Contig Data
morexGenes
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Map Locations of contig_1559567 (5578 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1559567

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_10669 2 2015 bp MLOC_10669.1 Available Available LOC_Os07g35350.2, FRAME:+3, EVALUE:0.0, 13107.m03614 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed





CDS Structure of MLOC_10669






Contig Sequence (5578 bp)

>contig_1559567 5578 assembly3_WGSMorex_rbca.fasta
CGACGGCGGACGAAATGGGTCGCCCATTGAAGTTGCTCTTAAAATCATTGCTTTTAAAAT
ACTAAGCTAATCACATCTGTATCAACTGAAAAGAGCCAACCCACTTCATGGTGTATTTAA
GCACACATCCATTACCGAGTGCATTCATGCCTACCTTGGCACTAAGATCCACTATTCTCT
TCCAGTTTGCACATACTCCACAATATCCAAATAGTGATAATTCCCACCACCTTCTCCCCA
AGCACGATCAGATCTATTCCACTGTTAGTAGGAGCCTCTCCTACAATCTTTATAAAACTC
AAAGTAAACAAAAAAAATACCACAGATTCTCATCACAACAATGCCTTCGTCCAACCATAC
TAACTCATGTGGCACCACTGTAAACCGCACCAATAAATACCACTCAAAATTACTATCTCA
AAGTGTGCTCTATACACTGACAAAAACCAACACACCGGTGCCATATATTCAATATGTCAT
AAACAAGACACAAAAATACAAGACCACTCCAGCGGATGAAAGTTTCACGGTTTCCTATTT
CACAGTTGAGTGGACTATCCCGCAAAAAAAATATATAGTGAGTGGCCTAGTTTTGGACGG
TTTCGGAGTTGAAGGGTGAAACTGTGCGCAGTCAATACTACTCCATCCGTTTCTAAATAT
AAGACCTTTTAGAGATTTCACTATATACTACATACGAATGTATGTAGTCATATTTTAGAG
TGTAGGTTCACTCATTTTACTTCGTATGTAGTCTATAGTCAAATCTCTAAAAGATGTTAT
ATTTCAGAACAGTGGAAGTAGTTGAGAGACCAGGAATAATATAGTTTTCTTCTATGTTAA
AATGCAGGGGCCAATTATTTGTTCATCAATATGTGTTTTGAGTCTAAGTTTCGCGTGTGT
AGCTAGCAGTTGGCATGTATAGCCACTAGTGTCACGGACATTCACAAGTTGGCTAGCGCA
ACAAGCCCACCATCATCTGTCCAATCCGCCCACACATCCATGACCACCAGGTGTGGATAT
TTCCATGAACGATATTCATACTGGCTAGTGCCATAGAAAACAATAAAAGTATCGCCAGTT
GTTGGTTGGCCTCTAGCTTTAGTTTTTCCACACAAGTTGACAAAATTTTGACAATAGCAT
GTCGTACTAGTAAACAAGGTTGCATTCAACAATAGGGAGGGTTCAAGGACAAATTTGATT
TTTTTAATGGGAAAACTTTGTTGCTTTATTATTCGTAAAGTCTAGCAATTTCAATATCGG
ACATACACTCTGATGGTACATGTAACCACGACGTGCATAATTTTATGCCACAACACACTT
TAGGTAAGATATGTGTCGCTTAATATACCGTTCGCCCCTCCAATTAACTTCACCTAAAAC
CTTTCTCTAGACCCTAGCAAGTCCTTGATCTCCTTGACGAGTGGCCCGCAAACCGACGTG
TTCATTTCCTCCTCCGTTAAGGATCTCACCGCAATTTAATCATTCATCTCCAGCGCCACC
