Contig Data
morexGenes
Links



Map Locations of contig_1559596 (4727 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1559596

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10689 3 3075 bp AK355198 Available Available None





CDS Structure of MLOC_10689






Contig Sequence (4727 bp)

>contig_1559596 4727 assembly3_WGSMorex_rbca.fasta
CGCACGGAGTCCCTCGGACACACAGTCCGGTCGCTCGACTGGGCCGGCCCAGTTCTTTTT
CTTTTCTTTTTCATTTTGTTTCTTTTTTCTTTTTTTTTTGGTTCATTTTTTCTTTCCTTT
TCCTTTTTCCTTTTTTATGAAAACGAACAAATGTTAAATTTCCCATTATTTTTTGAAAAC
ATGAACAATTTAACAAAAAATAAAGCACGTACATTTTTGGAAATCTTGAGAACAAATTTT
AAAACCTGGAACAATTTAGAAAAAACATGAATAAATTCAGAAGCACGAACAATTTTTTAA
AGCACAAACATTTTTTAAATCTTGAAAACAAAATTTTGAAATGGAGAACAATTTTGAAAA
ACCTCAAACAAATTTGAAAGCACGGACAAATTTTTAAAGCAGGAATATTTTTTGAATCTT
GGGAATAAATTTTAAAACCGAGAAGAATTTTAAAAATTCTAAACAAATCTGGAAGTGCGA
TCAATTTTTAAAGCACGAACATTTTTNNNATCTTGAGAACAAAATTTTGAAACGGTGAAC
AATTTTGAAAAACCCCAAACAAATTTGTAAGCACGGACAATTTTTTAAAGCACGAACCTT
TTTTTGAATCTTGAGAATTAAATTTTAAAACGGAGAACAATATTGAGAAACCCCGAAGAA
ATTTGAAAGAGTGAACAAATTTTTAAAGCAGGATCATTTTTTGAATCTTGAGAACAANNN
NNNAAACCGAGAACAATTTTGAAAATTCCTGAACAAATTTGGAAGCACGAACAATTTTTT
AATGCACGAACATTTTTTGAATCTTGAGAACAAAATTTCGAAACGGAGAACAATTTTAAG
AAAACCTGAACAGATTTAGAACCACGATCAATTTTTTAAAGCACAAAATTTTTATGAATC
TTAGGTATAAATTTTGAAAACGAGAACAACTTTTTGAAAATATAGAACATTTTATAAAAA
TCAAGAAGATTTTTTAAAATACTGAACATTTTTTGAAAATTCAGAATATTTTCTAAAACA
GAATCAGAAAAAATAAAGAAAAAAGAAAAAGAAAAAAACGGTTCAGAGAATCTTCTAGAA
GTTTCTCAAAACTTGAAAAAACAGCTGGAAGAAGGTTCCCAAAACCAGGACGCTGCAACC
CGCTAAATTGGCCAACCGATTTAAAATCGCTCGCCTCCCTGCTCTGTGCGTAGTCCCGAC
ACCGCTTCACACAGAGAGGCGAATATGATATTGCATAGTATATCTCAAAAAAATAAGTTG
TGTTATAGTACTATTTCAGTCAATTGGATAGAAATTGACTGACCCTAGTCCTAAAATCCC
GATAGCCACTCCCTTCTACTTTCTCCGTTTCTAAATATAAATCATTTTAAAGATTTCACT
AAAAGACTATATACGTATGTATATATAGACATATTTTTGAGTATGAGTTCATTCATTTTA
TTATGTATACAGTCTCTTTGTAGAATCTTTAAAAATAATTATATTTACGAACGCAGGGAA
TATTTGTATTGAGCTTGTAGATGAATGCAATTTGGCGCCTTAGGCACCTTTCCCCGTTAA
AAGAATGCGAATGCGATCACTGGATTCAGCTTGTGTTAAGCTCTTATTTAGTTGTTCAAC
CTGACGCACGCAATTGCGTACAAATCACATGTGGCCTTTGTTTTTGAGCAGGCAAAATTA
CATGTGAGCTGAACAAGAAAACGCAGCACCGGACTCTCGTCGTCTTACTCCAATTATTAA
AGCAAACAAGATGATCCAGACAGGGATGGTAACAACTGATACTCTATGTACGAGTATATA
TCATGGTTGCCTTTTGCTGCATGATCTTCTTTTTCTTTCTTTTGCGACAGGATCATGATC
ATTATCTTCACAAATGGATCTTGTCACGGGATGCTTATACTATACTACAGTACTAAGCTA
GCTCCAAGGCCATTTGGAAGTTGCAACGGTTGTGCACGCATGTGTCCTTGAATTAGTTAG
TACGTACTCCATATACTTACTACAGTATACAGTCGGCGTAATTATACTATACCCTCCGAC
TACTCGATCTTATTCTTATACCAAGCCGCTGGCGGCGCCGCCGTTGCCATTTTTGTGGAT
GGAGGGCAGCTCGCACTCCTTGTGGTGGTCACCGTCTTCCGCCAACTCCAATGGCTTCAT
