Contig Data
morexGenes
Links



Map Locations of contig_1559661 (3100 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1559661

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10717 1 815 bp MLOC_10717.1 Available Available None





CDS Structure of MLOC_10717






Contig Sequence (3100 bp)

>contig_1559661 3100 assembly3_WGSMorex_rbca.fasta
AGTTGGTCGCGAGATCTTATGGGTTTCANNNNNNNNNNNNNNNNNNNNNNNNNGGACTAA
AGGCTTTGTTGTTGTTTTTGTTTTTTGTTNNNNNNNNNNNNNNNNNNNNNGTTGTTGTTG
TTGTTGTTGCTACTCAGAGTGACATCTTGTGATTCTGTGGGGGAAGAATAATTTCGGCGG
TACATCAGAGAATCCTGGAGCCTTTTCCCCCCATTGCCTTCGTTCTATACTGCTGAGATA
GCAGTAGTTAGAATACCTTGTTTTTCGGACACTATGGGAGAACACACACACTTTGAACGA
GCAAAGACCCAGCTGAGAGCAGTTCAAAACGTTTTTTGCCGAAAGCCGGTGGTAAAAAAT
TAACCAACATTAGACTTGGGACAATGGTTGTTGAGTTGAACAGAACCAGTGGAGAACACC
AACTCAGTCTTCAGCTGTGAATTTGAGGACTTGATTAGAATTGAGTTGGATACATTTTAG
GTGGTGCTATTGAATTGCTTTTGTTTGAACTCTTACACTAGGTTCATCATTTATTGTATC
CTAGTACTTGCTCTCAGTTAGTCAAAGCTAGTTCAGTTTGTAATACATTTTTGTTGCATT
TGGCAGAAATAGCAGTTCCACCACCAGCCTATGGGTACACAAGCAATCCTCAATACCAGG
TTTGTATACTTTGTCCTACTCATTCACTGCAATGTCTTTGTATTTTCAGTCTGGAGTAGT
ATCAATGTACAATATGCATACCCCACAAGAGCACACTGCTGGTTCTGTTCTGAATATGGC
TGCTGATAAAATATAATGCACTTGTTGGAAACTTAAATTGATATAATTTGTCAAATAAAC
TTTATTGTGTCAGTATAACTGTATTCATCCTGATGTCATAATTAAAGGTAGTTATTCATA
TATTGGGAATTTCTTTTTGAAATCAGATATGCCACTTTTTTCTGGGACCGACCATCTTAG
AAATTGTTAAACCAACATCCAACTCAGTGGTTGGTTTTTCACCCTACTTTAAGATATTGA
GCATCATTTTAATAGTGCATACTAGAAAAGAAGTAAAAAAAGTATATACTTGGAGTTACT
TTCCATGATAAATCGATCGACTTTATTTCAATGTCGCCAATCTTTATTATGTATCCTACT
CCCTCCGTTCCTAAATANAAGTCTTTCTAGAGATTCTACTACGGACTACATACTGAATAA
AATGAATGAATCTACACTCTAAAGTATGTCTATATACATCCGTTTGTAGTTCGTATTGAA
ATATCTAGAAAGACTTATTTAGGAACAGGAGGGAGTATATGACTAGATGGGTGATCCCTA
CTAACATATTTCTCTCAACATGCAACCGTGTTTGGGAAAACTCCACCTCAAAATGCTACC
ATGTATGCGAAAAGACCCAGCCTTTACATTTTATGGCGCTAACTCGTATTCCCTCTTTAA
AGAAATATAGGTGTGTTTAGATCACTACTTTAGTGATNNNNNNNNNNNTATATTTGTTTA
CGGAGGGAGTATGAATTAAATATTTTACAAGTCTACAAAATACAACAACTCGTGTATCTA
CAGTTTCATTGTCATATTATTGTTTTAGATATGCATATACCATGCAATCAAAACTCTGAA
ATATATTGCAACCAATTCTAGTATCTAGCATTAGTGGTGAAGCAATCAGAAATTTAGTAG
TATTACTATGTAATATTAGTTGTGGACCTGTCAGAATGGCCTGTTGAGAACTTGAGTTAT
GTTTGTAAACCTTCGTTTATCATCTTCCTCAAATCTGTGGTCGGTGGTCCGTAACTGAGC
TATTTTGGTGCACAGGATGGATATCCATACGCCTACCTTCCTCCGCCTCGTCCAAGTGGA
TCTTACCACTACCCAGGAACTGGCGCATACAGCCCGCGAAGGAGATACTACTGACAAAAA
TCCTAGTGCCAATTCCATGCTTTCGTGTGTAATACTGCAAATACAGAACGTTTGCAGTTT
CCAGGGACACGTATGTTGTTTTGCTAGATGGCTGATGCTGGAAAGAAGTAACATTCAGTT
CTGTCTGGATGCTTAGGTTTTCAATTTATGTTCGAGTGAAAAAGCATCATTAGTCCATAA
TCTCGTTTACATTTTGGTCCAAGGAATGATCAGAGAGGATAGAGGATCAACCCTGATATT
TTTTGGGGTTTATACAGTAAAATGCACCTCTCTCGGCATTTCATTGAACACAACATGTGC
AACCTCGCTCCATGTCAATGGCCTCACCGTTGGTTTGTTGCTGCGACTTGCCGCCATGTG
CCTTTGCTAAGCTTGTGGGCGGAGGTGAGGACCAATGACGCGCGAGTGTTGGCGTAGGTC
GCCAGTCGTTTCTTCCGACGAGCGCCATGAAGCATGGTGCTTCTTGACAGCAGCAACACA
CGCAGCGTACAAAGTTTGCAGCCGGCCCGCTTGATTCGATCCGGCAAACAGGCGAACACA
CACACACAGCAAGCATTCTTGTACATCGTCATTTGATGCGTTTTCAGTTGCCGTCACGTG
TCGCACTTTGAGCGCATTCTTTGAGTTTTATTTTTATTTTTCCGCACGCGTTTCCGGCTT
TTTAGATTTTTTTTTGGTGTTTCGGTTTTTGTGGTCTTTTTTAGTTTTTAGTTTTTTTTG
ATTTTTTTTACGAGAGACATGGTTTTTTCTGTCTTCGTGAGAGACACACAACTGTGCCTT
TTGATTTTTGATTTTTTTTTTTGCGAGAGGCATGGTTTTGTCTCCGCAAAAGATACGGCC
GTGCATCTTAAAGAAAAAAAAATGTGTTTTCTGTTTTTTTCCTACGAGAGGTACGATTTT
GTCTTTGTGAGAGGTATGCCCGTGTCTCTTGTCAAGGAAAAAGACATGTTTTTTTATGAG
AGGCACAATTTTGCTTTCGTAAAGAAAAGAAAAGCAACAAAAAAAAAACAACAACATGTC
TTTTGTTTTCTTTCTATTGCGGGAGACATGTTATTTTTGTCCGGTTTTTGTCCGGTTTTT
TGTGTGAAAAAAAGTTTGTCAAAACCTATCAACATGAAATCTACTCCCTCCGTTTCAAAA
TATAAGACCTTTTTGAGATTTCACTAGGAGACTACATACG