ATAGACAAGCCATGTTCAAGCGATAACAAAATAGCCCTCCTGCATGGCAACAATTGAACC
AACTCCAGATCAGAGACTGATGGGAAAAACTAACAAGATCCTACCACAAACTTGCCATGG
TAATCTCGAAGGATCGCTCCACCTGTTCCAACCATGGAACTCTTCTAATTGCACCATCAT
CGTTCACCTTAATTCACCCCTCCTCCGTCGCATGCTAGTGCCCCCGAGGTTAGCTGGGGC
GGCTTGTCCAGCCTTTTTGATGCTCAACACCACTCCTCCTGCAGCCCCCGAACCTGGTCA
ACGACCTACACATGATCCTCTATACCCTTGCCATCTCTTGCATTGTTTCGAGCAAGCCAC
ACTTGATAGATGGCCATTATAACCATTGCTCTCTTCGTCTCGCTCATTTCAGTTAGATGG
TCCAAAAACAAATTTCACATTCAGTATGCACTATGTTTTTATAAGATTGAATTATTTGGA
GTTTTTAAAAGATGGAATTATTTGAATATTATTGGGCAAGCGAATATTATTTGACGTTTT
TTCAAAGGTGCTTGCTGCTTCTGCTGGTATCATTAAGAATTATCATGATCTTGGACACCG
ACTGAAAAAATCAGAAAAACCTAGGTTACCATGTGTTCCATCCACATCAGCATAGATGAG
AACTACATGCAACAGGAAATGAGACGACGTGATTGTGTCCGAATGAGCCCTACGAGGCAA
TTGGGCGCCCATGACAGATAGTTGCAACCCAACCAACGATTGCTATACAAGATAATTGCA
TAACTGAGAAGATATGCAAGATTACAAGTGGACAACTAGCTAGGCACACAGAACAGATGG
TTGCAAGCGACGTTTTCAATACAAGACAAGAATGAGCTATTGGTGCAAGCACCCACAACC
CACATGTAGTGATAGCTAGTGCATGGACCCGCGTCTAGTCTTTTCCACACGTGTTGACAA
ATGTATGGAGTTCTCTGTGCTTTTTTAATCCAGTGACAGTCCTCTACCTGGCAGGTAGCC
CATGCATGGTTTTGTGCCTGTGAGTTTGGGACGCATGGAATTCTTCGGTATAAGGTAGGA
GAAATGGCGGGTGTTGCTTGGCTTATTCATTGCTTTTGTGTGGGCGGGGTCCGGAGATGC
TGCCATTAGTGAACATTTATCCGGCTGTCTCTTAAATTTAGGGGCAAGGGAGGGGTACCC
AAGCATGGGTCTTCAGGTACAAGTTGTAGATGATGGACTCGACCAGTCCAAGTCCAAGTT
AGGCGTATATGCATGCTGCTATTGGCATTGCATATATACCCCAATTTTGGTTGCAATATC
GTACGTCTTGTTGTGGCTGCCGTCACTTGCCCAATGAAAAAAAAAATTGTAGCACCTCCA
TCTTACCATTGGTGTCGGCTATAAATTCCAGCCCGCCTGTGATCATTCCCAACTCATCAG
CTCGATCATCGTCTCCTCAAGGCCCAAGCTAGCTAGCTCCACTATGCAGACCACCGAGCG
CATGGCGCTCACCAGTCACCTCCTGGCCGTCCTCCTCGGCATCGCAGTGCCGCTGCTCTT
CTCCCCCCGTGCAGGTAATTGTGGAGCCGATCACGGATCTAATTTCTTTTTCCTCACCCA
CACATAGCTTTGATCTTATATGATTTTGCTATCTAATGGTGTACTTGTATGTGCGTGTGC
TGCTGTTGATTATATGCATTCTAACTATGCAGATGCCGCTTATTGTGTTTTGTATCCTCT
TAATTAATGCTTTATTTTGATTTAACAAAATACATTCTTCATCTAAAAAAATAACAAAGA
CGTACGTTATCCAACAACTTAAATGGTTTTTTCTGAAACATATATAGGCCACGATTTATA
TTAATTGTGATGTTTCTTATGGTACGCGCACGTATACTGCAGAGGGTGGCGAGGTAGGCG
TGTGCTATGGGAGGATGGCGGGTAACCTGCCTGACCCGACGTCTGTGGTTCAACTTATCA
AGAGAAACGGCATCACGATGGTGAGGATCTACGACACCAACCCAACGGTGCTGGCCGCCC