GGTGTAGAAATGGAAGCAGATGAGGTAGTAGCCAAGGTTGAGCACCATGAGGCAGGTGAC
GAGCCAGTAGTAGGCGTCCAGCCTGCCCCGGTTGATGTTGTCCTGGAGCCAGTCGCCGCT
GCCCCGCGTGGCGCTCTGCACCGCCGTCACGAGCACCGTGCCCATGTAGCTGCCGAGGGA
GGCCGAGAGCCAGAAGAGCGCGGCGGCGGTGCTGCGCATGCTCTCCGGCGCCTGGTCGTA
CAGGAACTCCATGTGCCCCACGGACGAGAACCCCTCCGCCACCCCGTGGATGGCGTACTG
CGGCACAAGCCAGAACACGCTCATCGGCACGACGGTGGCCGGGGCGTCCAGGAGCCCGTG
GTCGGCGGCGACGCCCCGCCGCTTGGCCTCAACGAGCGCCGCCGTGGCGACGCCGAGGAT
GGAGATGGCCAGCCCGACGGCCATGCGCTGGAAGTAGGTGATCCCGGACGGTAGGCCCGT
GAAGCGGCGCGCCAGGGGCACGACGGCGCGGTCGTAGAGGCCCAGGGTGACGAGCATCGC
GGTGGTGGTGAAGATGGACATGGTGGCCGGCGGGATCTGGAAATGCTGGGTCACGTGGCG
GTCCATGGTGCGCGCCTGCTGGATGGTGAAGCTGCTGTTGTGCGAGCCGGCGGTGACGAG
CAGGATGCCGGCCGACCAGATGGGCAGCATGCGGACGATGGACTTGAGCTCCTCCACGCG
GTGCACCGTCGACAGCCGCCACAGGTCCAGCTTGCCGGACCCGGCGGTGTCCCCCGCCAT
CACGATCGCCGCCCGGTCCAAGAACCTGAATCAATTCATCACACAGCAGCAACATGCAGA
AGCATCCATCAGACCAACTCCGCACACGTGCACGTCTCCATCCACGCTAGCCTAGCCAGT
GGAAGTACGTACGTGCTCTTGCTTTATTTTGTTTCGTTTTCTTCCTTTGTGCATTTCTCA
TAATGTAATGTAACCACCACCAAAAGTAGCCGACATGGGTAGCAGAATTCGTGCACGCCG
GCGGCGAGCCACGTGTGCACTGCACAAGAATGAAATGGCACTTACGTGAGCTGGTTGGTG
TGCAGGAGCCTGCCGTTGGTGGAGATGAGCGCGTCGAGCTCCTTGTCGTGGTAGAGCATG
CGGGGGTCCTCCGGCAGCGCGGCGCGGCGCTTCTTGTAGGCGGCGGCGACGACCTGCGCC
AGCCGCGTGAACGGGCTGCCCCCCGGCTTGAGCCGGACGTAGAGCGGGTACCCGATCACG
AACACCACGATGGAGACCAGCATGCCGATGGCCGGTATCCCGAACCCCCATCCCCACCCC
ACGTTCTCCTGGATGTACACCACCACCGTCAGCGCCAGCAGCACGGCCAACCCCATGGTG
AAGAAGTAGAGGTTGAAGTACTGCCGCTTCTGCCCAGCCACAGCCTCCGTGCCTCCACCA
CCACCATCCTGCTGTTGCTCCTGCTGCTCGAACTGGTCGGCGCCAAAGGCCACCACGCAC
GGCCGGATGCCGCCGGAGCCGAGGGACGTGCACAGCAGCGAGACGTAGAGCACGGCGAGC
TGCAGCCCGTTGGCGCGGCGGCACGGGGTCTCGGGAGGGGAGCAGGGCCCGGGGCGGAGG
GACGGGAGCAGCGCGGACACCACGAGGCCGGCCATGCCGAGCTGGTAGAAGACGGAGCCG
GCGACGATGGTCCAGAAGCGGCCGGCGAAGGAGTCGGCGGCGAGCGCGCCGAGGATGGGC
GTCAGGCTGGACGTGCCACCGAAGTTGGTGAGCGTGTTGGACGCCTCCACCAGCGGCAGG
TGCAGCTGCTGCGTCAGGTACGTGATGAGGTTCGCGCCGAAGCCGGCCGTCGCGAACCGG
TCGCACACCTCGTTCACTGCAGCACAAGCGATGAGAGGGGAATTAATAACTCTTTTTCTT
TTCTTCTTCTTGCGAACGGAGAATTAATAACTCTCCTAAACTAGACAAAATCATGCATGT
ATTTTACTCCCTACTCCATATAATGATATAAACGTCCATTTGCTTGTCGTTTTTTAAACT
TTGGAGCCAGTGATTTAGTTGCTCATTCAGGTTTAATTAGTGACCATCATTCAACCTTTT
GTTTTCAGTGTGACAAACTAACAATGTGTCTGACCGCCGTCTGCGTGTCAAATATTCCGC
AAGGTGCCCCCTCTATAATTGCCAACAGAAGGAAAAAGGAAGAAACCAACTAGAACGAAA
CAAAGTTACCGGCCAGCTACTGGCCAACGGCCAGGAAAATCGATCCAGATTTCCAAAGAC
ACACACACACAGAGAAGCGCAGGTCATTGCACACAGGGAATAAAATCATATAAAGGTCAC
ACGTAGCTCGTAATCTTTGCCTGGATGCGGCCCAAATCGAACTGTAGGAGGCTACAATGC
TCGCTTGTTTCCTCAGATTATTCAGAATCAATCTGCAGATACCAAATGCTGATGCAAGTA
AAACCGCTGGTACGTGCTCTGCTCACCTAGTATGAACGGCATGGTCTTGAAGCCACCCTG
CTGCTTCCTCCTCTTCCGGTTCCCATCTCCGTCCCTGCCCACCGGTG