGTTGTCGCCCCTTCTACAACAACAATAGGGGAGGCCAAAACAACTACAGCAACAACTTT
CGAGGGTACGATGAATACGAGGGAAAATGTCAAATATGTAAGAAAAATTATCGTATAGCA
AAAAAATGCAAGTGGCTCTATGCAGAGGATAATTCGTAGAAGAAGAAAGTTGCCACTAGA
GCCAACATGTCCTATGGTGTAGACACCAATTGCTATGTTGACTCTGGTGCAACCGATCAC
ATCACCCATGAGCTCAAGAAGGCCACGATGCATGAAAGATACCATGGGCATGATCAAGTC
CATAATGCGGGTGGTAGAGGTATGGAGATAAACAATATTGGTGTGATCTGCGTAGGGTTT
TTCGTGAAGAGGAACGGGTNNNNNNNNNACAATGTGGGTAAGTATTTCCCTAGATTAAGA
AACCAAGGTTTATGGAACCAATAGAAATATCAATCCTCAACTGTCTTCAGCGGTTGCACA
CAAAA