TGGCCAACACCGACATCAAGGTGACGGTGGAGCTGACCAACGAGGAGCTGCCGCTGGTGG
CGGCGGACGAAAATGACTTCGCGTTCCGGTGGGTGCAGAGCAACGTGAAGGCCTACTATC
CGGCCACGCTGATCAATGGCGTGACGATCGGGAACGAGGTCTTCAAAGAGGCTCCTCAGC
TTAACTCTCAGCTAGTCCCGGCCATGAAGAAAGTGCATGCGGCGTTGGATCGCCTGGGCC
TGGCGGACGCCGTGAAGGTGACCACGCCCATCGCATTCGACGCGCTCATGACGTCCTTCC
CTCCCTCCAAGGGCGCGTTCCGGGACGACATCGCGCTGTCGGTGATGAGCCCCATGGTCG
ACTTCCTGAAACAGACCAGGTCGTACCTCATGGTGAATATATACCCGTACCTCGCGTACC
TGAGTACCCCGGACATGTCTATCGACTATCTCTTGTTCCGCCCCAATGCCGGCGTGCATG
ACCGGAATAGCGGGCAAACGTACTACAGCCTCTTGGACGCCCAGCTTGACGCCGTGTACT
ATGCCATGGATAAGCTGCCGTCCTCCAGCCTGCGGGGGATGAGGAAGCTCACATCACTCG
ATGAAGATGTGCTGGTGACCTGTGGTGAGATTCACCACCCAAGCAAAGGCCACCGTGGCG
TGGGAACCCTAGCCAACGCCCAAGCCTTCACCGATGGACTCTTGAGCAAAGTGCTTGGCG
GCGGTAACTCGGACCCGCTCGCCACGAGTGCTGTCGGCACCCCGCACCGTCCCAACGCTG
ATCTCAGCGTCTACATCTTCGAACTATTCAACGAGAACAACAAGCCTGAAGACGAGCAGG
ACTTCGGCTTGTTCTACCCCAACGAGCAGCCCGTGTACCCGGTCGACTTCGTCCATGGCG
GCGCCGGCACCGGTGAAAGCTACTGCGTGGCCAAGGCCACGGCCGGGGACGCAGCCTTGC
AGGCTGCGCTGGACTACGCGTGCGGCCATGGGGCGGACTGCGGCGCCATCCAGCCAGGGA
AGCCCTGTTACGAGCCCAACACCAAGCTCGCGCACGCGTCCTACGCCTTCAACGACTACT
ACCAGAAGAACGGCCGGGCCAGCAGCGCCTGCGACTTCGGCGGTGCCGGCACCATTGTCA
ACCAGGCACCATCAGGTGAGTCCTTGGCTTGGATACGACGACTATATATCCACCCTACAG
CCTACACTGGCGTGGCGGCCAGCCATGACGATTCCATCTATATAGGCCGCTGCGACGCGA
GCTCGAGCTGGTGCGTGGCGAACTCGGCGGTGGGTGCCGAGCGGCTGCAGAGGGCGCTGG
ACTACGCATGTGGCCACGGCGCGGACTGCACGGACATCCAACCTGGAGCACGGTGCTTCA
ATCCTGACACCAAGGTCGCGCATGCGTCCTTCGCGTTCAACGACTATTACCAGCGCCATG
GTCGGGCCGCCGGAACGTGCGATTTCGCCGGTGCCGGTACCATTGTCCGGCAGGCACCAA
GTAAGTTCTCTGATCTAGATTTCTGATTCTAGTTTTCAAGAATAGAAAATATACGCTTAT
GTTTGTTATAATGGTGATTTTATACGTGTTTGTTTGTTGCACTGTTTACAGAGATAGGCA
ACTGCGTGCTGCCGTCAAGGGCCTGAAATGAAGAAACTGTAGCCAAGGGGAAGCTAGCTT
TAGTACCACGAGACTACAGATTATCCTCTGCTGCCAGCAAAGTCTAGTTTTCAAATGTAA
AGCTAGATAAATAAATCCATGGTTTTCATCACGTGCTTATATATCTAGCTATTACCCCCT
CTATCAACTAGTATATGTTAGATTGATCTCTTCTCCAATGGGCCCAACGACCCATTGGAC
CTTGACTCACGCCCTGATCGGGGGCGTCCAGCCCAAGTAAGGCTGGTGGGCCCCTGTCGC
ACGGTGCTATATGTAGAGGAGGTGGCGACCATGGCACGGGTTACGAGGTTCGCCGGCGCC
ACTGGTTCCCCACTCCTAACCCTAATCCGATCCAGAGGGATGCACTGAAGCGATGGGA